Lsi10G008390 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G008390
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Isocitrate dehydrogenase, putative
Location	chr10 : 11962560 .. 11968100 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCCGTCGAGCATTTCCGATGATACGACGCTTCATCTCCCCCTGCCGGAGCCATTCTCGCCTCTCCAACGCCCGATCACTCACCTACATGCCCAGGCCCGGCGATGGAGATCCGCGCCCGGTCACTCTCATTCCCGGAGACGGAATTGGTCCTCTGGTGACTAACGCGGTGGAGCAAGTGATGGAGGCAATGCACGCTCCCGTCTATTTCGAGCGCTACGATGTCCATGGCTATATGAAGGAGATTCCTAGAGAGGTAATGGAGTCTGTTTTAAAAAATAAAGTGTGTTTGAAAGGCGGACTAATGACTCCGATGGGCGGCGGTGTTAGTTCACTCAATGTTCAACTCAGGAAGGAGCTGGACTTGTATGCCTCGCTTGTTAATTGTTTCAATTTCCCTGGATTGCCTACGCGTCATGAGAATGTTGATATCGTCGTCATTAGGGAGAATACGGAGGGTGAGTACTCTGGCCTCGAGCATGAGGTCGTTCCTGGTGTGGTTGAGAGCCTCAAGGTAATATACATAATTGTTAATTTCTGGTGATCTTCTGATTCTTTTGATCCATCTCCTGTTTGGAAATGGTATAGCTGATTTGTAAACAGTCCCTAATTTTGTGTTTTATGGCTCTGTTTCTGATTCTCTGATGATTCTCTTATCGATTAAAGTTAGGGAAAATGGTACGGATGACCCCTTTTCAGGGGTCAAAATCTGGCTGAGTTTCAAAAATTGCCTTGGGCTTATGTCAGTCGCGTGCGAAATTACCCAACATGCGCGAGTTTGCTCTCGGAAGAATTCAAACGAAGGAAAAAATCAAGGAAAAAGATTTGTAGAAAAATTATTGTATCTGATGAAGAATGAAAGGATGCGGCGGACATAAACACAGTTGACATAAGCAAAAGGCTATTTGTTTTAATTTGAATATTGGGTCAAATTTCAGCCTCCATGCAATTTGCCCTTGAAGTTATCGCTGTTTCATATTTAAAACACTATGGACTTATACACCTCATTGTTGATATGAAGCTATGAAACGAATCCTGCATTCCATTAACATTAATTTTTTCTTCGATTAGTTTCAATCTTTCTTAGGTTATTTTGTAGGATGGAAATGGAATCAATTGGACATACCAATAACATTTTTGTCGGAGTTTGTGAATGGGGTGTCATATTAGACTTGCTGATGTAATAACTCAACCTATATGAAATCTAAATTCCTCTATACTGCAATAATCCAAGTAGCGTACATGCTGTTATATAATCTCATCTGTTGAATCATACTCTCAATTTATCAATTATATTTCCTCTCTTCCTCATTTCCAATGCAGTAACCTGAAATATAGCCTGAATTACTGTAGGTGATCTCAAAATTCTCCTCGGAACGCATTGCTAAATATGCGTTTGAGTATGCTTATCTGAACAATAGAAAGAAAGTGACAGCAGTGCACAAAGCCAACATTATGAAACTTGCAGATGGCTTGTTTTTGGAGTCTTGCAGGGAAGTGGCAACCCAATACCCATGTATCCATTACAATGAGGTTATTGTTGACAACTGTTGCATGCAGCTTGTTTCAAAACCTGAGCAATTTGATGTAATGGTACGTAGCTTTCTAAGCTTATATTTGCTCCATTCAATGGTTCTTTCTTTTATGTCTTTAGTTATTATGGAACACTAGAGTCTCAGACAAGCTGTATACTGCTTTCTGGTCCCTGGCTAATGCTTCTTCCTCCTTTGGAAACTTGAGTCAAGAGGCAAAATGGTTCCAGCTTAATTATTGGGCCTACGGATTACTTTCTTGAGCACGAATTTAAATAGCATTTGTAGTTCATTCCTTGATATGCTAGGCAAGTCAATCCACTGTGATTGGTGATCAAAAAGGAACTTTGGTCAAAATCTCAACTAATTTAGGTCATGAGTCGAAAGCTCTGAGCTAAGAAGCACAGACACGGATATGAGACACTTACACGGACACGACACGTTCAAATAAATCAAAGCTTTACTAATAAGTCAGGGCGCTCCTGTCCCTAACCTAGGTTGAGCCCTTTTGAGATTCTTAGTCAAGCCTCAACGTCCTGCAATCTTTCTAAAGTGCTAACACTGTCGACTCTAATACGTCTTTATTAGAGTATTATCATCGACGGCTTTCGCGCACGTTGCAACATCCCTTGCTTGTTGCTTTCGAGCCCAAGCCTACGTTTGCTTAGTAAGTCAACTTAAGCTACGCGAAAGGTTCTATGCCAATTTTTTAAAAAAATGATTAAGATACGAGCACATTGTAGATACTCTCTTTATTATTATTATTATTATTATTAAAATACATACAAGTTTAACATAAAATACTAAATGCACTACACTAATAAAGTATAAAAATGCCCGGTTAATTAACAATTTAAGAGATAAAATGTTTAGGTTTCTAACTTCAATTTTTTATGTTTATGTTTTCTTTTTATCCTTGATTAAAAAAAATGGCTTTCCATTTTGTTTTTTCTTATCATAGTTTAACATATAATTTGATTTGATCTTTAAATTTGGGTCCAACTTAAAAGGTTGGACCACTTTTTCTTAAAAATAATTTTTAAAAGTGTTCCAAATCCCACCTGTCTGAAATTAAAAATAAATATTAAAATACGATACAAAAATTTGCAGTGTCGGACATTTTACTTAAAATGGAGTGTCCGTGCTTCATAGGCTACTTACTAAGAAAATTATTTCTTGCACTTTTGTTGATTGATTATATATGGTGTACATTTTGGTTTTACCTAAAATGGAGTGTCCGTGCTTCATAAGCTACGAATCCAAATTTCGTAGGAAAATTATTGGGGATACTAGTTCTCGTACAAATTTCTCAATTGATTAAGGTTATAGTGAAAAGTTGAGAATTATGGAAAATTATAACTCTCTGAAAATAATTAGCAGTGGCATTTGAACAGAAACCCAAATTCTTGGTGGGTTCCTTGTGCAAATTAGTTTGGGTCAGTTTTGCTGCCGTGTAATGTAATTTCGAATTGAAATGGAAGGTCATACCTGTTAAAAATAAAATAGTTATAACCTTAACTCTTCTGAAGCTTCTTTTTTACTAGTCTATACAAATATATTGATGGTAGGTATATATATATATATATATATATATTAGTTCTTCAAAATTATTACTTAGAAATTGTAAATATTTCAAAAGGGATTTAGAAATATCTTAGCTTTTAACATTTCTTGAGCTCCAAATTTCTTTTTCCGCAAATTTTTTCAGCAGTATAATGGGGCATGGATAGGTGATGAGTAACTACCATAGATGAACCTTATGAGTAATAAGGAATAATGTAAATAATACAAAGCTTAGGAGAACGAGTTAAAGTTATATTATTATAATGATTTTGCTTAACTTAAACTTATCTCAAGAGTTTACTGGTAAGAGTTTCCTTCACAAGTAAATGTAGGACATTAAGAGTAGACAATTGTCCCGTGAGATTAATAAATGTTTGCTGGCCTCTCATGATAGTCAGAGATGTAAAGAAAAAGAAAAAGAAAAAAAAATCGTGAATGAGTTTCAATTCATCTTTGCTTTGCTTAATGCTTCATTCTCTCTACTCCCCCCTCAGATTAAGTTAGTTCCTCTCTCCTCTCGAATGTTGATGCTTATATTTTTGCTTATTCTTTTTTAACCCAATGCCATTTTATGATCAATTTTTGCTAACAAAGTCTTTTAATTATTTGGATCAGGTGACTCCCAACCTTTATGGCAATCTAGTGGCAAACACTGCAGCTGGTATCGCCGGAGGCACTGGTTTCATGCCAGGAGGTATAATTACTACTATTCCATGTGTTTTAAGTCCCCATATGGTCATTGGGAAGAAGGATGCAGTTGAGTAGTGTGATCTAAGAGAGTTGGTATTTGGTTGAACTGATAATTGATTGATTACATGAATGAATACACAGGGAACGTGGGGTGTGATCATGCGATATTTGAACAAGGAGCTTCAGCAGGGAACGTGGGGAATGAGAAAATAGTGGAAGGGAAGAAGGCAAATCCAGTTGCTTTGTTGCTTTCATCGGCAATGATGCTGAGGCATCTTCAGTTTCCTTCTTTCGCTGATAGACTTGAGAGTGCTGTGAAACGTGTGATCATGGAGGAAAAGTGCAGAACTAAGGATCTTGGTGGAGACTCCACGACTCAAGACGTTGTTGATGCTGTCATTGCCTTTTTGGACTGACTCTCACATACTTTCATTTACCCTCCCACCTCCCAGGTTCTGTTTCTATTTATTTCATTCATTCATTCATTTAATTTAACTATCATTTCTTTTATTGTTATTAAAAACAAAAAAGAAAAATCCTTGTCAAAAAATGGTGGTTTTAATTGATGTTTTAGGGTGAGACTAGTTCTTTTAATAAAGGTTCCCCTCCAATTTTGGTTATGAATGTCCCGGAAATTGTAATATTGTTTTGCAATGTTGTGATATGGGTTGGTTAAATTTAATGTTATCATTTTTTTCTATTGGATATATTTTAAGAAATAGATCTCAAAAATGAATCTTTCACACTTTTTTTCTCTTCTCTTCTTTAATTTCAAACAAGGTGAGGTCGGTTTTTATGGATGAGGTTTATAATATTTTAACAAAGTGATTTCTAATAATTGAATTTGATCATTATGTTTTATGAAGAAATATAAATCTCATTTTATAATAAGATTCAAACATAAATATAAATCTCATTTTGTTGGATTGAATTACTAATGTTATTTTCTTGTTCTTGAATGGTTTTCTTAAATTCTTTTAGGTGTATGTGCTCTACTTTGAGTAAGGATCTTTTTTCTCTTTTAAATTTACTTCATGATTTCAATGATCAAAATAAACCTTCAGAAAAGAAAATTCAAAAGTTTCAAAGTAAAAAACCTTGGATCATCACCTGTTCCATGCTTTTATCCAACAACTTGATATAATGAAAAAAAAAACCCAAAAAGATGTTCATCCCTTCACCAAAATAAGTATAGCCAAAAAAAATATATAATTATTACTTCTAATCTTTTATCGGATCCAGCCTCGACATTAACTACGAATTATAGTTCTAAGATTTGATTGGTAGCAAGTGTAGAGGAGTGCTTTCAGTAATAGTAGAAAATTAAAATGATAGCAAATGAGCTAGTCTGGGAGTTAATTTTCTATATAACGGTATTTAAGAATAATAATATGAAGCTAACAAAATAAACCAATACCACTAATCTTGTGAATAACCAAACGAGTACAAGAAAACATACACAAGGGCAGCAATATAGAAGAGGTATAGAAATGAATTACTAGTACTCTAATCAGATGAGCCTCTTCCAGCATCAAAGACAAGGATCTAAACCAACAAGATACATTAAGATTATTATGCTACTGAAAATAAGTTCGCAGTTCATATACCACCATTCTATCCACAGGTTGAACAAATAGTTTCTGCAGTATGCTGTCCCCTCTTATTTATACTTTCATATTCTGCAATTAGCAGCTGGAAGGAAATGAGAACACTCATATCAGTAGTTACCACACAGGTGCTTAAAATTAGAC

mRNA sequence

ATGGCCGCCCGTCGAGCATTTCCGATGATACGACGCTTCATCTCCCCCTGCCGGAGCCATTCTCGCCTCTCCAACGCCCGATCACTCACCTACATGCCCAGGCCCGGCGATGGAGATCCGCGCCCGGTCACTCTCATTCCCGGAGACGGAATTGGTCCTCTGGTGACTAACGCGGTGGAGCAAGTGATGGAGGCAATGCACGCTCCCGTCTATTTCGAGCGCTACGATGTCCATGGCTATATGAAGGAGATTCCTAGAGAGGTAATGGAGTCTGTTTTAAAAAATAAAGTGTGTTTGAAAGGCGGACTAATGACTCCGATGGGCGGCGGTGTTAGTTCACTCAATGTTCAACTCAGGAAGGAGCTGGACTTGTATGCCTCGCTTGTTAATTGTTTCAATTTCCCTGGATTGCCTACGCGTCATGAGAATGTTGATATCGTCGTCATTAGGGAGAATACGGAGGGTGAGTACTCTGGCCTCGAGCATGAGGTCGTTCCTGGTGTGGTTGAGAGCCTCAAGGTGATCTCAAAATTCTCCTCGGAACGCATTGCTAAATATGCGTTTGAGTATGCTTATCTGAACAATAGAAAGAAAGTGACAGCAGTGCACAAAGCCAACATTATGAAACTTGCAGATGGCTTGTTTTTGGAGTCTTGCAGGGAAGTGGCAACCCAATACCCATGTATCCATTACAATGAGGTTATTGTTGACAACTGTTGCATGCAGCTTGTTTCAAAACCTGAGCAATTTGATGTAATGGTACAAACCCAAATTCTTGGTGGGTTCCTTGTGCAAATTAGTTTGGGTCAGTTTTGCTGCCGTCAGTATAATGGGGCATGGATAGGTGATGAGACATTAAGAGTAGACAATTGTCCCGTGAGATTAATAAATGTTTGCTGGCCTCTCATGATAGTCAGAGATGTGACTCCCAACCTTTATGGCAATCTAGTGGCAAACACTGCAGCTGGTATCGCCGGAGGCACTGGTTTCATGCCAGGAGGGAACGTGGGGTGTGATCATGCGATATTTGAACAAGGAGCTTCAGCAGGGAACGTGGGGAATGAGAAAATAGTGGAAGGGAAGAAGGCAAATCCAGTTGCTTTGTTGCTTTCATCGGCAATGATGCTGAGGCATCTTCAGTTTCCTTCTTTCGCTGATAGACTTGAGAGTGCTGTGAAACGTGTGATCATGGAGGAAAAGTGCAGAACTAAGGATCTTGGTGGAGACTCCACGACTCAAGACGTTGTTGATGCTGTCATTGCCTTTTTGGACTGACTCTCACATACTTTCATTTACCCTCCCACCTCCCAGGTGCTTAAAATTAGAC

Coding sequence (CDS)

ATGGCCGCCCGTCGAGCATTTCCGATGATACGACGCTTCATCTCCCCCTGCCGGAGCCATTCTCGCCTCTCCAACGCCCGATCACTCACCTACATGCCCAGGCCCGGCGATGGAGATCCGCGCCCGGTCACTCTCATTCCCGGAGACGGAATTGGTCCTCTGGTGACTAACGCGGTGGAGCAAGTGATGGAGGCAATGCACGCTCCCGTCTATTTCGAGCGCTACGATGTCCATGGCTATATGAAGGAGATTCCTAGAGAGGTAATGGAGTCTGTTTTAAAAAATAAAGTGTGTTTGAAAGGCGGACTAATGACTCCGATGGGCGGCGGTGTTAGTTCACTCAATGTTCAACTCAGGAAGGAGCTGGACTTGTATGCCTCGCTTGTTAATTGTTTCAATTTCCCTGGATTGCCTACGCGTCATGAGAATGTTGATATCGTCGTCATTAGGGAGAATACGGAGGGTGAGTACTCTGGCCTCGAGCATGAGGTCGTTCCTGGTGTGGTTGAGAGCCTCAAGGTGATCTCAAAATTCTCCTCGGAACGCATTGCTAAATATGCGTTTGAGTATGCTTATCTGAACAATAGAAAGAAAGTGACAGCAGTGCACAAAGCCAACATTATGAAACTTGCAGATGGCTTGTTTTTGGAGTCTTGCAGGGAAGTGGCAACCCAATACCCATGTATCCATTACAATGAGGTTATTGTTGACAACTGTTGCATGCAGCTTGTTTCAAAACCTGAGCAATTTGATGTAATGGTACAAACCCAAATTCTTGGTGGGTTCCTTGTGCAAATTAGTTTGGGTCAGTTTTGCTGCCGTCAGTATAATGGGGCATGGATAGGTGATGAGACATTAAGAGTAGACAATTGTCCCGTGAGATTAATAAATGTTTGCTGGCCTCTCATGATAGTCAGAGATGTGACTCCCAACCTTTATGGCAATCTAGTGGCAAACACTGCAGCTGGTATCGCCGGAGGCACTGGTTTCATGCCAGGAGGGAACGTGGGGTGTGATCATGCGATATTTGAACAAGGAGCTTCAGCAGGGAACGTGGGGAATGAGAAAATAGTGGAAGGGAAGAAGGCAAATCCAGTTGCTTTGTTGCTTTCATCGGCAATGATGCTGAGGCATCTTCAGTTTCCTTCTTTCGCTGATAGACTTGAGAGTGCTGTGAAACGTGTGATCATGGAGGAAAAGTGCAGAACTAAGGATCTTGGTGGAGACTCCACGACTCAAGACGTTGTTGATGCTGTCATTGCCTTTTTGGACTGA

Protein sequence

MAARRAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQVMEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKELDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCMQLVSKPEQFDVMVQTQILGGFLVQISLGQFCCRQYNGAWIGDETLRVDNCPVRLINVCWPLMIVRDVTPNLYGNLVANTAAGIAGGTGFMPGGNVGCDHAIFEQGASAGNVGNEKIVEGKKANPVALLLSSAMMLRHLQFPSFADRLESAVKRVIMEEKCRTKDLGGDSTTQDVVDAVIAFLD

Homology

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BLAST of Lsi10G008390 vs. Swiss-Prot
Match: IDH1_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsis thaliana GN=IDH1 PE=2 SV=2)

HSP 1 Score: 423.7 bits (1088), Expect = 2.4e-117
Identity = 209/266 (78.57%), Postives = 231/266 (86.84%), Query Frame = 1


Query: 9   MIRRFISPCRSHSRLSNA-----RSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQVM 68
           M RR ++  ++ +R +N      RS+TYMPRPGDG PR VTLIPGDGIGPLVTNAVEQVM
Sbjct: 1   MSRRSLTLLKNLARNANGSGIQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVM 60

Query: 69  EAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKELD 128
           EAMHAP++FE+YDVHG M  +P EVMES+ KNKVCLKGGL TP+GGGVSSLNVQLRKELD
Sbjct: 61  EAMHAPIFFEKYDVHGEMSRVPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELD 120

Query: 129 LYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSERI 188
           L+ASLVNCFN PGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLKVI+KF SERI
Sbjct: 121 LFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERI 180

Query: 189 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCMQL 248
           AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA +YP I YNE+IVDNCCMQL
Sbjct: 181 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQL 240

Query: 249 VSKPEQFDVMVQTQILGGFLVQISLG 270
           V+KPEQFDVMV   + G  +   + G
Sbjct: 241 VAKPEQFDVMVTPNLYGNLVANTAAG 266

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BLAST of Lsi10G008390 vs. Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=2 SV=2)

HSP 1 Score: 410.2 bits (1053), Expect = 2.7e-113
Identity = 201/267 (75.28%), Postives = 231/267 (86.52%), Query Frame = 1


Query: 3   ARRAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQV 62
           +R++F +++   S   S S++   RS+TYMPRPGDG PRPVTLIPGDG+GPLVTNAV+QV
Sbjct: 2   SRQSFSLLKNLRS-IASGSKIQT-RSVTYMPRPGDGKPRPVTLIPGDGVGPLVTNAVQQV 61

Query: 63  MEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKEL 122
           MEAMHAPVYFE ++VHG MK +P  ++ES+ KNKVCLKGGL TP+GGGVSSLNV LRKEL
Sbjct: 62  MEAMHAPVYFEPFEVHGDMKSLPEGLLESIKKNKVCLKGGLKTPVGGGVSSLNVNLRKEL 121

Query: 123 DLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSER 182
           DL+ASLVNCFN PGL +RHENVDIVVIRENTEGEY+GLEHEVVPGVVESLKVI+KF SER
Sbjct: 122 DLFASLVNCFNLPGLASRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 181

Query: 183 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCMQ 242
           IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESC+EVA +YP I YNE+IVDNCCMQ
Sbjct: 182 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYNEIIVDNCCMQ 241

Query: 243 LVSKPEQFDVMVQTQILGGFLVQISLG 270
           LV++PEQFDVMV   + G  +   + G
Sbjct: 242 LVARPEQFDVMVTPNLYGNLVANTAAG 266

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BLAST of Lsi10G008390 vs. Swiss-Prot
Match: IDH3_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsis thaliana GN=IDH3 PE=1 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.1e-111
Identity = 204/268 (76.12%), Postives = 228/268 (85.07%), Query Frame = 1


Query: 3   ARRAFPMIRRFIS-PCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQ 62
           ARR+  +  R ++ P    + LS  RS+TYMPRPGDG PR VTLIPGDGIGPLVT AVEQ
Sbjct: 2   ARRSVSIFNRLLANPPSPFTSLS--RSITYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQ 61

Query: 63  VMEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKE 122
           VMEAMHAPV+FERY+V G M+++P EV+ESV +NKVCLKGGL TP+GGGVSSLN+QLRKE
Sbjct: 62  VMEAMHAPVHFERYEVLGNMRKVPEEVIESVKRNKVCLKGGLATPVGGGVSSLNMQLRKE 121

Query: 123 LDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSE 182
           LD++ASLVNC N PGL TRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVI+KF SE
Sbjct: 122 LDIFASLVNCINVPGLVTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSE 181

Query: 183 RIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCM 242
           RIA+YAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA  Y  I YNE+IVDNCCM
Sbjct: 182 RIARYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKHYSGITYNEIIVDNCCM 241

Query: 243 QLVSKPEQFDVMVQTQILGGFLVQISLG 270
           QLV+KPEQFDVMV   + G  +   + G
Sbjct: 242 QLVAKPEQFDVMVTPNLYGNLIANTAAG 267

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BLAST of Lsi10G008390 vs. Swiss-Prot
Match: IDHB_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial OS=Dictyostelium discoideum GN=idhB PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.0e-64
Identity = 128/252 (50.79%), Postives = 173/252 (68.65%), Query Frame = 1


Query: 18  RSHSRLSNARSL-TYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQVMEAMHAPVYFERYD 77
           R+  + S++ S+  Y+        + VT+IPGDGIGP +T++V  V +A   P+ +E +D
Sbjct: 6   RTVVKASSSNSIRNYLGYTSGVQKKTVTVIPGDGIGPEITSSVMGVFQAAKVPIEWEIFD 65

Query: 78  VHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKELDLYASLVNCFNFPG 137
           + G  + I +E++ S+ +NKV LKG L T +  G  S N++LRK LDLYA +V C   PG
Sbjct: 66  ISGG-QPISQELIASITRNKVALKGPLYTEILSGSQSRNMELRKALDLYAHVVPCKQIPG 125

Query: 138 LPTRHENV--DIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSERIAKYAFEYAYLN 197
           +  RH++V  D VVIRENT+GEYSGLE  + PGVV+SLK+I+K +SERIA+YAFEYA  N
Sbjct: 126 ITARHDDVLVDFVVIRENTQGEYSGLEQVLTPGVVQSLKIITKEASERIARYAFEYAKAN 185

Query: 198 NRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCMQLVSKPEQFDVMV 257
            RKKVTAVHKANI K  DGLFL +C ++A +YP I +   I+DNCCMQLV  PEQ+DVMV
Sbjct: 186 GRKKVTAVHKANIQKQTDGLFLATCTQIAKEYPEIKFENTIIDNCCMQLVKSPEQYDVMV 245

Query: 258 QTQILGGFLVQI 267
              + G  +  I
Sbjct: 246 TPNLYGNIVSNI 256

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BLAST of Lsi10G008390 vs. Swiss-Prot
Match: IDHA_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostelium discoideum GN=idhA PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.7e-63
Identity = 121/227 (53.30%), Postives = 163/227 (71.81%), Query Frame = 1


Query: 43  VTLIPGDGIGPLVTNAVEQVMEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGG 102
           VTLIPGDGIGP ++ +V++V  A+ AP+ +E   V      I +EV+ES+ KNK+ LKG 
Sbjct: 26  VTLIPGDGIGPEISESVKRVFSAVKAPIEWETVVVDANTG-ISKEVIESISKNKIGLKGP 85

Query: 103 LMTPMGGGVSSLNVQLRKELDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEH 162
           + TP+G G  SLN+ LRK  +LYA++  C + PG  TR+ NV+ VV+RENTEGEYSG+E+
Sbjct: 86  ISTPIGTGHQSLNLGLRKTFNLYANIRPCLSIPGHKTRYNNVNTVVVRENTEGEYSGIEN 145

Query: 163 EVVPGVVESLKVISKFSSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREV 222
           + V GV +S+K+I+K +S RIA YAF+YA  N RKKVT +HKANIMK +DGLF++SCREV
Sbjct: 146 QPVKGVAQSIKIITKEASTRIAHYAFQYALANGRKKVTCIHKANIMKQSDGLFVKSCREV 205

Query: 223 ATQYPCIHYNEVIVDNCCMQLVSKPEQFDVMVQTQILGGFLVQISLG 270
           +T+YP I Y E+ +DN CMQLV  P Q DVMV   + G  +  +  G
Sbjct: 206 STRYPSIKYEELTIDNNCMQLVLDPNQMDVMVLPNLYGDIVSDLCAG 251

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BLAST of Lsi10G008390 vs. TrEMBL
Match: A0A0A0KCU2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G119390 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 2.6e-131
Identity = 233/269 (86.62%), Postives = 245/269 (91.08%), Query Frame = 1


Query: 1   MAARRAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVE 60
           MA    FP+IRR +   R +SRLS+ARSLTYMPRPGDGDPRPVT IPGDGIGPLVTNAVE
Sbjct: 1   MATGSTFPIIRRLVPCGRHYSRLSDARSLTYMPRPGDGDPRPVTFIPGDGIGPLVTNAVE 60

Query: 61  QVMEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRK 120
           QVMEAMHAP+YFERYDVHGYMKE+PREV+ES+LKNKVCLKGGLMTPMGGGVSSLNVQLRK
Sbjct: 61  QVMEAMHAPIYFERYDVHGYMKEVPREVIESILKNKVCLKGGLMTPMGGGVSSLNVQLRK 120

Query: 121 ELDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSS 180
           E DLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLKVISKFSS
Sbjct: 121 EFDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVISKFSS 180

Query: 181 ERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCC 240
           ERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA QYP I YNEVIVDNCC
Sbjct: 181 ERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAAQYPSIQYNEVIVDNCC 240

Query: 241 MQLVSKPEQFDVMVQTQILGGFLVQISLG 270
           MQLVSKPEQFDVMV   + G  +   + G
Sbjct: 241 MQLVSKPEQFDVMVTPNLYGNLVANTAAG 269

[Close]

BLAST of Lsi10G008390 vs. TrEMBL
Match: A0A078CED6_BRANA (BnaA01g02160D protein OS=Brassica napus GN=BnaA01g02160D PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 1.5e-126
Identity = 265/431 (61.48%), Postives = 306/431 (71.00%), Query Frame = 1


Query: 9   MIRRFISPCRSHSRLSNA-----RSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQVM 68
           M RR ++  ++ +R SNA     RS+TYMPRPGDG PR VTLIPGDGIGPLVTNAVEQVM
Sbjct: 1   MSRRSLTLLKNLARNSNASCIQTRSVTYMPRPGDGSPRAVTLIPGDGIGPLVTNAVEQVM 60

Query: 69  EAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKELD 128
           EAMHAP+YFE+YDVHG M  +P EVMES+ KNKVCLKGGL TP+GGGVSSLNVQLRKELD
Sbjct: 61  EAMHAPIYFEKYDVHGAMSRVPLEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELD 120

Query: 129 LYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSERI 188
           L+ASLVNCFN PGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLK      S +I
Sbjct: 121 LFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLK------SLKI 180

Query: 189 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCMQL 248
           + +   + +   R         N  +   G+ LES        P    N  ++   C + 
Sbjct: 181 SFFIESFDFDVTRS------LENSTRFVPGV-LESVESTTRFVPDAVENLKVITKFCSER 240

Query: 249 VSKPEQFDVMV------QTQILGGFLVQISLGQF--CCRQYNGAWIG--DETLRVDNCPV 308
           ++K   F+          T +    +++++ G F   CR+    + G     + VDNC +
Sbjct: 241 IAK-YAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGITYNEIIVDNCCM 300

Query: 309 RLINVCWPLMIVRDVTPNLYGNLVANTAAGIAGGTGFMPGGNVGCDHAIFEQGASAGNVG 368
           +L  V  P      VTPNLYGNLVANTAAGIAGGTG MPGGNVG DHA+FEQGASAGNVG
Sbjct: 301 QL--VAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVG 360

Query: 369 NEKIVEGKKANPVALLLSSAMMLRHLQFPSFADRLESAVKRVIMEEKCRTKDLGGDSTTQ 425
            +KIV   KANPVALLLSSAMMLRHLQFPSFADRLE+AVKRVI E KCRTKDLGG STTQ
Sbjct: 361 KDKIVRENKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGKCRTKDLGGQSTTQ 415

[Close]

BLAST of Lsi10G008390 vs. TrEMBL
Match: A0A078BYU6_BRANA (BnaC01g03290D protein OS=Brassica napus GN=BnaC01g03290D PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.6e-125
Identity = 255/431 (59.16%), Postives = 297/431 (68.91%), Query Frame = 1


Query: 3   ARRAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQV 62
           +RR+  +++       + S     RS+TYMPRPGDG PR VTLIPGDGIGPLVTNAVEQV
Sbjct: 2   SRRSLTLLKNLARNSNASSSCIQTRSVTYMPRPGDGSPRAVTLIPGDGIGPLVTNAVEQV 61

Query: 63  MEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKEL 122
           MEAMHAP+YFE+YDVHG M  +P EVMES+ KNKVCLKGGL TP+GGGVSSLNVQLRKEL
Sbjct: 62  MEAMHAPIYFEKYDVHGEMSRVPAEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKEL 121

Query: 123 DLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVIS-KFSSE 182
           DL+ASLVNCFN PGLPT+HENVDIVVIRENTEGEY+GLEHEVVPGVVESLK +   F  E
Sbjct: 122 DLFASLVNCFNLPGLPTKHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKSLEISFVIE 181

Query: 183 RIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCM 242
                     YL    +                 +ES +     +  +   +VI   C  
Sbjct: 182 SFDFDVTRRVYLEKTNRFVP------------CAVESFKSERCAHSVVESLKVITKFCSE 241

Query: 243 QLVSKPEQFDVMVQ----TQILGGFLVQISLGQF--CCRQYNGAWIG--DETLRVDNCPV 302
           ++     ++  +      T +    +++++ G F   CR+    + G     + VDNC +
Sbjct: 242 RIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGITYNEIIVDNCCM 301

Query: 303 RLINVCWPLMIVRDVTPNLYGNLVANTAAGIAGGTGFMPGGNVGCDHAIFEQGASAGNVG 362
           +L  V  P      VTPNLYGNLVANTAAGIAGGTG MPGGNVG DHA+FEQGASAGNVG
Sbjct: 302 QL--VAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVG 361

Query: 363 NEKIVEGKKANPVALLLSSAMMLRHLQFPSFADRLESAVKRVIMEEKCRTKDLGGDSTTQ 422
            +KIV   KANPVALLLSSAMMLRHLQFPSFADRLE+AVKRVI E  CRTKDLGG STTQ
Sbjct: 362 KDKIVRENKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGNCRTKDLGGQSTTQ 418

Query: 423 DVVDAVIAFLD 425
            VVDAVIA L+
Sbjct: 422 QVVDAVIANLE 418

[Close]

BLAST of Lsi10G008390 vs. TrEMBL
Match: A0A0D3A1T5_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 4.8e-125
Identity = 256/429 (59.67%), Postives = 301/429 (70.16%), Query Frame = 1


Query: 5   RAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQVME 64
           R+  +++       + S     RS+TYMPRPGDG PR VTLIPGDGIGPLVTNAVEQVME
Sbjct: 4   RSLTLLKNLARNSNASSSCIQTRSVTYMPRPGDGSPRAVTLIPGDGIGPLVTNAVEQVME 63

Query: 65  AMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKELDL 124
           AMHAP+YFE+YDVHG M  +P EVMES+ KNKVCLKGGL TP+GGGVSSLNVQLRKELDL
Sbjct: 64  AMHAPIYFEKYDVHGEMSRVPAEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELDL 123

Query: 125 YASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVIS-KFSSERI 184
           +ASLVNCFN PGLPT+HENVDIVVIRENTEGEY+GLEHEVVPGVVESLK +   F  E  
Sbjct: 124 FASLVNCFNLPGLPTKHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKRLEISFVIE-- 183

Query: 185 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCMQL 244
              +F++    + +  T        +   G+ LES       +  +   +VI   C  ++
Sbjct: 184 ---SFDFDVTRSLENTT--------RFVPGV-LESVELRRCAHSVVESLKVITKFCSERI 243

Query: 245 VSKPEQFDVMVQ----TQILGGFLVQISLGQF--CCRQYNGAWIG--DETLRVDNCPVRL 304
                ++  +      T +    +++++ G F   CR+    + G     + VDNC ++L
Sbjct: 244 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGITYNEIIVDNCCMQL 303

Query: 305 INVCWPLMIVRDVTPNLYGNLVANTAAGIAGGTGFMPGGNVGCDHAIFEQGASAGNVGNE 364
             V  P      VTPNLYGNLVANTAAGIAGGTG MPGGNVG DHA+FEQGASAGNVG +
Sbjct: 304 --VAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGKD 363

Query: 365 KIVEGKKANPVALLLSSAMMLRHLQFPSFADRLESAVKRVIMEEKCRTKDLGGDSTTQDV 424
           KIV   KANPVALLLSSAMMLRHLQFPSFADRLE+AVKRVI E  CRTKDLGG STTQ V
Sbjct: 364 KIVRENKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGNCRTKDLGGQSTTQQV 416

[Close]

BLAST of Lsi10G008390 vs. TrEMBL
Match: A0A103Y7P6_CYNCS (Isocitrate and isopropylmalate dehydrogenase family OS=Cynara cardunculus var. scolymus GN=Ccrd_017655 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 6.3e-125
Identity = 258/433 (59.58%), Postives = 307/433 (70.90%), Query Frame = 1


Query: 3   ARRAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQV 62
           A+R  P++++ +   RS S    +RS+TYMPRPGDG PR VTLIPGDGIGPLVT AVEQV
Sbjct: 2   AKRTLPILKQLLHQ-RSPSLSPLSRSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQV 61

Query: 63  MEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKEL 122
           M+AMHAP+YFE++DVHG MK  P EV+ES+ KNKVCLKGGL TPMGGGVSSLNVQLRKEL
Sbjct: 62  MDAMHAPIYFEKFDVHGDMKSFPTEVVESIKKNKVCLKGGLNTPMGGGVSSLNVQLRKEL 121

Query: 123 DLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVIS---KFS 182
           DLYASLVNCFN PGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLK I    K  
Sbjct: 122 DLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKPIKTKKKVE 181

Query: 183 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNC 242
             R+  +     +++                 D  F  S RE   ++  +   +VI   C
Sbjct: 182 FCRVMGFGVRMDFVS-------------FNTGDEKF--SSREYDLKFSILINWQVITKFC 241

Query: 243 CMQLVSKPEQFDVM----VQTQILGGFLVQISLGQFC--CRQYNGAW--IGDETLRVDNC 302
             ++     ++  +      T +    +++++ G F   CR+    +  I    + VDNC
Sbjct: 242 SERIAKYAFEYAYLNNRKTVTAVHKANIMKLADGLFLESCREIASKYPSIKYNEIIVDNC 301

Query: 303 PVRLINVCWPLMIVRDVTPNLYGNLVANTAAGIAGGTGFMPGGNVGCDHAIFEQGASAGN 362
            ++L++   P      VTPNLYGNLVANTAAGIAGGTG MPGGNVG DHA+FEQGASAGN
Sbjct: 302 CMQLVSK--PEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGN 361

Query: 363 VGNEKIVEGKKANPVALLLSSAMMLRHLQFPSFADRLESAVKRVIMEEKCRTKDLGGDST 422
           VG +KIV+ + ANPVALLLSSAMMLRHLQFPSFADRLE+AVKRVI E K RTKDLGG ST
Sbjct: 362 VGKQKIVDQRTANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGKTRTKDLGGKST 416

Query: 423 TQDVVDAVIAFLD 425
           TQ+VVDAVIA L+
Sbjct: 422 TQEVVDAVIANLE 416

[Close]

BLAST of Lsi10G008390 vs. TAIR10
Match: AT4G35260.1 (AT4G35260.1 isocitrate dehydrogenase 1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.3e-118
Identity = 209/266 (78.57%), Postives = 231/266 (86.84%), Query Frame = 1


Query: 9   MIRRFISPCRSHSRLSNA-----RSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQVM 68
           M RR ++  ++ +R +N      RS+TYMPRPGDG PR VTLIPGDGIGPLVTNAVEQVM
Sbjct: 1   MSRRSLTLLKNLARNANGSGIQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAVEQVM 60

Query: 69  EAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKELD 128
           EAMHAP++FE+YDVHG M  +P EVMES+ KNKVCLKGGL TP+GGGVSSLNVQLRKELD
Sbjct: 61  EAMHAPIFFEKYDVHGEMSRVPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELD 120

Query: 129 LYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSERI 188
           L+ASLVNCFN PGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLKVI+KF SERI
Sbjct: 121 LFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERI 180

Query: 189 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCMQL 248
           AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA +YP I YNE+IVDNCCMQL
Sbjct: 181 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNCCMQL 240

Query: 249 VSKPEQFDVMVQTQILGGFLVQISLG 270
           V+KPEQFDVMV   + G  +   + G
Sbjct: 241 VAKPEQFDVMVTPNLYGNLVANTAAG 266

[Close]

BLAST of Lsi10G008390 vs. TAIR10
Match: AT2G17130.1 (AT2G17130.1 isocitrate dehydrogenase subunit 2)

HSP 1 Score: 410.2 bits (1053), Expect = 1.5e-114
Identity = 201/267 (75.28%), Postives = 231/267 (86.52%), Query Frame = 1


Query: 3   ARRAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQV 62
           +R++F +++   S   S S++   RS+TYMPRPGDG PRPVTLIPGDG+GPLVTNAV+QV
Sbjct: 2   SRQSFSLLKNLRS-IASGSKIQT-RSVTYMPRPGDGKPRPVTLIPGDGVGPLVTNAVQQV 61

Query: 63  MEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKEL 122
           MEAMHAPVYFE ++VHG MK +P  ++ES+ KNKVCLKGGL TP+GGGVSSLNV LRKEL
Sbjct: 62  MEAMHAPVYFEPFEVHGDMKSLPEGLLESIKKNKVCLKGGLKTPVGGGVSSLNVNLRKEL 121

Query: 123 DLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSER 182
           DL+ASLVNCFN PGL +RHENVDIVVIRENTEGEY+GLEHEVVPGVVESLKVI+KF SER
Sbjct: 122 DLFASLVNCFNLPGLASRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSER 181

Query: 183 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCMQ 242
           IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESC+EVA +YP I YNE+IVDNCCMQ
Sbjct: 182 IAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYNEIIVDNCCMQ 241

Query: 243 LVSKPEQFDVMVQTQILGGFLVQISLG 270
           LV++PEQFDVMV   + G  +   + G
Sbjct: 242 LVARPEQFDVMVTPNLYGNLVANTAAG 266

[Close]

BLAST of Lsi10G008390 vs. TAIR10
Match: AT4G35650.1 (AT4G35650.1 isocitrate dehydrogenase III)

HSP 1 Score: 404.8 bits (1039), Expect = 6.4e-113
Identity = 204/268 (76.12%), Postives = 228/268 (85.07%), Query Frame = 1


Query: 3   ARRAFPMIRRFIS-PCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQ 62
           ARR+  +  R ++ P    + LS  RS+TYMPRPGDG PR VTLIPGDGIGPLVT AVEQ
Sbjct: 2   ARRSVSIFNRLLANPPSPFTSLS--RSITYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQ 61

Query: 63  VMEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKE 122
           VMEAMHAPV+FERY+V G M+++P EV+ESV +NKVCLKGGL TP+GGGVSSLN+QLRKE
Sbjct: 62  VMEAMHAPVHFERYEVLGNMRKVPEEVIESVKRNKVCLKGGLATPVGGGVSSLNMQLRKE 121

Query: 123 LDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSE 182
           LD++ASLVNC N PGL TRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVI+KF SE
Sbjct: 122 LDIFASLVNCINVPGLVTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSE 181

Query: 183 RIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCM 242
           RIA+YAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA  Y  I YNE+IVDNCCM
Sbjct: 182 RIARYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKHYSGITYNEIIVDNCCM 241

Query: 243 QLVSKPEQFDVMVQTQILGGFLVQISLG 270
           QLV+KPEQFDVMV   + G  +   + G
Sbjct: 242 QLVAKPEQFDVMVTPNLYGNLIANTAAG 267

[Close]

BLAST of Lsi10G008390 vs. TAIR10
Match: AT1G32480.1 (AT1G32480.1 isocitrate dehydrogenase IV)

HSP 1 Score: 253.4 bits (646), Expect = 2.4e-67
Identity = 135/224 (60.27%), Postives = 164/224 (73.21%), Query Frame = 1


Query: 40  PRPVTLIPGDGIGPLVTNAVEQVMEAMHAPVYFERYDVHGY-MKEIPREVMESVLKNKVC 99
           PRPVT+I  +     VTNAV QVM+AM APVYFE Y + G  M  +  EV++S+ KNKVC
Sbjct: 2   PRPVTVIDSN-----VTNAVHQVMDAMQAPVYFETYIIKGKNMNHLTWEVVDSIRKNKVC 61

Query: 100 LKGGLMTPMGGGVSSLNVQLRKELDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYS 159
           L G +   + GG        RKELDL+ASLV+CFN  G P+RHENVDIVVIRENTEGEY+
Sbjct: 62  LNGRVNNSLCGGA-------RKELDLFASLVDCFNLNGQPSRHENVDIVVIRENTEGEYA 121

Query: 160 GLEHEVVPGVVESLKV-ISKFSSERIAKYAFEYAYLNNRKKVTAVH-KANIMKLADGLFL 219
           G EHEVVPGV+ES +V ++KF S+RIAKYAFEYA+ + RKKVTAVH      KLAD  FL
Sbjct: 122 GREHEVVPGVIESFQVTMTKFWSDRIAKYAFEYAHFSKRKKVTAVHNNGKYEKLADAFFL 181

Query: 220 ESCREVATQYPCIHYNEVIVDNCCMQLVSKPEQFDVMVQTQILG 261
           ESC+EVA  YP I YNE+ ++NCC+QLV KPE+FDV+V   + G
Sbjct: 182 ESCQEVAKMYPNITYNEIGINNCCLQLVEKPERFDVIVTPNLYG 213

[Close]

BLAST of Lsi10G008390 vs. TAIR10
Match: AT5G03290.1 (AT5G03290.1 isocitrate dehydrogenase V)

HSP 1 Score: 236.9 bits (603), Expect = 2.3e-62
Identity = 118/235 (50.21%), Postives = 163/235 (69.36%), Query Frame = 1


Query: 40  PRPVTLIPGDGIGPLVTNAVEQVMEAMHAPVYFERYDVHGYMKE-----IPREVMESVLK 99
           P   TL PGDGIGP +  +V++V      P+ +E + V   +       +  E +ESV +
Sbjct: 43  PITATLFPGDGIGPEIAESVKKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLESVRR 102

Query: 100 NKVCLKGGLMTPMGGGVSSLNVQLRKELDLYASLVNCFNFPGLPTRHENVDIVVIRENTE 159
           NKV LKG + TP+G G  SLN+ LRKEL+LYA++  C++ PG  TR+++VD++ IRENTE
Sbjct: 103 NKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTE 162

Query: 160 GEYSGLEHEVVPGVVESLKVISKFSSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGL 219
           GEYSGLEH+VV GVVESLK+I++ +S R+A+YAF YA  + R++V+A+HKANIM+  DGL
Sbjct: 163 GEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFLYAKTHGRERVSAIHKANIMQKTDGL 222

Query: 220 FLESCREVATQYPCIHYNEVIVDNCCMQLVSKPEQFDVMVQTQILGGFLVQISLG 270
           FL+ CREVA +YP I Y EV++DNCCM LV  P  FDV+V   + G  +  +  G
Sbjct: 223 FLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAG 277

[Close]

BLAST of Lsi10G008390 vs. NCBI nr
Match: gi|659094689|ref|XP_008448192.1| (PREDICTED: isocitrate dehydrogenase [NAD])

HSP 1 Score: 490.3 bits (1261), Expect = 3.3e-135
Identity = 241/270 (89.26%), Postives = 251/270 (92.96%), Query Frame = 1


Query: 1   MAARRAFPMIRRFISPCRSH-SRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAV 60
           MAA   FP+IRR +SPC SH SRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAV
Sbjct: 1   MAAGFTFPIIRRLVSPCGSHYSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAV 60

Query: 61  EQVMEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLR 120
           EQVMEAMHAPVYFERYDVHGYMKE+PREV+ES+LKNKVCLKGGLMTPMGGGVSSLNVQLR
Sbjct: 61  EQVMEAMHAPVYFERYDVHGYMKEVPREVIESILKNKVCLKGGLMTPMGGGVSSLNVQLR 120

Query: 121 KELDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFS 180
           KE DLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLKVISKFS
Sbjct: 121 KEFDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVISKFS 180

Query: 181 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNC 240
           SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCRE+ATQYP I YNEVIVDNC
Sbjct: 181 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREIATQYPSIQYNEVIVDNC 240

Query: 241 CMQLVSKPEQFDVMVQTQILGGFLVQISLG 270
           CMQLVSKPEQFDVMV   + G  +   + G
Sbjct: 241 CMQLVSKPEQFDVMVTPNLYGNLVANTAAG 270

[Close]

BLAST of Lsi10G008390 vs. NCBI nr
Match: gi|778712653|ref|XP_004140058.2| (PREDICTED: isocitrate dehydrogenase [NAD])

HSP 1 Score: 476.9 bits (1226), Expect = 3.8e-131
Identity = 233/269 (86.62%), Postives = 245/269 (91.08%), Query Frame = 1


Query: 1   MAARRAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVE 60
           MA    FP+IRR +   R +SRLS+ARSLTYMPRPGDGDPRPVT IPGDGIGPLVTNAVE
Sbjct: 1   MATGSTFPIIRRLVPCGRHYSRLSDARSLTYMPRPGDGDPRPVTFIPGDGIGPLVTNAVE 60

Query: 61  QVMEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRK 120
           QVMEAMHAP+YFERYDVHGYMKE+PREV+ES+LKNKVCLKGGLMTPMGGGVSSLNVQLRK
Sbjct: 61  QVMEAMHAPIYFERYDVHGYMKEVPREVIESILKNKVCLKGGLMTPMGGGVSSLNVQLRK 120

Query: 121 ELDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSS 180
           E DLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLKVISKFSS
Sbjct: 121 EFDLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVISKFSS 180

Query: 181 ERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCC 240
           ERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA QYP I YNEVIVDNCC
Sbjct: 181 ERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAAQYPSIQYNEVIVDNCC 240

Query: 241 MQLVSKPEQFDVMVQTQILGGFLVQISLG 270
           MQLVSKPEQFDVMV   + G  +   + G
Sbjct: 241 MQLVSKPEQFDVMVTPNLYGNLVANTAAG 269

[Close]

BLAST of Lsi10G008390 vs. NCBI nr
Match: gi|674958094|emb|CDX75486.1| (BnaA01g02160D [Brassica napus])

HSP 1 Score: 461.1 bits (1185), Expect = 2.1e-126
Identity = 265/431 (61.48%), Postives = 306/431 (71.00%), Query Frame = 1


Query: 9   MIRRFISPCRSHSRLSNA-----RSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQVM 68
           M RR ++  ++ +R SNA     RS+TYMPRPGDG PR VTLIPGDGIGPLVTNAVEQVM
Sbjct: 1   MSRRSLTLLKNLARNSNASCIQTRSVTYMPRPGDGSPRAVTLIPGDGIGPLVTNAVEQVM 60

Query: 69  EAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKELD 128
           EAMHAP+YFE+YDVHG M  +P EVMES+ KNKVCLKGGL TP+GGGVSSLNVQLRKELD
Sbjct: 61  EAMHAPIYFEKYDVHGAMSRVPLEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKELD 120

Query: 129 LYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVISKFSSERI 188
           L+ASLVNCFN PGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLK      S +I
Sbjct: 121 LFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLK------SLKI 180

Query: 189 AKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCMQL 248
           + +   + +   R         N  +   G+ LES        P    N  ++   C + 
Sbjct: 181 SFFIESFDFDVTRS------LENSTRFVPGV-LESVESTTRFVPDAVENLKVITKFCSER 240

Query: 249 VSKPEQFDVMV------QTQILGGFLVQISLGQF--CCRQYNGAWIG--DETLRVDNCPV 308
           ++K   F+          T +    +++++ G F   CR+    + G     + VDNC +
Sbjct: 241 IAK-YAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGITYNEIIVDNCCM 300

Query: 309 RLINVCWPLMIVRDVTPNLYGNLVANTAAGIAGGTGFMPGGNVGCDHAIFEQGASAGNVG 368
           +L  V  P      VTPNLYGNLVANTAAGIAGGTG MPGGNVG DHA+FEQGASAGNVG
Sbjct: 301 QL--VAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVG 360

Query: 369 NEKIVEGKKANPVALLLSSAMMLRHLQFPSFADRLESAVKRVIMEEKCRTKDLGGDSTTQ 425
            +KIV   KANPVALLLSSAMMLRHLQFPSFADRLE+AVKRVI E KCRTKDLGG STTQ
Sbjct: 361 KDKIVRENKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGKCRTKDLGGQSTTQ 415

[Close]

BLAST of Lsi10G008390 vs. NCBI nr
Match: gi|674964662|emb|CDX69124.1| (BnaC01g03290D [Brassica napus])

HSP 1 Score: 457.6 bits (1176), Expect = 2.4e-125
Identity = 255/431 (59.16%), Postives = 297/431 (68.91%), Query Frame = 1


Query: 3   ARRAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQV 62
           +RR+  +++       + S     RS+TYMPRPGDG PR VTLIPGDGIGPLVTNAVEQV
Sbjct: 2   SRRSLTLLKNLARNSNASSSCIQTRSVTYMPRPGDGSPRAVTLIPGDGIGPLVTNAVEQV 61

Query: 63  MEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKEL 122
           MEAMHAP+YFE+YDVHG M  +P EVMES+ KNKVCLKGGL TP+GGGVSSLNVQLRKEL
Sbjct: 62  MEAMHAPIYFEKYDVHGEMSRVPAEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLRKEL 121

Query: 123 DLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVIS-KFSSE 182
           DL+ASLVNCFN PGLPT+HENVDIVVIRENTEGEY+GLEHEVVPGVVESLK +   F  E
Sbjct: 122 DLFASLVNCFNLPGLPTKHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKSLEISFVIE 181

Query: 183 RIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNCCM 242
                     YL    +                 +ES +     +  +   +VI   C  
Sbjct: 182 SFDFDVTRRVYLEKTNRFVP------------CAVESFKSERCAHSVVESLKVITKFCSE 241

Query: 243 QLVSKPEQFDVMVQ----TQILGGFLVQISLGQF--CCRQYNGAWIG--DETLRVDNCPV 302
           ++     ++  +      T +    +++++ G F   CR+    + G     + VDNC +
Sbjct: 242 RIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGITYNEIIVDNCCM 301

Query: 303 RLINVCWPLMIVRDVTPNLYGNLVANTAAGIAGGTGFMPGGNVGCDHAIFEQGASAGNVG 362
           +L  V  P      VTPNLYGNLVANTAAGIAGGTG MPGGNVG DHA+FEQGASAGNVG
Sbjct: 302 QL--VAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVG 361

Query: 363 NEKIVEGKKANPVALLLSSAMMLRHLQFPSFADRLESAVKRVIMEEKCRTKDLGGDSTTQ 422
            +KIV   KANPVALLLSSAMMLRHLQFPSFADRLE+AVKRVI E  CRTKDLGG STTQ
Sbjct: 362 KDKIVRENKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGNCRTKDLGGQSTTQ 418

Query: 423 DVVDAVIAFLD 425
            VVDAVIA L+
Sbjct: 422 QVVDAVIANLE 418

[Close]

BLAST of Lsi10G008390 vs. NCBI nr
Match: gi|976918892|gb|KVI04047.1| (Isocitrate and isopropylmalate dehydrogenase family [Cynara cardunculus var. scolymus])

HSP 1 Score: 455.7 bits (1171), Expect = 9.0e-125
Identity = 258/433 (59.58%), Postives = 307/433 (70.90%), Query Frame = 1


Query: 3   ARRAFPMIRRFISPCRSHSRLSNARSLTYMPRPGDGDPRPVTLIPGDGIGPLVTNAVEQV 62
           A+R  P++++ +   RS S    +RS+TYMPRPGDG PR VTLIPGDGIGPLVT AVEQV
Sbjct: 2   AKRTLPILKQLLHQ-RSPSLSPLSRSVTYMPRPGDGAPRTVTLIPGDGIGPLVTGAVEQV 61

Query: 63  MEAMHAPVYFERYDVHGYMKEIPREVMESVLKNKVCLKGGLMTPMGGGVSSLNVQLRKEL 122
           M+AMHAP+YFE++DVHG MK  P EV+ES+ KNKVCLKGGL TPMGGGVSSLNVQLRKEL
Sbjct: 62  MDAMHAPIYFEKFDVHGDMKSFPTEVVESIKKNKVCLKGGLNTPMGGGVSSLNVQLRKEL 121

Query: 123 DLYASLVNCFNFPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVIS---KFS 182
           DLYASLVNCFN PGLPTRHENVDIVVIRENTEGEY+GLEHEVVPGVVESLK I    K  
Sbjct: 122 DLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKPIKTKKKVE 181

Query: 183 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATQYPCIHYNEVIVDNC 242
             R+  +     +++                 D  F  S RE   ++  +   +VI   C
Sbjct: 182 FCRVMGFGVRMDFVS-------------FNTGDEKF--SSREYDLKFSILINWQVITKFC 241

Query: 243 CMQLVSKPEQFDVM----VQTQILGGFLVQISLGQFC--CRQYNGAW--IGDETLRVDNC 302
             ++     ++  +      T +    +++++ G F   CR+    +  I    + VDNC
Sbjct: 242 SERIAKYAFEYAYLNNRKTVTAVHKANIMKLADGLFLESCREIASKYPSIKYNEIIVDNC 301

Query: 303 PVRLINVCWPLMIVRDVTPNLYGNLVANTAAGIAGGTGFMPGGNVGCDHAIFEQGASAGN 362
            ++L++   P      VTPNLYGNLVANTAAGIAGGTG MPGGNVG DHA+FEQGASAGN
Sbjct: 302 CMQLVSK--PEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGN 361

Query: 363 VGNEKIVEGKKANPVALLLSSAMMLRHLQFPSFADRLESAVKRVIMEEKCRTKDLGGDST 422
           VG +KIV+ + ANPVALLLSSAMMLRHLQFPSFADRLE+AVKRVI E K RTKDLGG ST
Sbjct: 362 VGKQKIVDQRTANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGKTRTKDLGGKST 416

Query: 423 TQDVVDAVIAFLD 425
           TQ+VVDAVIA L+
Sbjct: 422 TQEVVDAVIANLE 416

The following BLAST results are available for this feature:

BLAST of Lsi10G008390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IDH1_ARATH	2.4e-117	78.57	Isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial OS=Arabidopsi...	[more]
IDH2_ARATH	2.7e-113	75.28	Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsi...	[more]
IDH3_ARATH	1.1e-111	76.12	Isocitrate dehydrogenase [NAD] regulatory subunit 3, mitochondrial OS=Arabidopsi...	[more]
IDHB_DICDI	3.0e-64	50.79	Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial OS=Dictyostel...	[more]
IDHA_DICDI	5.7e-63	53.30	Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostel...	[more]

BLAST of Lsi10G008390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCU2_CUCSA	2.6e-131	86.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G119390 PE=3 SV=1	[more]
A0A078CED6_BRANA	1.5e-126	61.48	BnaA01g02160D protein OS=Brassica napus GN=BnaA01g02160D PE=3 SV=1	[more]
A0A078BYU6_BRANA	1.6e-125	59.16	BnaC01g03290D protein OS=Brassica napus GN=BnaC01g03290D PE=3 SV=1	[more]
A0A0D3A1T5_BRAOL	4.8e-125	59.67	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1	[more]
A0A103Y7P6_CYNCS	6.3e-125	59.58	Isocitrate and isopropylmalate dehydrogenase family OS=Cynara cardunculus var. s...	[more]

BLAST of Lsi10G008390 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35260.1	1.3e-118	78.57	isocitrate dehydrogenase 1	[more]
AT2G17130.1	1.5e-114	75.28	isocitrate dehydrogenase subunit 2	[more]
AT4G35650.1	6.4e-113	76.12	isocitrate dehydrogenase III	[more]
AT1G32480.1	2.4e-67	60.27	isocitrate dehydrogenase IV	[more]
AT5G03290.1	2.3e-62	50.21	isocitrate dehydrogenase V	[more]

BLAST of Lsi10G008390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094689\|ref\|XP_008448192.1\|	3.3e-135	89.26	PREDICTED: isocitrate dehydrogenase [NAD]	[more]
gi\|778712653\|ref\|XP_004140058.2\|	3.8e-131	86.62	PREDICTED: isocitrate dehydrogenase [NAD]	[more]
gi\|674958094\|emb\|CDX75486.1\|	2.1e-126	61.48	BnaA01g02160D [Brassica napus]	[more]
gi\|674964662\|emb\|CDX69124.1\|	2.4e-125	59.16	BnaC01g03290D [Brassica napus]	[more]
gi\|976918892\|gb\|KVI04047.1\|	9.0e-125	59.58	Isocitrate and isopropylmalate dehydrogenase family [Cynara cardunculus var. sco...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0051287	NAD binding
GO:0000287	magnesium ion binding
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Vocabulary: **INTERPRO**
Term	Definition
IPR024084	IsoPropMal-DH-like_dom
IPR001804	Isocitrate and isopropylmalate dehydrogenases family

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0006102	isocitrate metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004449	isocitrate dehydrogenase (NAD+) activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G008390.1	Lsi10G008390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001804	Isocitrate and isopropylmalate dehydrogenases family	PANTHER	PTHR11835	DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE	coord: 309..424 score: 5.3E-241coord: 18..254 score: 5.3E
IPR024084	Isopropylmalate dehydrogenase-like domain	GENE3D	G3DSA:3.40.718.10		coord: 309..423 score: 2.4E-120coord: 40..254 score: 2.4E
IPR024084	Isopropylmalate dehydrogenase-like domain	PFAM	PF00180	Iso_dh	coord: 308..419 score: 5.4E-21coord: 43..260 score: 9.7
IPR024084	Isopropylmalate dehydrogenase-like domain	SMART	SM01329	Iso_dh_2	coord: 42..419 score: 1.5E
None	No IPR available	PANTHER	PTHR11835:SF51	ISOCITRATE DEHYDROGENASE [NAD] REGULATORY SUBUNIT 2, MITOCHONDRIAL-RELATED	coord: 309..424 score: 5.3E-241coord: 18..254 score: 5.3E
None	No IPR available	unknown	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like	coord: 308..423 score: 3.52E-102coord: 40..253 score: 3.52E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G008390	Csa6G119390	Cucumber (Chinese Long) v2	culsiB409
Lsi10G008390	CSPI06G09750	Wild cucumber (PI 183967)	cpilsiB411
Lsi10G008390	Cucsa.119810	Cucumber (Gy14) v1	cgylsiB177
Lsi10G008390	CmaCh02G002950	Cucurbita maxima (Rimu)	cmalsiB556
Lsi10G008390	CmoCh02G002900	Cucurbita moschata (Rifu)	cmolsiB541
Lsi10G008390	MELO3C013505	Melon (DHL92) v3.5.1	lsimeB051
Lsi10G008390	MELO3C013505.2	Melon (DHL92) v3.6.1	lsimedB053
Lsi10G008390	CsGy6G009880	Cucumber (Gy14) v2	cgyblsiB374
Lsi10G008390	Carg19764	Silver-seed gourd	carlsiB778
Lsi10G008390	CsaV3_6G010190	Cucumber (Chinese Long) v3	cuclsiB432

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G008390	Cucumber (Gy14) v1	cgylsiB174
Lsi10G008390	Cucumber (Gy14) v1	cgylsiB175
Lsi10G008390	Cucurbita maxima (Rimu)	cmalsiB505
Lsi10G008390	Cucurbita moschata (Rifu)	cmolsiB494
Lsi10G008390	Cucurbita pepo (Zucchini)	cpelsiB224
Lsi10G008390	Cucurbita pepo (Zucchini)	cpelsiB592
Lsi10G008390	Wild cucumber (PI 183967)	cpilsiB425
Lsi10G008390	Wild cucumber (PI 183967)	cpilsiB426
Lsi10G008390	Cucumber (Chinese Long) v2	culsiB423
Lsi10G008390	Cucumber (Chinese Long) v2	culsiB424
Lsi10G008390	Melon (DHL92) v3.5.1	lsimeB058
Lsi10G008390	Watermelon (Charleston Gray)	lsiwcgB049
Lsi10G008390	Watermelon (97103) v1	lsiwmB076
Lsi10G008390	Cucumber (Gy14) v2	cgyblsiB387
Lsi10G008390	Melon (DHL92) v3.6.1	lsimedB061
Lsi10G008390	Silver-seed gourd	carlsiB025
Lsi10G008390	Cucumber (Chinese Long) v3	cuclsiB450
Lsi10G008390	Watermelon (97103) v2	lsiwmbB048
Lsi10G008390	Wax gourd	lsiwgoB076