Lsi09G016450 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACTCTCTCTTCAACAACCCTTTCACCACATCTCCCTTCAATTTTACAATTCAAGTAAGTATATATTCATTCAATTCTTGTCAAGATAACTACAAGATTAATTAATATTATTGTTTCTTGCAAATTCTTTTAATTAATTACACTTTCATTCTTTTTCTTTTTTCCATTTTTAGGGATTGGTCAACAACTCTCTCGTGATTTGCAATTGCAACCTTCAAGAGAGGAAGATGTAGGCAAAATTGACTATGGAATCTTTGCCTCAATTGATTCACAAGTGTTTAAACGAATTGCAACAGAGTTAGATCATGATTTCAATGGTAATAAATAAATATATATATATAATATATAATTTGAAAGAAAATTTTCTAAAATCTTGTGGTAATTTAATTTGTCTCAGCATTGATTACTGTAACGAATTCACAAGTGAAATTCACTTTTGAAGGTAGAGAGATAAGTACTCTTCACAAAGAGGTATATATAATCAATTCTTTTGCTTTCATTATTAATAATAAATACATTTGATGATTAGTGGTTGATAATTATGTTTTGTGCAGAGAAAAGAATGCATAATTGGAGGGCTTTCAGAGGGAGAAGAAGCTCGATTCTTAGTGTACTTAGAGCCCACAATTTTTTTTCGTGGTGTGGTTTATCAGTCAAAAAGGATATGGATATTCAAGTCTCCTAATTCCTCTAGTATAATTGTTGCTCCTATTGAATTGTATGCTCAATTTTGCGTCTATTTTTCCCAGTGAGGAAAATTCCAAGAGATAAAAATGTTTTAGATATGTTGATATCATTTTTTCTTCATCATAATAAAATTGAAATATCAACTATAACCATCTTTACACAATTTTTTCTCATAATATATTGTGTATCTTATGTATCTAGGTATTCTCAAATTGATTTTTATTTACAAATTATATAA ATGACACTCTCTCTTCAACAACCCTTTCACCACATCTCCCTTCAATTTTACAATTCAAGGATTGGTCAACAACTCTCTCGTGATTTGCAATTGCAACCTTCAAGAGAGGAAGATGTAGGCAAAATTGACTATGGAATCTTTGCCTCAATTGATTCACAAGTGTTTAAACGAATTGCAACAGAGTTAGATCATGATTTCAATGCATTGATTACTGTAACGAATTCACAAGTGAAATTCACTTTTGAAGGTAGAGAGATAAGTACTCTTCACAAAGAGAGAAAAGAATGCATAATTGGAGGGCTTTCAGAGGGAGAAGAAGCTCGATTCTTAGTGTACTTAGAGCCCACAATTTTTTTTCGTGGTGTGGTTTATCAGTCAAAAAGGATATGGATATTCAAGTCTCCTAATTCCTCTAGTATAATTGTTGCTCCTATTGAATTGTATGCTCAATTTTGCGTCTATTTTTCCCAGTATTCTCAAATTGATTTTTATTTACAAATTATATAA ATGACACTCTCTCTTCAACAACCCTTTCACCACATCTCCCTTCAATTTTACAATTCAAGGATTGGTCAACAACTCTCTCGTGATTTGCAATTGCAACCTTCAAGAGAGGAAGATGTAGGCAAAATTGACTATGGAATCTTTGCCTCAATTGATTCACAAGTGTTTAAACGAATTGCAACAGAGTTAGATCATGATTTCAATGCATTGATTACTGTAACGAATTCACAAGTGAAATTCACTTTTGAAGGTAGAGAGATAAGTACTCTTCACAAAGAGAGAAAAGAATGCATAATTGGAGGGCTTTCAGAGGGAGAAGAAGCTCGATTCTTAGTGTACTTAGAGCCCACAATTTTTTTTCGTGGTGTGGTTTATCAGTCAAAAAGGATATGGATATTCAAGTCTCCTAATTCCTCTAGTATAATTGTTGCTCCTATTGAATTGTATGCTCAATTTTGCGTCTATTTTTCCCAGTATTCTCAAATTGATTTTTATTTACAAATTATATAA MTLSLQQPFHHISLQFYNSRIGQQLSRDLQLQPSREEDVGKIDYGIFASIDSQVFKRIATELDHDFNALITVTNSQVKFTFEGREISTLHKERKECIIGGLSEGEEARFLVYLEPTIFFRGVVYQSKRIWIFKSPNSSSIIVAPIELYAQFCVYFSQYSQIDFYLQII
BLAST of Lsi09G016450 vs. TrEMBL
Match: A0A0A0KCY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002350 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.0e-41 Identity = 96/158 (60.76%), Postives = 117/158 (74.05%), Query Frame = 1
BLAST of Lsi09G016450 vs. TrEMBL
Match: A0A0A0K9W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002330 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.1e-19 Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 1
BLAST of Lsi09G016450 vs. TrEMBL
Match: A0A0A0LLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G154090 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 9.1e-19 Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 1
BLAST of Lsi09G016450 vs. TrEMBL
Match: A0A0A0KNE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G469020 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17 Identity = 49/132 (37.12%), Postives = 83/132 (62.88%), Query Frame = 1
BLAST of Lsi09G016450 vs. TrEMBL
Match: A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.9e-17 Identity = 53/143 (37.06%), Postives = 88/143 (61.54%), Query Frame = 1
BLAST of Lsi09G016450 vs. NCBI nr
Match: gi|700190437|gb|KGN45641.1| (hypothetical protein Csa_6G002350 [Cucumis sativus]) HSP 1 Score: 177.9 bits (450), Expect = 1.4e-41 Identity = 96/158 (60.76%), Postives = 117/158 (74.05%), Query Frame = 1
BLAST of Lsi09G016450 vs. NCBI nr
Match: gi|659117581|ref|XP_008458677.1| (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]) HSP 1 Score: 177.9 bits (450), Expect = 1.4e-41 Identity = 99/165 (60.00%), Postives = 119/165 (72.12%), Query Frame = 1
BLAST of Lsi09G016450 vs. NCBI nr
Match: gi|659128753|ref|XP_008464355.1| (PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]) HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19 Identity = 58/162 (35.80%), Postives = 90/162 (55.56%), Query Frame = 1
BLAST of Lsi09G016450 vs. NCBI nr
Match: gi|700190435|gb|KGN45639.1| (hypothetical protein Csa_6G002330 [Cucumis sativus]) HSP 1 Score: 102.8 bits (255), Expect = 5.9e-19 Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 1
BLAST of Lsi09G016450 vs. NCBI nr
Match: gi|778674138|ref|XP_011650141.1| (PREDICTED: uncharacterized protein LOC101209763 [Cucumis sativus]) HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18 Identity = 57/156 (36.54%), Postives = 91/156 (58.33%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |