Lsi09G016620 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTCGGGAAACGCCTCAAGCAGCAAATCGAGGACACATTGCCCGATTGGCGCGACAAATTCCTCTCTTACAAGGATTTGAAGAAACTCGTTCGTCTTGTCTCAGGTAACATTGATGTCAATGCCGATGCAAAATTTGTTTGCTTGTTGAACTCCGAGATTGATAAGTTCAATTCCTTTTTCATGGAGCAAGAGGAAGATTTAGTGATCCGCCATCGGGTGAGTCTTCTTTCGTTGTGTTTGAAGTCTTGA ATGAAGTTCGGGAAACGCCTCAAGCAGCAAATCGAGGACACATTGCCCGATTGGCGCGACAAATTCCTCTCTTACAAGGATTTGAAGAAACTCGTTCGTCTTGTCTCAGGTAACATTGATGTCAATGCCGATGCAAAATTTGTTTGCTTGTTGAACTCCGAGATTGATAAGTTCAATTCCTTTTTCATGGAGCAAGAGGAAGATTTAGTGATCCGCCATCGGGTGAGTCTTCTTTCGTTGTGTTTGAAGTCTTGA ATGAAGTTCGGGAAACGCCTCAAGCAGCAAATCGAGGACACATTGCCCGATTGGCGCGACAAATTCCTCTCTTACAAGGATTTGAAGAAACTCGTTCGTCTTGTCTCAGGTAACATTGATGTCAATGCCGATGCAAAATTTGTTTGCTTGTTGAACTCCGAGATTGATAAGTTCAATTCCTTTTTCATGGAGCAAGAGGAAGATTTAGTGATCCGCCATCGGGTGAGTCTTCTTTCGTTGTGTTTGAAGTCTTGA MKFGKRLKQQIEDTLPDWRDKFLSYKDLKKLVRLVSGNIDVNADAKFVCLLNSEIDKFNSFFMEQEEDLVIRHRVSLLSLCLKS
BLAST of Lsi09G016620 vs. Swiss-Prot
Match: SPX5_ORYSJ (SPX domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=SPX5 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 5.9e-20 Identity = 46/74 (62.16%), Postives = 63/74 (85.14%), Query Frame = 1
BLAST of Lsi09G016620 vs. Swiss-Prot
Match: SPX5_ORYSI (SPX domain-containing protein 5 OS=Oryza sativa subsp. indica GN=SPX5 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 5.9e-20 Identity = 46/74 (62.16%), Postives = 63/74 (85.14%), Query Frame = 1
BLAST of Lsi09G016620 vs. Swiss-Prot
Match: SPX3_ORYSJ (SPX domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=SPX3 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.0e-19 Identity = 49/79 (62.03%), Postives = 64/79 (81.01%), Query Frame = 1
BLAST of Lsi09G016620 vs. Swiss-Prot
Match: SPX3_ORYSI (SPX domain-containing protein 3 OS=Oryza sativa subsp. indica GN=SPX3 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.0e-19 Identity = 49/79 (62.03%), Postives = 64/79 (81.01%), Query Frame = 1
BLAST of Lsi09G016620 vs. Swiss-Prot
Match: SPX6_ORYSJ (SPX domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=SPX6 PE=2 SV=2) HSP 1 Score: 91.3 bits (225), Expect = 5.5e-18 Identity = 44/74 (59.46%), Postives = 59/74 (79.73%), Query Frame = 1
BLAST of Lsi09G016620 vs. TrEMBL
Match: A0A0A0KAQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108460 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 9.8e-30 Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 1
BLAST of Lsi09G016620 vs. TrEMBL
Match: B9MUW5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s06020g PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 5.2e-23 Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 1
BLAST of Lsi09G016620 vs. TrEMBL
Match: W9QP50_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020896 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 6.8e-23 Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 1
BLAST of Lsi09G016620 vs. TrEMBL
Match: A0A067KAG5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14570 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 6.8e-23 Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 1
BLAST of Lsi09G016620 vs. TrEMBL
Match: B9RD64_RICCO (Xenotropic and polytropic murine leukemia virus receptor, putative OS=Ricinus communis GN=RCOM_1610280 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.0e-22 Identity = 58/81 (71.60%), Postives = 69/81 (85.19%), Query Frame = 1
BLAST of Lsi09G016620 vs. TAIR10
Match: AT2G45130.1 (AT2G45130.1 SPX domain gene 3) HSP 1 Score: 91.3 bits (225), Expect = 3.1e-19 Identity = 42/74 (56.76%), Postives = 58/74 (78.38%), Query Frame = 1
BLAST of Lsi09G016620 vs. TAIR10
Match: AT2G26660.1 (AT2G26660.1 SPX domain gene 2) HSP 1 Score: 81.6 bits (200), Expect = 2.5e-16 Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 1
BLAST of Lsi09G016620 vs. TAIR10
Match: AT5G20150.1 (AT5G20150.1 SPX domain gene 1) HSP 1 Score: 76.6 bits (187), Expect = 7.9e-15 Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 1
BLAST of Lsi09G016620 vs. TAIR10
Match: AT5G15330.1 (AT5G15330.1 SPX domain gene 4) HSP 1 Score: 65.9 bits (159), Expect = 1.4e-11 Identity = 40/110 (36.36%), Postives = 54/110 (49.09%), Query Frame = 1
BLAST of Lsi09G016620 vs. NCBI nr
Match: gi|449445475|ref|XP_004140498.1| (PREDICTED: SPX domain-containing protein 3 [Cucumis sativus]) HSP 1 Score: 137.1 bits (344), Expect = 1.4e-29 Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 1
BLAST of Lsi09G016620 vs. NCBI nr
Match: gi|659119595|ref|XP_008459739.1| (PREDICTED: SPX domain-containing protein 3 [Cucumis melo]) HSP 1 Score: 130.2 bits (326), Expect = 1.7e-27 Identity = 65/77 (84.42%), Postives = 69/77 (89.61%), Query Frame = 1
BLAST of Lsi09G016620 vs. NCBI nr
Match: gi|566202859|ref|XP_006375297.1| (hypothetical protein POPTR_0014s06020g [Populus trichocarpa]) HSP 1 Score: 114.8 bits (286), Expect = 7.4e-23 Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 1
BLAST of Lsi09G016620 vs. NCBI nr
Match: gi|802700173|ref|XP_012083629.1| (PREDICTED: SPX domain-containing protein 3 [Jatropha curcas]) HSP 1 Score: 114.4 bits (285), Expect = 9.7e-23 Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 1
BLAST of Lsi09G016620 vs. NCBI nr
Match: gi|703070935|ref|XP_010088906.1| (hypothetical protein L484_020896 [Morus notabilis]) HSP 1 Score: 114.4 bits (285), Expect = 9.7e-23 Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |