Lsi09G016480 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGATTTCTGGCTACCAATTGGAGTCCTCTTCCCTCTCTGCCGCCACGGCTCCTCACAACTGGGCGGCGTTCGACCGACTAGTGGCGTCGCAGCTCAATGGCCAAATCGAAGTATCCAACATGATTTATTACAGTGATCAATTGCCAACTCCAACACTACGCGGAACGACATCGTTTTCATCTAAATCTTCATCTTCTTCTTACAACGCCGCCGCCATAGCCGCCTCTCAAGATTACAACAACGTCGACACAGAGCTATGGAGCTTTGCCAGGTTGTCGTCTACTGACCCATTATGCCACGTGTCCGACACTCCCATATAA ATGATGATTTCTGGCTACCAATTGGAGTCCTCTTCCCTCTCTGCCGCCACGGCTCCTCACAACTGGGCGGCGTTCGACCGACTAGTGGCGTCGCAGCTCAATGGCCAAATCGAAGTATCCAACATGATTTATTACAGTGATCAATTGCCAACTCCAACACTACGCGGAACGACATCGTTTTCATCTAAATCTTCATCTTCTTCTTACAACGCCGCCGCCATAGCCGCCTCTCAAGATTACAACAACGTCGACACAGAGCTATGGAGCTTTGCCAGGTTGTCGTCTACTGACCCATTATGCCACGTGTCCGACACTCCCATATAA ATGATGATTTCTGGCTACCAATTGGAGTCCTCTTCCCTCTCTGCCGCCACGGCTCCTCACAACTGGGCGGCGTTCGACCGACTAGTGGCGTCGCAGCTCAATGGCCAAATCGAAGTATCCAACATGATTTATTACAGTGATCAATTGCCAACTCCAACACTACGCGGAACGACATCGTTTTCATCTAAATCTTCATCTTCTTCTTACAACGCCGCCGCCATAGCCGCCTCTCAAGATTACAACAACGTCGACACAGAGCTATGGAGCTTTGCCAGGTTGTCGTCTACTGACCCATTATGCCACGTGTCCGACACTCCCATATAA MMISGYQLESSSLSAATAPHNWAAFDRLVASQLNGQIEVSNMIYYSDQLPTPTLRGTTSFSSKSSSSSYNAAAIAASQDYNNVDTELWSFARLSSTDPLCHVSDTPI
BLAST of Lsi09G016480 vs. TrEMBL
Match: A0A0A0KDU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107870 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 1.7e-39 Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 1
BLAST of Lsi09G016480 vs. TrEMBL
Match: M5X7Y1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020746mg PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.7e-10 Identity = 54/103 (52.43%), Postives = 62/103 (60.19%), Query Frame = 1
BLAST of Lsi09G016480 vs. TrEMBL
Match: A0A0H3VAS8_9ROSA (NAC2 transcription factor OS=Eriobotrya japonica GN=NAC2 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-08 Identity = 50/113 (44.25%), Postives = 61/113 (53.98%), Query Frame = 1
BLAST of Lsi09G016480 vs. TrEMBL
Match: A0A061E007_THECC (Transcription factor OS=Theobroma cacao GN=TCM_005047 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-07 Identity = 49/105 (46.67%), Postives = 56/105 (53.33%), Query Frame = 1
BLAST of Lsi09G016480 vs. TrEMBL
Match: V7ASW2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G118700g PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.3e-07 Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 1
BLAST of Lsi09G016480 vs. NCBI nr
Match: gi|659119618|ref|XP_008459751.1| (PREDICTED: NAC domain-containing protein 43 [Cucumis melo]) HSP 1 Score: 173.7 bits (439), Expect = 1.7e-40 Identity = 94/111 (84.68%), Postives = 101/111 (90.99%), Query Frame = 1
BLAST of Lsi09G016480 vs. NCBI nr
Match: gi|778712161|ref|XP_011656855.1| (PREDICTED: NAC domain-containing protein 43 [Cucumis sativus]) HSP 1 Score: 169.9 bits (429), Expect = 2.5e-39 Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 1
BLAST of Lsi09G016480 vs. NCBI nr
Match: gi|645254472|ref|XP_008233055.1| (PREDICTED: NAC domain-containing protein 43 [Prunus mume]) HSP 1 Score: 76.6 bits (187), Expect = 2.9e-11 Identity = 53/103 (51.46%), Postives = 62/103 (60.19%), Query Frame = 1
BLAST of Lsi09G016480 vs. NCBI nr
Match: gi|596054833|ref|XP_007220855.1| (hypothetical protein PRUPE_ppa020746mg [Prunus persica]) HSP 1 Score: 73.6 bits (179), Expect = 2.4e-10 Identity = 54/103 (52.43%), Postives = 62/103 (60.19%), Query Frame = 1
BLAST of Lsi09G016480 vs. NCBI nr
Match: gi|502170842|ref|XP_004514929.1| (PREDICTED: NAC domain-containing protein 43-like [Cicer arietinum]) HSP 1 Score: 70.5 bits (171), Expect = 2.0e-09 Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |