Lsi09G002950.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTATGTATGTTCATGATTTTTGAACAAAAATTAAAGCATTTCGAAAAAAAAAAGGAAAAAAAATGGATAAAAATAAAATGATCTAGAATTTAATTTTATTCTTAAATTTATAAAATTAATTCTATTATTTTTGTCCTAAACAAAGTTCAATTATTTCTTTTATGTCATCGATGAGAGGAGGGTTGTTTGGAAGCTATTTTAAAAACAATTTCAGTTTTCTAATATAAGATTTTAAGAAAATATTGATATTTACCCAGAGTTATTATTTTTTTTTTAGAAATATTTACCCAGAGTTATTTGATATAAAATGAACTTTTATTTTAGACTATTAATTTATTATATGCTACGTACACTTTAAATTTAGATAATTGTAATTTTTACCTTGAACTAAAAAGTAAAAAATACATATCGTAATAAACTTTCATTTGAAGAGTGATTAACAAGATCTTACGTAAGGTTTAATGAGTTATAAATAACGCATGTTTTGATAGAAAAGTATAGAAGTTTAAAGAAAACTGACATTAAACTTTTTTTTTCCACTTTAAATTTGTTAAAATTTTGTGAGTTTTATTGAAATGATTTGATTGTCAATTACATAAATCAACTTAATTGTATACATATTAATTTTTATTAAATTAATTCATGGTTTTGACTTTGAGACAGATTTTTACCGAATTACTTTTTGCTAAATCTAGAGTAATTTTTTTTTTTTTTGACAAACTAAATCTAGAGTGAAATTTCATGTAGAGAAAGTTTTAAAAAAAGTCATCTACGTATTAAATTTTTGTCAACATGTCGATATTATTATCTATACATTTTTAAATTTTTATGGATCCGACCTCAACACTAGATTAAATCCACAATTTGATTATATAGTAAAAAATTTATGAAACAAACCAAAAAAGCAACAAAAGGTGATATAATATAAATAATAAATACTTTAAACTTATTTAAATAGCATAAATATTTATATATTAAATTTAAGGAAAATTATTGTGTATAGAAAAAAAACAAAACTAATTACACATATAGAAAAAAGTACCGTCCATGCTTTTCTATTTCCCACTATTTTTTTCTATACGTGTAATTAGTTTTAGTTTTTTTCTATTTTTGAAAAGACCCCTTAATTTAAATAATTTATCCGATTTATTTATATATCATTTTAAAAAATATCTATCATCATCACACTTTATTTTTATATATATATATATATATATATAACAAAATACTCATAAGTGGAATTAGGAGGTGAACCAAGACATATCAACTAGGTTGACACATCCTTAGCACCCTCATCATATTTCAATCCCTGTCTGAATTCACATTTTATCGATATTTCAATCGACATTTCTATAAATTGAGACTTTGACATTTTAAACTCTTAGTACCAAACAAAAAAAAAAAAAAAAATAGTTTTTCCCCAACATGTTTTTATTGGTACATCCTCTCGATGGTCTTTTTTTTTAAAAAATAAAATAAAATAATATAACAATACTAAGGCTTAGTTTTAGATTGGTGTAGCGTTTAAAATGATTGTTGACAGCTGTCATTTAAAAAAAAAAAAAAATTGTGAAAGGAAATAAAATAGTGTTTGGTAAATTTTAATTTTAAATTAGAAAAAACTAGTTAAGGTGTTTAGTAAATTAATACTAAATTTGTAATAGTTATATAAACTAAAGTAAACTTCAATTAATTTATTATAATATGTTTATTTAAAATCTTACTTGATTTAAATTTCAAATAAAATATTGTTTACTTGAATTATTTGATAAAAATTTAAGAAAAGTAATTGTTATAAAAATTGAATGAATTAAAATTTGAAAATAGATATAACAAAATATATTAAAGTATGAAATGATTATAAAATTTGAGATTGGTAAACGATTAGAGAAGGTAGAAGATTTTCAAGAAAGTTAACTCTAAAAGTTGGTATTTATGAACCTTTACATGTTAGATAAAATTAAAAAGTGATTCGGGTAAATTAATATATAATTTGTTTGATTAAATAGTTAAGATTTTCCTATAATCTCTCATTTTACTGGTAATTTTATTACAAATTTTTAACAATCTTTAAAATAGAAAAACAACATCTTCAAAATAATTTTCAAACTTCTAACTTTTAGTGCATCCAATCCACATTGGCATTGGAATATTTTCTATAGTCATGAATAATATTAAAAGTACTAATATATAAACCAAGTGGTATAAAGATTAAAAAAAAAATGTTATTAATAAGTCCACATCTTTATTTGCGGCCAACATTTTATTACTACAAAGTCGTTTATGAATAATATAATAATATAAAAAATGAATCAAACTATTTACGATATAAAAAAATTTACTGTGTATTACTATAGGAAGTAAATAATTTAATATTTTTTTTGTTTATAATAATTTTTTTAATATTTAATTATGGTTCTTGCACTCTTCGTAGACTAGGGGTTTGAAAAGTCTTAATTTAGAAAATTTCCAATCCTCTAGTGGAAATTTGTCATCCAATCATAACTCCTTTTTAATTTAGTGCAAGTGGAACTAATTTTTTTTTTTTTTTTGCTGAAATTAATATAGCCTCCGTAAAATTCACGCAACTCAAAACCTTGTTAAGTGTTTTCCTTTTCCAAAAAGAAAGAAATAAATAAAATCCTTGTTATGACTTTTCTTTGGTGCATCCATCTTCACGAAATTCCTTCAATTAAAAAGAAAAAAATAAAGAAGAAATAAAAGATTTCTCACACGACAAACTATAGTTTTCGACAACTAAATAAACCCTAAGATACGTGCAATAACTAAAGACTACGACTTCATTTTTCATATATATGAAATTAAAAAAATACTTAAATATATCATATACTGCACATCTATTTTTATGCGCATTTCATCGAGATGTTGGTCTAACCACAATTTATTACATAAATGCTCTTTTTATTTTTTTAAAAAAATATTTAAAATTTTTTTTTTATGTTGTGACGTTAGAGTTTATTTAAACAACTTAATATCATGTCCTACTATATATTAATGAATTAATTAATTAAATTAAAGTTGATCATCAACTGCTTGCTATTTTCCTCAATTTCTCTATTATAAAAGTACCATTTGGATCTCTTCAATTCTCCATAGAGAAACAAAATCTAATACCTTTCTCTTTTTTCTTTCTCTTCTTTCTTTCTCTTCCCAAACCCATGCAGCTACTTTTGAAGTCCGCAACAACTGCCCCTTCACTGTTTGGGCTGCCGCAGTACCCGGCGGCGGTCAACAACTTAATCAGAACGATGTTTGGACATTTGATGTGAATCCCGGCACGGTTGCCGCACGTGTTTGGGCTCGAACTAACTGCAACTTCGACGATTCAGGTCGTGGGGGATGTCAGACTGGCGACTGTGGTGGTATCCTTCAATGCCAAGCTTACGGCAGTCCACCGAACACCCTTGCCGAATACGCATTGAACCAATTCAATAACTTGGACTTCTTCGATATCTCTCTCGTTGATGGGTTTAACGTTCCGATGGAGTTCAGCCCGACTTCTGGCGACTGCACTTGTGGCATCAGGTATATATATGTTAATAAATTATCAAAAGCTTAAGTTGATGAGTTATGGTAAATTTAATGTTTTATTCATATTCTCTGGAAAGTTGCACTGCGGACATCAATGGGCAGTGCCCGAATGAGCTTAGTGCTCCTGGAGGGTGCAACAACTCGTGCACCGTGTTCGGTGGCGATCAATATTGCTGCACCGACCCAAACAGCAGCTGTGGGCCGACGGATTACTCTAAGTTCTTCAAGGATCGGTGCCCAGATGCATACAGTTACCCAAAAGACGATGCAACTAGCACATTCACTTGCCCCGGAGGAACCAACTACAGGGTCGTCTTCTGCCCTTAG ATGACTATTACCATTTGGATCTCTTCAATTCTCCATAGAGAAACAAAATCTAATACCTTTCTCTTTTTTCTTTCTCTTCTTTCTTTCTCTTCCCAAACCCATGCAGCTACTTTTGAAGTCCGCAACAACTGCCCCTTCACTGTTTGGGCTGCCGCAGTACCCGGCGGCGGTCAACAACTTAATCAGAACGATGTTTGGACATTTGATGTGAATCCCGGCACGGTTGCCGCACGTGTTTGGGCTCGAACTAACTGCAACTTCGACGATTCAGGTCGTGGGGGATGTCAGACTGGCGACTGTGGTGGTATCCTTCAATGCCAAGCTTACGGCAGTCCACCGAACACCCTTGCCGAATACGCATTGAACCAATTCAATAACTTGGACTTCTTCGATATCTCTCTCGTTGATGGGTTTAACGTTCCGATGGACAGCTGTGGGCCGACGGATTACTCTAAGTTCTTCAAGGATCGGTGCCCAGATGCATACAGTTACCCAAAAGACGATGCAACTAGCACATTCACTTGCCCCGGAGGAACCAACTACAGGGTCGTCTTCTGCCCTTAG ATGACTATTACCATTTGGATCTCTTCAATTCTCCATAGAGAAACAAAATCTAATACCTTTCTCTTTTTTCTTTCTCTTCTTTCTTTCTCTTCCCAAACCCATGCAGCTACTTTTGAAGTCCGCAACAACTGCCCCTTCACTGTTTGGGCTGCCGCAGTACCCGGCGGCGGTCAACAACTTAATCAGAACGATGTTTGGACATTTGATGTGAATCCCGGCACGGTTGCCGCACGTGTTTGGGCTCGAACTAACTGCAACTTCGACGATTCAGGTCGTGGGGGATGTCAGACTGGCGACTGTGGTGGTATCCTTCAATGCCAAGCTTACGGCAGTCCACCGAACACCCTTGCCGAATACGCATTGAACCAATTCAATAACTTGGACTTCTTCGATATCTCTCTCGTTGATGGGTTTAACGTTCCGATGGACAGCTGTGGGCCGACGGATTACTCTAAGTTCTTCAAGGATCGGTGCCCAGATGCATACAGTTACCCAAAAGACGATGCAACTAGCACATTCACTTGCCCCGGAGGAACCAACTACAGGGTCGTCTTCTGCCCTTAG MTITIWISSILHRETKSNTFLFFLSLLSFSSQTHAATFEVRNNCPFTVWAAAVPGGGQQLNQNDVWTFDVNPGTVAARVWARTNCNFDDSGRGGCQTGDCGGILQCQAYGSPPNTLAEYALNQFNNLDFFDISLVDGFNVPMDSCGPTDYSKFFKDRCPDAYSYPKDDATSTFTCPGGTNYRVVFCP
BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2) HSP 1 Score: 221.5 bits (563), Expect = 7.9e-57 Identity = 115/216 (53.24%), Postives = 131/216 (60.65%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.5e-55 Identity = 113/219 (51.60%), Postives = 133/219 (60.73%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55 Identity = 113/202 (55.94%), Postives = 122/202 (60.40%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55 Identity = 114/224 (50.89%), Postives = 138/224 (61.61%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. Swiss-Prot
Match: ALL13_OLEEU (Thaumatin-like protein OS=Olea europaea PE=1 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54 Identity = 107/223 (47.98%), Postives = 131/223 (58.74%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TrEMBL
Match: A0A0A0KKB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G155460 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 2.5e-73 Identity = 143/218 (65.60%), Postives = 150/218 (68.81%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TrEMBL
Match: A0A0A0KMN1_CUCSA (Thaumatin-like protein OS=Cucumis sativus GN=Csa_5G155450 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 4.3e-70 Identity = 135/220 (61.36%), Postives = 150/220 (68.18%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TrEMBL
Match: M0TI38_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 4.0e-68 Identity = 120/169 (71.01%), Postives = 137/169 (81.07%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TrEMBL
Match: A0A059C162_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00557 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 5.3e-68 Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TrEMBL
Match: M0TBU2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 5.5e-65 Identity = 121/175 (69.14%), Postives = 132/175 (75.43%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT4G11650.1 (AT4G11650.1 osmotin 34) HSP 1 Score: 207.6 bits (527), Expect = 6.6e-54 Identity = 112/220 (50.91%), Postives = 128/220 (58.18%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT1G75040.1 (AT1G75040.1 pathogenesis-related gene 5) HSP 1 Score: 129.4 bits (324), Expect = 2.3e-30 Identity = 84/240 (35.00%), Postives = 101/240 (42.08%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT1G75050.1 (AT1G75050.1 Pathogenesis-related thaumatin superfamily protein) HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29 Identity = 80/238 (33.61%), Postives = 100/238 (42.02%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT1G75030.1 (AT1G75030.1 thaumatin-like protein 3) HSP 1 Score: 120.9 bits (302), Expect = 8.2e-28 Identity = 79/239 (33.05%), Postives = 102/239 (42.68%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. TAIR10
Match: AT1G73620.1 (AT1G73620.1 Pathogenesis-related thaumatin superfamily protein) HSP 1 Score: 111.7 bits (278), Expect = 4.9e-25 Identity = 81/242 (33.47%), Postives = 100/242 (41.32%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|659073737|ref|XP_008437224.1| (PREDICTED: protein P21-like [Cucumis melo]) HSP 1 Score: 286.2 bits (731), Expect = 4.2e-74 Identity = 143/219 (65.30%), Postives = 153/219 (69.86%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|659073739|ref|XP_008437225.1| (PREDICTED: protein P21-like [Cucumis melo]) HSP 1 Score: 286.2 bits (731), Expect = 4.2e-74 Identity = 144/218 (66.06%), Postives = 151/218 (69.27%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|778708255|ref|XP_004143988.2| (PREDICTED: protein P21-like [Cucumis sativus]) HSP 1 Score: 283.1 bits (723), Expect = 3.5e-73 Identity = 143/218 (65.60%), Postives = 150/218 (68.81%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|449452358|ref|XP_004143926.1| (PREDICTED: protein P21-like [Cucumis sativus]) HSP 1 Score: 272.3 bits (695), Expect = 6.2e-70 Identity = 135/220 (61.36%), Postives = 150/220 (68.18%), Query Frame = 1
BLAST of Lsi09G002950.1 vs. NCBI nr
Match: gi|629106971|gb|KCW72117.1| (hypothetical protein EUGRSUZ_E00557 [Eucalyptus grandis]) HSP 1 Score: 265.4 bits (677), Expect = 7.6e-68 Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
|