Lsi10G003590 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi10G003590
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr10 : 5592870 .. 5596013 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTGGTTTCATGGTTGATCTTTCTTAAGCTGACAACCTTTGATCCACAGCAAGACTTTAGAAAGAATTTCCGACAAGGGACTGGACCGACTTAGCCGCTGGAGATAATCTCGTGAATGAGATCATTGACTGTTTCATCGTCGGATCTAACGACCAGCTTCATTGCAACCTCCCTTGAAGCATCGAGACCAAATGAGAGACGGGCGAGTACTCTCACATTTCCAATGAATACACCAGATAGTAAACATGTGTGTGACCGCAGATTGCTTGGGACAACTTCTGTGCCCTGGGAAACAATGAAATGAAGAGGCAGAAAAACAGAAATTACATCTAATTTGAGGAGGAAGTAGAAACAATATACTTAGGCCTCATTTGATAAACATTTTGTTTATTAATGAAATATTTCTTATCCAAAATATATATATATACTTAGGCCTCATTTGATAAGCATTTTGTTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTTTGGGTTGGATAAAAAAGAGATAAGTGATATTGACTTGAACTTGGGTATTGCCCCTCCTTGTCCATCTGAAGACCAAAAAGACAACCTTAATGGCTGTGCTCCAAATTTCTGTAGCTTAAATAAATCAGATTCTGAGAGATCTGAGTTGATAATGGTGAGGCCATTTTCTGACATTGTTTATTCTTATTTCTGATTTCATTATCATTACTTTTTCAAATAATGTGTCTTTTGAGAAGTTTCTATGTTATTTCACCCATTATTTGGCTGGTTTTGATTTTTGAAGCTGTTTCTTTATGTTGCAGCTTCAAAACCATTCTTCTGTGGCTGTGAAAGCACAACCTTCTTTTATGACTTGTCCCAATTTCTTTCCTACCTACCAGGTATTTAAGTCTAAGACTGTTTTCCCATAATTTCTATGTTATTATTAATACATGGCTATAACAAAAAAAACTTCCTGAAGTTTGAAGTGTTTGCTAACAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTGAAAATTAAGTTTAGAATCACAAACCTATAGTTTTCTTACTTTTTTACCTACTTTTAAAACATGATTTCAAAAACCAAACCATATTATAAAACTTAAGAAAAGTAATTTCTGAATTTTGCTTAGAATCCACATAAGTTTTGAAGAAACATGGAAAACTTACCAAAAAAAATTTGTGTGGAAACAAGTATATTTTTTAAAACATAAAACCAAAAACAAAATGAGTATCAAAATTCTTGAGCAAATGAATAGGTTGACTTCTTTGGGCTGCAGGGGGAAAAGATATGAAACCAAAGGTAGGCCATGCACTCGAATAAGTTCAGCATTCATTTTTAACATTGACTCATAAAAAGCACCCAAGTTGCTAAAGTTGTTACCATGCAACTAAAATAGTATTATTAATTGTCACCCGTTCAGAAAAACATGGTAAGAAGAAAAACCTTGAGCCGCCAATCACAGTTCATTTTCGAGATGACTTATTTTCCTTAAATGCCGATACATTAATTGTACTGTTCTATTATTCAGAAGAATTTCATAAGATGGAAATATTTATGCACGTACAAAATAAACCACATGCACATACCTCACAAGGTTGCATGCCTAGAAGGTCTATGACAGCACGCACAGCTTCAGCCAAGCTTCCCCTTGGACCTAATCCATATTCATCTACACGTTCACCATCTTCACCCATGCTTTCCCATGCATTCCTGAAGTTAGACACTGCTACTTTCAACATGTAATCTGCTGCGACCACCTCAACGTCCTCAAGCTGATATTCATCTTCAACACCATCATCCTCTGCCTCGCCAGTAGACGGATCAATCTTTTTCCAAAAAGGATAAAGGAGAAAAACAAGAAAATGAAAAAGAAAGATGGATCAGTCTAGAAAGATAACCCATGGTAGTTTATTTGAATGCTTAATTATTGATGAGAAAGTACATCTCTGAGCGCTTATGAGAACATTAAATTCTCTCCATACAAATGTGTTGTGGATGAGAAGAAGTTCTGATGGAAGAGTCAACATTTGGACATACGATATATAACTATAAATAGCAGCAGAAAATGTAAATTTGGTGTCTCAAAAACAAAAACGTCCATCTAACATCTGTACATTCATTCTTATCGTGAAATGCCATAATAGAACTCAAAAATCACGTCGATAACAAAGAACTAACGAAGACTTGCACAACAAAACGATTAAGCTTAAAGGAGAGATTAAGCTTTGTTCTAATTAATTAAAATACTTCATCAAAGAAGGATGCTGCACAATTTGAGAAATACGAAAAAAATCCTTACCTCTTTGACAATGAACTTCAACATATTTGAGAACTTCCCAACTGCAGCGACTCCATCTGGTTTCTCAAATGCCACAAAGGTTTGCCCGGGTGAATTGTAAGGAAGAGATCTGAGTGGCTTGGATACCACTTCCGAGAATTCCTCTGCTTCCGAGGCATCCACAATAACATTAACCTGCAGAGGCGGACAATATTACAAAAGCAATTTTCTAGGTGGTTCAACAAAAAGATGCACTTGATTTTAGGCATTACATTTTCTAGTAGCTGCTCAGGAATTGTATTCGTGCAGTTATATTGAAAGACAACGTGTCTATCAAAAATATGCTTGACAACATTGACAGCATACTCTGTTTCTGCCTCTGTAAGCTCCAAAGATGCGGATGACTGCAAGGACAACACAGAAGTTCCCAGAATAAAAACATGACACATTAGCATATAAGACTTTGAATGGCGAATGGAAGAACCTTGAAAAGCTTCCCAAAGTCAGCAAATTCTTCAATGGAGCGAAGCATCTTTTCATAAGCATCAACAGAAGAAGCAAGGGTAATGGGAGGAGCCCCAAGCCCATTCGATTTTTTACTACTGCCTTTCTTCTCAGCAAGTGGTAGGGATTTCATCTCCTTAGGTACAGAATCAAGATCAAACGGTTCTTCAGACGGTTCCTGTGCCCATATGCAATGA

mRNA sequence

ATGAACTTCATTGCAACCTCCCTTGAAGCATCGAGACCAAATGAGAGACGGGCGAGTACTCTCACATTTCCAATGAATACACCAGATAGTAAACATCTTCAAAACCATTCTTCTGTGGCTGTGAAAGCACAACCTTCTTTTATGACTTGTCCCAATTTCTTTCCTACCTACCAGCGACTCCATCTGGTTTCTCAAATGCCACAAAGGTTTGCCCGGACTTTGAATGGCGAATGGAAGAACCTTGAAAAGCTTCCCAAAGTCAGCAAATTCTTCAATGGAGCGAAGCATCTTTTCATAAGCATCAACAGAAGAAGCAAGGCAAGTGGTAGGGATTTCATCTCCTTAGGTACAGAATCAAGATCAAACGGTTCTTCAGACGGTTCCTGTGCCCATATGCAATGA

Coding sequence (CDS)

ATGAACTTCATTGCAACCTCCCTTGAAGCATCGAGACCAAATGAGAGACGGGCGAGTACTCTCACATTTCCAATGAATACACCAGATAGTAAACATCTTCAAAACCATTCTTCTGTGGCTGTGAAAGCACAACCTTCTTTTATGACTTGTCCCAATTTCTTTCCTACCTACCAGCGACTCCATCTGGTTTCTCAAATGCCACAAAGGTTTGCCCGGACTTTGAATGGCGAATGGAAGAACCTTGAAAAGCTTCCCAAAGTCAGCAAATTCTTCAATGGAGCGAAGCATCTTTTCATAAGCATCAACAGAAGAAGCAAGGCAAGTGGTAGGGATTTCATCTCCTTAGGTACAGAATCAAGATCAAACGGTTCTTCAGACGGTTCCTGTGCCCATATGCAATGA

Protein sequence

MNFIATSLEASRPNERRASTLTFPMNTPDSKHLQNHSSVAVKAQPSFMTCPNFFPTYQRLHLVSQMPQRFARTLNGEWKNLEKLPKVSKFFNGAKHLFISINRRSKASGRDFISLGTESRSNGSSDGSCAHMQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi10G003590.1Lsi10G003590.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi10G003590Bottle gourd (USVL1VR-Ls)lsilsiB021
Lsi10G003590Cucumber (Gy14) v1cgylsiB145
Lsi10G003590Cucumber (Gy14) v1cgylsiB394
Lsi10G003590Cucurbita maxima (Rimu)cmalsiB469
Lsi10G003590Cucurbita maxima (Rimu)cmalsiB507
Lsi10G003590Cucurbita maxima (Rimu)cmalsiB548
Lsi10G003590Cucurbita moschata (Rifu)cmolsiB454
Lsi10G003590Cucurbita moschata (Rifu)cmolsiB491
Lsi10G003590Cucurbita moschata (Rifu)cmolsiB533
Lsi10G003590Cucurbita pepo (Zucchini)cpelsiB195
Lsi10G003590Cucurbita pepo (Zucchini)cpelsiB220
Lsi10G003590Cucurbita pepo (Zucchini)cpelsiB589
Lsi10G003590Wild cucumber (PI 183967)cpilsiB091
Lsi10G003590Wild cucumber (PI 183967)cpilsiB501
Lsi10G003590Cucumber (Chinese Long) v2culsiB093
Lsi10G003590Cucumber (Chinese Long) v2culsiB491
Lsi10G003590Melon (DHL92) v3.5.1lsimeB050
Lsi10G003590Melon (DHL92) v3.5.1lsimeB064
Lsi10G003590Watermelon (Charleston Gray)lsiwcgB039
Lsi10G003590Watermelon (Charleston Gray)lsiwcgB057
Lsi10G003590Watermelon (97103) v1lsiwmB079
Lsi10G003590Watermelon (97103) v1lsiwmB084
Lsi10G003590Cucumber (Gy14) v2cgyblsiB086
Lsi10G003590Cucumber (Gy14) v2cgyblsiB458
Lsi10G003590Melon (DHL92) v3.6.1lsimedB052
Lsi10G003590Melon (DHL92) v3.6.1lsimedB068
Lsi10G003590Silver-seed gourdcarlsiB288
Lsi10G003590Silver-seed gourdcarlsiB808
Lsi10G003590Cucumber (Chinese Long) v3cuclsiB104
Lsi10G003590Cucumber (Chinese Long) v3cuclsiB526
Lsi10G003590Watermelon (97103) v2lsiwmbB043
Lsi10G003590Watermelon (97103) v2lsiwmbB056
Lsi10G003590Wax gourdlsiwgoB062
Lsi10G003590Wax gourdlsiwgoB080