Lsi09G019430 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGATCCTCATTCATTTTTGTCAATGAAAAATCAAAGTAGATCTAATAAAGAATACAAAAGTCAAACGCGATGTTTAATAAGATAAGCCGATAAACAGAATAACGTAACGATTGAATGATTTCACGCCTTCTTGCACAATGATATACCATGAAAATATTTGTAAATATCCATAATAGAAGCTTGAGAATTACCGAATTCGTCCACTCACATTAATTAACTCGAATTGAGCTTCATTTTCACTTGCGAAGAACCAGAAAGTGGTTTGCCGAATTTTGGCAACCAATATGAGCAAGAAGAAGGTTCTGGTAGTGGGCGGCACAGGTTACTTAGGTCAGCATCTTCTATCAGGATTTTCGGAGATCGATGGATTTCCATATGATATCGCGTTCACTTATCACTCATTTGCGCCTGAAGATTTGTTGGGAGCTCTTTCTCATCTACCTGCATTTCAAGTTGATTTAAAATCTGGTCAAGGATTCGATACCATTGCTGAGAAATTTGGCCAGGTTTGCCTCTGCCTTTTGCCGATTGATGTTGTAGTTTAGTTTGTTTTTGACAACTGTAATGCTCGGAGATGTTATTGTAGAATCGTTGATTCTTGTTGCTTGAACTTATTGCTGAAATAAGATTTCAATTACCAGCCCGATATTGTTGTTAATTGTGCTGCTATCTCTGTCCCTCGTGCCTGCGAAACATACCCTGTTTCTGCATTGTCTATCAACGTGCCTACCGCCCTTGGAACTTGGCTGCTTAGTTTTGAAGGGAGGAATAGCCTTCTCATTCATCTATCAACTGATCAAGGTAACTTTCTGGTTTCTTTGTTATCCTTAATTTTTCTTTGCTTTAAGGTGTGTCTAATAGGCTTCTGCGCTTAACACGTCTATTCCATAGACCTCTGAGCCCGTCTGAAAGGCTGACTTATTCTTAAGTTCTCTTTCCAGCCAAAGATTCCAAAGCAGCGCCCTAGCAGTCATGGTCCACAGTGCCTTTCTTCGGTTCTTTAGCCTCCAACAAGTTAGATATAATCTGAAAATTCAGAGACCAAACTATTCATCCTTTTTGTTTATGCAACATTTTAAAATGTTTAGGACAAATAGATATAATGTACAAGTGTAAAGACCAAACTTGTCATTCGATCTTGTCTTTTCATTCTTAAGAATTATAATCTCAGTTCAGTTATTTAGGCGGCTTAATCTGAAGGTTTTGTTATTTTGAGTACAAGTAACCTGACAATCATCATTTACTATTTGCTTCCATCTTGTTGAGTGAAATTTCCATGATATATAAGATGCTGGGCTTTGTCTGTTTGAGGGAACATCTTTTTCATTCTTTATGATTGTTATAAATCAACTGGGTAGTGCATGATGTTATTTTCCCACCAGTTTATGAAGGCGTGAAATCATTCTATAAGGAAGAAGATGAAACCATTCCTGTGAATGTTTATGGGAAGTCAAAGCTAGCAGCTGAACAGTATGTTTCTGAGAAATTTTCTAACTTTGCAATCTTGAGATCTAGTATCATTTTTGGTCCTCAGACCATCTCACCTGTTCCTAAATCTCTTCCAGTTCAGGTAAGTGGTTATGCGTGTTATATCATATTTCTGCAATTTCCTGATACATTAATGCGTTTATAAACATTTTGAATTGTAAAGACAAGACAAGTATCTGCAAGTGCGCAATTATATCTGGCCATTTTAAAGACACCTAGTGGAAGGGAATTGTGTCACCGTCATTTTTGAATAAACATTAACTTATATAACCAACTAACTTAATTGATTATTTGTTTGCACAGTACAATAATGTTGTGATGGCCTTCTTGACTTATTTGTACATAGCAATTAATTTGTATGCATTTGATACAGTGGATTGATGCTACCTTGTCTAAAGGAAGTGAAGTTGAATTCTTTCATGATGAGTTTCGATGTCCTGTGTATGTCAAGGATGTCGTGAATGTCATCATAACATTGATTAAGACATGGATGTCAGGTACGGATTTTGTAGTCTTGCTGAATAACTTATTGTAGAATAAAAAACACGGTACATACAATGTATAGTTCGCCATTTTGTCACTTTCCTATGAAGTGATGAGAGGAACCTTCTCTTTTGAAATTGTTTTATCTTTGTTATTCTGATGGCATATAATGCATTGCATAATTGATAGTTGTTCAATCATCTTTCTCCTCAGTTGAGGCATGTTTGTATTTGTATTTCCTTTATTATATTAATTTAATTTCTTATTTGTTTGCGGTTATGAATGACTGAATTCCAGAGGGCAAGCAAATGCGATTGCTGTTAAATGTTGGTGGACCAAATCGTTTATCACGTGTTGAAATGGCAGAGACTGTCGCAGAAATTAGAGGGCACAAGAAATCATTGATCAAAAGAGTGTCTGCGTCATCAGTATGTTCGCCTCTTGATCTTCCATATATCTCTCAAAGCAGTATTTCTCATCGATCATATCATTCGGTATCAGTAAATGATGGTTGAATCCTCTCATTCATTTTCACCTCTTTAGAAATATTTTTCGATGGTACTTCTCTCCTGCCTGTCAAAAACTTAAAAACACTCGAACAGCCTAAATCCTTAAGCATTTTCCTTGGACAGGGTTTCAACTAATCAATCATACAACTCGTGATATGTCTAGTAACAGGCTACTTCTTCTTGTTGAATTCTTAAGGCAACTGACAAGTTCTCCTCTAGTCTATTGGGTAACATCGTTCAAAAGGAGAACTTGGGCTCTCAATGGGTGCTTGTGGTTAAGGCTCAAAGATGTTTGGAGATACCTCCTCCAAGCTCATGAGTTCAAACTTCAAACTCTTAGGCTTAACTTAAAATTTTGGTTGTATCTCGAGCCTGATCATAGGGTGGCAAACCTCCCGAGGATTAGAGACTATGAGCAGCAGAATACATGGAGTGGAGTCGTATACTCCAATTTTTTTTTAACAAAATGTGTGTGTGTGTGTGTATATTGTACTCGAATACTCCGTTTTATATAGTGCTGCTGCTGCTTTTAGTAGGTTAAAAAGATTGCAGATATTTTGGCAACTTTTCTTCGAGAAGATTCTTTTATTATATCCACTTTTGATTTGAGTTTTCACTTGAATGTTTCAGATCGATCGAGGTGCAAAATCTCCTGCCGATATTTCAATGAACATTAGTAAACTGGTCGAGTTACTTGCCATTTCTCCTGTTTCATTCACTGATGGTGTCAGATTGACACTTGCAGCCGAGACTACAGAGTGATTTGCATTGGACATTGTAATGATATGCAATACATCCACTGCTGCTTTGGTTTTGAAGGCTCAATGACACAAATTTGGTTATTATAGTCTGTAAACTGCTTCAGCAAATTAATCAATCAAGATTCTAAGAATTTCTATTCA TTGATCCTCATTCATTTTTGTCAATGAAAAATCAAAGTAGATCTAATAAAGAATACAAAAGTCAAACGCGATGTTTAATAAGATAAGCCGATAAACAGAATAACGTAACGATTGAATGATTTCACGCCTTCTTGCACAATGATATACCATGAAAATATTTGTAAATATCCATAATAGAAGCTTGAGAATTACCGAATTCGTCCACTCACATTAATTAACTCGAATTGAGCTTCATTTTCACTTGCGAAGAACCAGAAAGTGGTTTGCCGAATTTTGGCAACCAATATGAGCAAGAAGAAGGTTCTGGTAGTGGGCGGCACAGGTTACTTAGGTCAGCATCTTCTATCAGGATTTTCGGAGATCGATGGATTTCCATATGATATCGCGTTCACTTATCACTCATTTGCGCCTGAAGATTTGTTGGGAGCTCTTTCTCATCTACCTGCATTTCAAGTTGATTTAAAATCTGGTCAAGGATTCGATACCATTGCTGAGAAATTTGGCCAGCCCGATATTGTTGTTAATTGTGCTGCTATCTCTGTCCCTCGTGCCTGCGAAACATACCCTGTTTCTGCATTGTCTATCAACGTGCCTACCGCCCTTGGAACTTGGCTGCTTAGTTTTGAAGGGAGGAATAGCCTTCTCATTCATCTATCAACTGATCAAGGCGTGAAATCATTCTATAAGGAAGAAGATGAAACCATTCCTGTGAATGTTTATGGGAAGTCAAAGCTAGCAGCTGAACAGTATGTTTCTGAGAAATTTTCTAACTTTGCAATCTTGAGATCTAGTATCATTTTTGGTCCTCAGACCATCTCACCTGTTCCTAAATCTCTTCCAGTTCAGTGGATTGATGCTACCTTGTCTAAAGGAAGTGAAGTTGAATTCTTTCATGATGAGTTTCGATGTCCTGTGTATGTCAAGGATGTCGTGAATGTCATCATAACATTGATTAAGACATGGATGTCAGAGGGCAAGCAAATGCGATTGCTGTTAAATGTTGGTGGACCAAATCGTTTATCACGTGTTGAAATGGCAGAGACTGTCGCAGAAATTAGAGGGCACAAGAAATCATTGATCAAAAGAGTGTCTGCGTCATCAGTATGTTCGCCTCTTGATCTTCCATATATCTCTCAAAGCAGTATTTCTCATCGATCATATCATTCGATCGATCGAGGTGCAAAATCTCCTGCCGATATTTCAATGAACATTAGTAAACTGGTCGAGTTACTTGCCATTTCTCCTGTTTCATTCACTGATGGTGTCAGATTGACACTTGCAGCCGAGACTACAGAGTGATTTGCATTGGACATTGTAATGATATGCAATACATCCACTGCTGCTTTGGTTTTGAAGGCTCAATGACACAAATTTGGTTATTATAGTCTGTAAACTGCTTCAGCAAATTAATCAATCAAGATTCTAAGAATTTCTATTCA ATGAGCAAGAAGAAGGTTCTGGTAGTGGGCGGCACAGGTTACTTAGGTCAGCATCTTCTATCAGGATTTTCGGAGATCGATGGATTTCCATATGATATCGCGTTCACTTATCACTCATTTGCGCCTGAAGATTTGTTGGGAGCTCTTTCTCATCTACCTGCATTTCAAGTTGATTTAAAATCTGGTCAAGGATTCGATACCATTGCTGAGAAATTTGGCCAGCCCGATATTGTTGTTAATTGTGCTGCTATCTCTGTCCCTCGTGCCTGCGAAACATACCCTGTTTCTGCATTGTCTATCAACGTGCCTACCGCCCTTGGAACTTGGCTGCTTAGTTTTGAAGGGAGGAATAGCCTTCTCATTCATCTATCAACTGATCAAGGCGTGAAATCATTCTATAAGGAAGAAGATGAAACCATTCCTGTGAATGTTTATGGGAAGTCAAAGCTAGCAGCTGAACAGTATGTTTCTGAGAAATTTTCTAACTTTGCAATCTTGAGATCTAGTATCATTTTTGGTCCTCAGACCATCTCACCTGTTCCTAAATCTCTTCCAGTTCAGTGGATTGATGCTACCTTGTCTAAAGGAAGTGAAGTTGAATTCTTTCATGATGAGTTTCGATGTCCTGTGTATGTCAAGGATGTCGTGAATGTCATCATAACATTGATTAAGACATGGATGTCAGAGGGCAAGCAAATGCGATTGCTGTTAAATGTTGGTGGACCAAATCGTTTATCACGTGTTGAAATGGCAGAGACTGTCGCAGAAATTAGAGGGCACAAGAAATCATTGATCAAAAGAGTGTCTGCGTCATCAGTATGTTCGCCTCTTGATCTTCCATATATCTCTCAAAGCAGTATTTCTCATCGATCATATCATTCGATCGATCGAGGTGCAAAATCTCCTGCCGATATTTCAATGAACATTAGTAAACTGGTCGAGTTACTTGCCATTTCTCCTGTTTCATTCACTGATGGTGTCAGATTGACACTTGCAGCCGAGACTACAGAGTGA MSKKKVLVVGGTGYLGQHLLSGFSEIDGFPYDIAFTYHSFAPEDLLGALSHLPAFQVDLKSGQGFDTIAEKFGQPDIVVNCAAISVPRACETYPVSALSINVPTALGTWLLSFEGRNSLLIHLSTDQGVKSFYKEEDETIPVNVYGKSKLAAEQYVSEKFSNFAILRSSIIFGPQTISPVPKSLPVQWIDATLSKGSEVEFFHDEFRCPVYVKDVVNVIITLIKTWMSEGKQMRLLLNVGGPNRLSRVEMAETVAEIRGHKKSLIKRVSASSVCSPLDLPYISQSSISHRSYHSIDRGAKSPADISMNISKLVELLAISPVSFTDGVRLTLAAETTE
BLAST of Lsi09G019430 vs. Swiss-Prot
Match: AGL14_HALVD (Probable low-salt glycan biosynthesis reductase Agl14 OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=agl14 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.8e-17 Identity = 77/277 (27.80%), Postives = 122/277 (44.04%), Query Frame = 1
BLAST of Lsi09G019430 vs. Swiss-Prot
Match: MAT2B_PONAB (Methionine adenosyltransferase 2 subunit beta OS=Pongo abelii GN=MAT2B PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.6e-15 Identity = 76/274 (27.74%), Postives = 122/274 (44.53%), Query Frame = 1
BLAST of Lsi09G019430 vs. Swiss-Prot
Match: MAT2B_HUMAN (Methionine adenosyltransferase 2 subunit beta OS=Homo sapiens GN=MAT2B PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.6e-15 Identity = 76/274 (27.74%), Postives = 122/274 (44.53%), Query Frame = 1
BLAST of Lsi09G019430 vs. Swiss-Prot
Match: MAT2B_MOUSE (Methionine adenosyltransferase 2 subunit beta OS=Mus musculus GN=Mat2b PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.9e-15 Identity = 83/332 (25.00%), Postives = 141/332 (42.47%), Query Frame = 1
BLAST of Lsi09G019430 vs. Swiss-Prot
Match: MAT2B_BOVIN (Methionine adenosyltransferase 2 subunit beta OS=Bos taurus GN=MAT2B PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.9e-15 Identity = 74/274 (27.01%), Postives = 123/274 (44.89%), Query Frame = 1
BLAST of Lsi09G019430 vs. TrEMBL
Match: A0A0A0KEJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G074000 PE=4 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 8.1e-152 Identity = 281/336 (83.63%), Postives = 296/336 (88.10%), Query Frame = 1
BLAST of Lsi09G019430 vs. TrEMBL
Match: A0A061DTI3_THECC (NAD(P)-binding Rossmann-fold superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_005395 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 7.4e-121 Identity = 228/339 (67.26%), Postives = 269/339 (79.35%), Query Frame = 1
BLAST of Lsi09G019430 vs. TrEMBL
Match: A0A0D2TC91_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G097000 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.5e-118 Identity = 225/338 (66.57%), Postives = 269/338 (79.59%), Query Frame = 1
BLAST of Lsi09G019430 vs. TrEMBL
Match: A0A067HE02_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020880mg PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 2.2e-117 Identity = 229/342 (66.96%), Postives = 266/342 (77.78%), Query Frame = 1
BLAST of Lsi09G019430 vs. TrEMBL
Match: V4TDE7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021196mg PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 2.2e-117 Identity = 229/342 (66.96%), Postives = 266/342 (77.78%), Query Frame = 1
BLAST of Lsi09G019430 vs. TAIR10
Match: AT4G00560.4 (AT4G00560.4 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 401.0 bits (1029), Expect = 7.4e-112 Identity = 210/340 (61.76%), Postives = 254/340 (74.71%), Query Frame = 1
BLAST of Lsi09G019430 vs. NCBI nr
Match: gi|659120406|ref|XP_008460177.1| (PREDICTED: methionine adenosyltransferase 2 subunit beta isoform X1 [Cucumis melo]) HSP 1 Score: 553.1 bits (1424), Expect = 3.3e-154 Identity = 288/340 (84.71%), Postives = 299/340 (87.94%), Query Frame = 1
BLAST of Lsi09G019430 vs. NCBI nr
Match: gi|449454474|ref|XP_004144979.1| (PREDICTED: bifunctional protein GAL10 isoform X2 [Cucumis sativus]) HSP 1 Score: 544.7 bits (1402), Expect = 1.2e-151 Identity = 281/336 (83.63%), Postives = 296/336 (88.10%), Query Frame = 1
BLAST of Lsi09G019430 vs. NCBI nr
Match: gi|778711029|ref|XP_011656672.1| (PREDICTED: bifunctional protein GAL10 isoform X1 [Cucumis sativus]) HSP 1 Score: 512.7 bits (1319), Expect = 4.9e-142 Identity = 261/295 (88.47%), Postives = 274/295 (92.88%), Query Frame = 1
BLAST of Lsi09G019430 vs. NCBI nr
Match: gi|659120408|ref|XP_008460178.1| (PREDICTED: methionine adenosyltransferase 2 subunit beta isoform X2 [Cucumis melo]) HSP 1 Score: 499.6 bits (1285), Expect = 4.3e-138 Identity = 252/275 (91.64%), Postives = 260/275 (94.55%), Query Frame = 1
BLAST of Lsi09G019430 vs. NCBI nr
Match: gi|590722429|ref|XP_007051892.1| (NAD(P)-binding Rossmann-fold superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 441.8 bits (1135), Expect = 1.1e-120 Identity = 228/339 (67.26%), Postives = 269/339 (79.35%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |