Lsi05G014070.1 (mRNA) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G014070.1
TypemRNA
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMyb-like DNA-binding domain containing protein, expressed
Locationchr05 : 21990911 .. 21992521 (+)
Sequence length1431
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCTCTCATTTTAACACCCTCAACTTTCCCTATCTATAAAACCAACCCCCCTTCTTTTCTCTCCTCCACGTAGCCTTCTTTTCCCCTTTCTCTCTCTAAAATCCTCCGTCGAAAATCAAATCAAACCTGCCATTAATAGCCGGAAAATGGACGGAAATAAAGAGAAAAGGTTCGATTCCGATACCTTACACGGCGGTGATGACGACGGCAACCTGAGGAGAGGACCGTGGACGGTGGAAGAGGACATAACTCTCATCAATTACATCGCTAATCACGGCGACGGCCGCTGGAATTCCCTCGCTCGTTGCGCCGGTAACCGATTCCTCTGTTTCTGATTTTTATCATTCGCGCATTTCGTCTATTGAAATCTGTGATTGATTGATTTTGAGAATCGGAAATTTGATTTACAGGTCTCAAGCGTACCGGAAAAAGCTGCCGGTTGCGGTGGCTGAACTATCTCCGACCTGACGTCCGGCGAGGAAATATTACGCTTGAAGAACAACTCTTGATTCTCGAACTTCATTCCCGTTGGGGAAATCGGTACGTCGATTTTTTTTTTTGCTTTCAATCGCAAAATGTGTGTGTATATATATATAAATATAATTTTAAATTTTTTTTTCAGATGGTCGAAAATTGCGCAACAATTACCGGGAAGAACGGATAATGAAATAAAGAATTATTGGAGAACTCGAGTTCAGAAGCACGCAAAACAGCTGAAATGTGACGTTAACAGTAAACAATTCAAAGATACCATGCGATATCTCTGGATGCCGCGTCTGGTCGAACGGATTCAGGCGGCCGCCGTGTCCTCCGCCGCCGTAGACGGCAGCAGTTCGTACGGATCGGCAACTCCGACGCCGCCGGCAGTGATGATGAACGGTGGGAGCGATTTTGTCAGTACTCCACAGGTCACTCCGGGTTACACGTCGGAGAATTCTAGCTCCGGCGGCGGCGGCGGTTCCTCTGACGGGACACAGGTTTCCTCCGTGTCGGAGTTGACGGATTGCTACAATAATTTCAGTTGTTTTCCGGTCGGTTACGGCCATGAGACGGCGGCGGCACCGCCGTTGCAGAGTCCGGCGCCTGGATTCTTCAACGAGGGGACATTGGATTTTCAGGCGATGGAACAGAGTACTTGCCAGTGGCTGGCGGAGGACGGTGGTGTTGACACGTCGGAGAGTTTGTGGAATGCTGCCGGTGCCGGAGCTGATTACTTCTGGTTCTTGCAGCAACAATTGAATTAACAAAGGAAAAAAAAAAAGCAGAAGAAGATTAATAAAAAGGAGAAAATATACATAATTTGTAGAGCTGAAGATCATGATCTGAAAAAAAAAAAAATTAGAAGAATTATAGGATTTTACCAAGAACGGGGTCCAATTTTTTGGATTGTTCTTTTTTTTTTTTTTCTTTTCTTTTAAAAAAAGTGTTTCTTTAAATTTCCAATTATTGGGGGTTGGGGGGAATTTGTATAATTGAATCTTGAGGGGTTTTTTATTTTCTTTTTTTGTTCTTTCTATATCATCAATGGAGTGGTAGGCTGCTAGCTAGCTAGCTACTTCTTCATTCCCTCTTTCCTTATCTCTAAATAATTAATTTATGCTTCCATGAT

mRNA sequence

TTTTCTCTCATTTTAACACCCTCAACTTTCCCTATCTATAAAACCAACCCCCCTTCTTTTCTCTCCTCCACGTAGCCTTCTTTTCCCCTTTCTCTCTCTAAAATCCTCCGTCGAAAATCAAATCAAACCTGCCATTAATAGCCGGAAAATGGACGGAAATAAAGAGAAAAGGTTCGATTCCGATACCTTACACGGCGGTGATGACGACGGCAACCTGAGGAGAGGACCGTGGACGGTGGAAGAGGACATAACTCTCATCAATTACATCGCTAATCACGGCGACGGCCGCTGGAATTCCCTCGCTCGTTGCGCCGGTCTCAAGCGTACCGGAAAAAGCTGCCGGTTGCGGTGGCTGAACTATCTCCGACCTGACGTCCGGCGAGGAAATATTACGCTTGAAGAACAACTCTTGATTCTCGAACTTCATTCCCGTTGGGGAAATCGATGGTCGAAAATTGCGCAACAATTACCGGGAAGAACGGATAATGAAATAAAGAATTATTGGAGAACTCGAGTTCAGAAGCACGCAAAACAGCTGAAATGTGACGTTAACAGTAAACAATTCAAAGATACCATGCGATATCTCTGGATGCCGCGTCTGGTCGAACGGATTCAGGCGGCCGCCGTGTCCTCCGCCGCCGTAGACGGCAGCAGTTCGTACGGATCGGCAACTCCGACGCCGCCGGCAGTGATGATGAACGGTGGGAGCGATTTTGTCAGTACTCCACAGGTCACTCCGGGTTACACGTCGGAGAATTCTAGCTCCGGCGGCGGCGGCGGTTCCTCTGACGGGACACAGGTTTCCTCCGTGTCGGAGTTGACGGATTGCTACAATAATTTCAGTTGTTTTCCGGTCGGTTACGGCCATGAGACGGCGGCGGCACCGCCGTTGCAGAGTCCGGCGCCTGGATTCTTCAACGAGGGGACATTGGATTTTCAGGCGATGGAACAGAGTACTTGCCAGTGGCTGGCGGAGGACGGTGGTGTTGACACGTCGGAGAGTTTGTGGAATGCTGCCGGTGCCGGAGCTGATTACTTCTGGTTCTTGCAGCAACAATTGAATTAACAAAGGAAAAAAAAAAAGCAGAAGAAGATTAATAAAAAGGAGAAAATATACATAATTTGTAGAGCTGAAGATCATGATCTGAAAAAAAAAAAAATTAGAAGAATTATAGGATTTTACCAAGAACGGGGTCCAATTTTTTGGATTGTTCTTTTTTTTTTTTTTCTTTTCTTTTAAAAAAAGTGTTTCTTTAAATTTCCAATTATTGGGGGTTGGGGGGAATTTGTATAATTGAATCTTGAGGGGTTTTTTATTTTCTTTTTTTGTTCTTTCTATATCATCAATGGAGTGGTAGGCTGCTAGCTAGCTAGCTACTTCTTCATTCCCTCTTTCCTTATCTCTAAATAATTAATTTATGCTTCCATGAT

Coding sequence (CDS)

ATGGACGGAAATAAAGAGAAAAGGTTCGATTCCGATACCTTACACGGCGGTGATGACGACGGCAACCTGAGGAGAGGACCGTGGACGGTGGAAGAGGACATAACTCTCATCAATTACATCGCTAATCACGGCGACGGCCGCTGGAATTCCCTCGCTCGTTGCGCCGGTCTCAAGCGTACCGGAAAAAGCTGCCGGTTGCGGTGGCTGAACTATCTCCGACCTGACGTCCGGCGAGGAAATATTACGCTTGAAGAACAACTCTTGATTCTCGAACTTCATTCCCGTTGGGGAAATCGATGGTCGAAAATTGCGCAACAATTACCGGGAAGAACGGATAATGAAATAAAGAATTATTGGAGAACTCGAGTTCAGAAGCACGCAAAACAGCTGAAATGTGACGTTAACAGTAAACAATTCAAAGATACCATGCGATATCTCTGGATGCCGCGTCTGGTCGAACGGATTCAGGCGGCCGCCGTGTCCTCCGCCGCCGTAGACGGCAGCAGTTCGTACGGATCGGCAACTCCGACGCCGCCGGCAGTGATGATGAACGGTGGGAGCGATTTTGTCAGTACTCCACAGGTCACTCCGGGTTACACGTCGGAGAATTCTAGCTCCGGCGGCGGCGGCGGTTCCTCTGACGGGACACAGGTTTCCTCCGTGTCGGAGTTGACGGATTGCTACAATAATTTCAGTTGTTTTCCGGTCGGTTACGGCCATGAGACGGCGGCGGCACCGCCGTTGCAGAGTCCGGCGCCTGGATTCTTCAACGAGGGGACATTGGATTTTCAGGCGATGGAACAGAGTACTTGCCAGTGGCTGGCGGAGGACGGTGGTGTTGACACGTCGGAGAGTTTGTGGAATGCTGCCGGTGCCGGAGCTGATTACTTCTGGTTCTTGCAGCAACAATTGAATTAA

Protein sequence

MDGNKEKRFDSDTLHGGDDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPAVMMNGGSDFVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSCFPVGYGHETAAAPPLQSPAPGFFNEGTLDFQAMEQSTCQWLAEDGGVDTSESLWNAAGAGADYFWFLQQQLN
Homology
[Close]
BLAST of Lsi05G014070.1 vs. Swiss-Prot
Match: MY108_ARATH (Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.8e-77
Identity = 172/309 (55.66%), Postives = 201/309 (65.05%), Query Frame = 1 

Query: 18  DDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +D+ +L+RGPWT EED  L+NYIA +G+GRWNSL+RCAGL+RTGKSCRLRWLNYLRPDVR
Sbjct: 14  EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVR 73

Query: 78  RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
           RGNITLEEQLLILELHSRWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQLKCDVNS+
Sbjct: 74  RGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 133

Query: 138 QFKDTMRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPAVMMNGGSDFVSTP-QVT 197
           QFKDTM+YLWMPRLVERIQ+A+ SSAA        + T T       G S  ++T     
Sbjct: 134 QFKDTMKYLWMPRLVERIQSASASSAA-------AATTTTTTTTGSAGTSSCITTSNNQF 193

Query: 198 PGYTSENSSSGGGGG----------SSDGTQVSSVSELTDCYNNFSCFPVGY-GHETAAA 257
             Y   N++ G   G           +    VS  S+LT+ Y+  +  P  Y G    + 
Sbjct: 194 MNYDYNNNNMGQQFGVMSNNDYITPENSSVAVSPASDLTEYYSAPNPNPEYYSGQMGNSY 253

Query: 258 PPLQS-------PAPGFFNEGTL--DFQAM-EQSTCQWLAE-DGGVDTSESLWNAAGAGA 304
            P Q+       P   F   G L  D  AM EQS   W    +G   +S+SLWN  G   
Sbjct: 254 YPDQNLVSSQLLPDNYFDYSGLLDEDLTAMQEQSNLSWFENINGAASSSDSLWN-IGETD 313

[Close]
BLAST of Lsi05G014070.1 vs. Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.6e-51
Identity = 91/110 (82.73%), Postives = 102/110 (92.73%), Query Frame = 1 

Query: 20  DGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRG 79
           D  +R+GPWT+EED+ LINYIANHG+G WNSLAR AGLKRTGKSCRLRWLNYLRPDVRRG
Sbjct: 10  DVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRG 69

Query: 80  NITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQ 130
           NIT EEQLLI+ELH++WGNRWSKIA+ LPGRTDNEIKNYWRTR+QKH +Q
Sbjct: 70  NITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQKHMEQ 119

[Close]
BLAST of Lsi05G014070.1 vs. Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.2e-51
Identity = 89/114 (78.07%), Postives = 103/114 (90.35%), Query Frame = 1 

Query: 16  GGDDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPD 75
           G   +  +R+GPWT+EED+ LINYIANHGDG WNSLA+ AGLKRTGKSCRLRWLNYLRPD
Sbjct: 13  GSSAEAEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPD 72

Query: 76  VRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQ 130
           VRRGNIT EEQL+I+ELH++WGNRWSKIA+ LPGRTDNEIKN+WRTR+QK+ KQ
Sbjct: 73  VRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYIKQ 126

[Close]
BLAST of Lsi05G014070.1 vs. Swiss-Prot
Match: MYB24_ARATH (Transcription factor MYB24 OS=Arabidopsis thaliana GN=MYB24 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.6e-49
Identity = 86/110 (78.18%), Postives = 100/110 (90.91%), Query Frame = 1 

Query: 17  GDDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDV 76
           G  D  +R+GPWT+EED+ LINYIANHG+G WNSLA+ AGLKRTGKSCRLRWLNYLRPDV
Sbjct: 11  GSGDAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDV 70

Query: 77  RRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKH 127
           RRGNIT EEQL I+ELH++WGNRWSKIA+ LPGRTDNEIKN+WRT++QK+
Sbjct: 71  RRGNITPEEQLTIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTKIQKY 120

[Close]
BLAST of Lsi05G014070.1 vs. Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.6e-49
Identity = 88/111 (79.28%), Postives = 102/111 (91.89%), Query Frame = 1 

Query: 20  DGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRG 79
           D  +R+GPWT+EED+ LIN+I+NHG+G WN++AR AGLKRTGKSCRLRWLNYLRPDVRRG
Sbjct: 10  DVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRG 69

Query: 80  NITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYW-RTRVQKHAKQ 130
           NIT EEQLLI+ELH++WGNRWSKIA+ LPGRTDNEIKNYW RTR+QKH KQ
Sbjct: 70  NITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHIKQ 120

[Close]
BLAST of Lsi05G014070.1 vs. TrEMBL
Match: A0A0A0L5Y4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168940 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 4.5e-157
Identity = 271/305 (88.85%), Postives = 284/305 (93.11%), Query Frame = 1 

Query: 1   MDGNKEKRFDSDTLHGGDDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK++ FDS TLHGG+DD +LRRGPWTVEEDI LINYI NHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKDRMFDSGTLHGGEDDADLRRGPWTVEEDIILINYIHNHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAA+V+S AVDGS SYGS TPT PA
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAASVASTAVDGSRSYGSVTPTQPA 180

Query: 181 VMMNGGSDFVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSCFPVGYGH 240
           +MMNGGSDFVSTPQVTP YTSENSSSGGGGGSSDGTQVSS+SELTDCYNNFSCFP GYG 
Sbjct: 181 LMMNGGSDFVSTPQVTPSYTSENSSSGGGGGSSDGTQVSSMSELTDCYNNFSCFPSGYGQ 240

Query: 241 ETAAAPPLQSPAPGFFNEGTLDFQAMEQSTCQWLAEDGGVDTSESLWNAAGAGADYFWFL 300
           + AAA  LQSPA GFFNEGTLDFQAMEQS+C+W+A DGGV TSESLW+ AG GADY WFL
Sbjct: 241 DAAAAAALQSPAGGFFNEGTLDFQAMEQSSCEWMAGDGGVVTSESLWSGAGDGADYLWFL 300

Query: 301 QQQLN 306
           QQQLN
Sbjct: 301 QQQLN 305

[Close]
BLAST of Lsi05G014070.1 vs. TrEMBL
Match: B9HIK1_POPTR (GmMYB12 family protein OS=Populus trichocarpa GN=POPTR_0008s10080g PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.9e-91
Identity = 197/315 (62.54%), Postives = 215/315 (68.25%), Query Frame = 1 

Query: 21  GNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGN 80
           G+LRRGPWTVEED  LINYIA HG+GRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGN
Sbjct: 25  GDLRRGPWTVEEDFKLINYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGN 84

Query: 81  ITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFK 140
           ITLEEQL+ILELHSRWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFK
Sbjct: 85  ITLEEQLMILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFK 144

Query: 141 DTMRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPAVMMN---------------- 200
           DTMRYLWMPRLVERIQAAA   A    +SS  +AT + PA   +                
Sbjct: 145 DTMRYLWMPRLVERIQAAA---ATATNTSSTSTATVSAPATNQHSISNRDVGTGNLVMAP 204

Query: 201 ---GGSDFVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSELTDCYNN----------- 260
               G+DF     VT  YT ENSS+      S  TQVS VS+LT  Y N           
Sbjct: 205 HGINGNDF-GVSHVTQSYTPENSST-AASSDSFATQVSPVSDLTTDYYNIPVNRNTNPDY 264

Query: 261 FSCFPVGYGHETAAAPPLQSPAPGFFNEGTLDFQAMEQSTCQWLAEDGGVDTSESLWNAA 306
           F    VGY  E+  +P      PGFFN G LDFQAME S+ QW  + G  DTS+++WN  
Sbjct: 265 FQAGQVGYS-ESMISP------PGFFNHG-LDFQAMEHSSNQWPMDSG--DTSDNMWN-- 319

[Close]
BLAST of Lsi05G014070.1 vs. TrEMBL
Match: A0A061EQ77_THECC (Myb domain protein 112 isoform 1 OS=Theobroma cacao GN=TCM_021433 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.8e-90
Identity = 196/308 (63.64%), Postives = 224/308 (72.73%), Query Frame = 1 

Query: 18  DDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +++ +LRRGPWTVEED  LINYIA HG+GRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR
Sbjct: 15  EEEMDLRRGPWTVEEDFKLINYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 74

Query: 78  RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
           RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK
Sbjct: 75  RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 134

Query: 138 QFKDTMRYLWMPRLVERIQAAAVSSAAVDGSS---SYGSATPTPP------AVMMNG--G 197
           QFKDTMRYLWMPRL ERIQAAA ++ A   +S   +  SAT T P       V+ +G  G
Sbjct: 135 QFKDTMRYLWMPRLAERIQAAAAAATATSSTSVTTTSASATTTAPNVGTGQMVLPHGVLG 194

Query: 198 SDFVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSEL-TDCYNNFSCF----PVGYGHE 257
           +DF    QVTP YT ENSS+      S GTQVS VS+L TD Y+N        P  Y   
Sbjct: 195 NDF-GRAQVTPSYTPENSST-AASSDSFGTQVSPVSDLTTDYYSNIPVSNNPNPDNYFQA 254

Query: 258 TAA--APPLQSPAPGFFNEGTLDFQAMEQSTCQ--WLAEDGGVDTSESLWNAAGAGADYF 306
           + A  +  L SP+  ++N G +DFQ+MEQ+     WL  DGG D S++ +N      + F
Sbjct: 255 SQAGYSDSLISPSGNYYNHG-MDFQSMEQNNTNNPWL--DGGDDASDNFFN-----PEDF 312

[Close]
BLAST of Lsi05G014070.1 vs. TrEMBL
Match: A5B5N9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029107 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.2e-87
Identity = 191/303 (63.04%), Postives = 214/303 (70.63%), Query Frame = 1 

Query: 18  DDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +++ +LRRGPWTVEED+TL+NYIA  G+GRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR
Sbjct: 15  EEEMDLRRGPWTVEEDLTLVNYIATQGEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 74

Query: 78  RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
           RGNITLEEQLLILELHSRWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK
Sbjct: 75  RGNITLEEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 134

Query: 138 QFKDTMRYLWMPRLVERIQAAAV-----SSAAVDGSSSYGS----ATPTPPAVMMNGGSD 197
           QFKDTMRYLWMPRLVERIQAAA      S AAV      GS    A       M  GG+D
Sbjct: 135 QFKDTMRYLWMPRLVERIQAAAAATSGSSPAAVAAHQFXGSCDIVAGSAAVPQMAAGGAD 194

Query: 198 FVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSCFPVGYGH-------- 257
           F    QV+ GYT ENSS+      S G QVS VS+LT+ YN    FPV            
Sbjct: 195 FYGG-QVSTGYTPENSST-AASSDSFGAQVSPVSDLTEIYN----FPVSDNQNPDFFQTG 254

Query: 258 ETAAAPPLQSPAPGFFNEGTLDFQAMEQSTCQWLAEDGGVDTSESLWNAAGAGADYFWFL 304
           +      L SP+ G+FN+G LDFQ+ME +T QW  E G   T+++LWN      +  W +
Sbjct: 255 QVGYTDSLISPS-GYFNQG-LDFQSMEPNT-QWY-EGGDTATADNLWN-----VEDIWSV 302

[Close]
BLAST of Lsi05G014070.1 vs. TrEMBL
Match: C3W4Q3_VITVI (R2R3 transcription factor MYB108-like protein 1 OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.9e-87
Identity = 191/303 (63.04%), Postives = 214/303 (70.63%), Query Frame = 1 

Query: 18  DDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +++ +LRRGPWTVEED+TL+NYIA  G+GRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR
Sbjct: 15  EEEMDLRRGPWTVEEDLTLVNYIATQGEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 74

Query: 78  RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
           RGNITLEEQLLILELHSRWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK
Sbjct: 75  RGNITLEEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 134

Query: 138 QFKDTMRYLWMPRLVERIQAAAV-----SSAAVDGSSSYGS----ATPTPPAVMMNGGSD 197
           QFKDTMRYLWMPRLVERIQAAA      S AAV      GS    A       M  GG+D
Sbjct: 135 QFKDTMRYLWMPRLVERIQAAAAATSGSSPAAVAAHQFSGSCDIVAGSAAVPQMAAGGAD 194

Query: 198 FVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSCFPVGYGH-------- 257
           F    QV+ GYT ENSS+      S G QVS VS+LT+ YN    FPV            
Sbjct: 195 FYGG-QVSTGYTPENSST-AASSDSFGAQVSPVSDLTEIYN----FPVSDNQNPDFFQTD 254

Query: 258 ETAAAPPLQSPAPGFFNEGTLDFQAMEQSTCQWLAEDGGVDTSESLWNAAGAGADYFWFL 304
           +      L SP+ G+FN+G LDFQ+ME +T QW  E G   T+++LWN      +  W +
Sbjct: 255 QVGYTDSLISPS-GYFNQG-LDFQSMEPNT-QWY-EGGDTATADNLWN-----VEDIWSV 302

[Close]
BLAST of Lsi05G014070.1 vs. TAIR10
Match: AT3G06490.1 (AT3G06490.1 myb domain protein 108)

HSP 1 Score: 289.7 bits (740), Expect = 2.2e-78
Identity = 172/309 (55.66%), Postives = 201/309 (65.05%), Query Frame = 1 

Query: 18  DDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +D+ +L+RGPWT EED  L+NYIA +G+GRWNSL+RCAGL+RTGKSCRLRWLNYLRPDVR
Sbjct: 14  EDEMDLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVR 73

Query: 78  RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
           RGNITLEEQLLILELHSRWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQLKCDVNS+
Sbjct: 74  RGNITLEEQLLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQ 133

Query: 138 QFKDTMRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPAVMMNGGSDFVSTP-QVT 197
           QFKDTM+YLWMPRLVERIQ+A+ SSAA        + T T       G S  ++T     
Sbjct: 134 QFKDTMKYLWMPRLVERIQSASASSAA-------AATTTTTTTTGSAGTSSCITTSNNQF 193

Query: 198 PGYTSENSSSGGGGG----------SSDGTQVSSVSELTDCYNNFSCFPVGY-GHETAAA 257
             Y   N++ G   G           +    VS  S+LT+ Y+  +  P  Y G    + 
Sbjct: 194 MNYDYNNNNMGQQFGVMSNNDYITPENSSVAVSPASDLTEYYSAPNPNPEYYSGQMGNSY 253

Query: 258 PPLQS-------PAPGFFNEGTL--DFQAM-EQSTCQWLAE-DGGVDTSESLWNAAGAGA 304
            P Q+       P   F   G L  D  AM EQS   W    +G   +S+SLWN  G   
Sbjct: 254 YPDQNLVSSQLLPDNYFDYSGLLDEDLTAMQEQSNLSWFENINGAASSSDSLWN-IGETD 313

[Close]
BLAST of Lsi05G014070.1 vs. TAIR10
Match: AT5G49620.2 (AT5G49620.2 myb domain protein 78)

HSP 1 Score: 286.6 bits (732), Expect = 1.8e-77
Identity = 167/307 (54.40%), Postives = 200/307 (65.15%), Query Frame = 1 

Query: 18  DDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +++ ++RRGPWTVEED+ LINYIA+HG+GRWNSLARCA LKRTGKSCRLRWLNYLRPDVR
Sbjct: 21  EEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPDVR 80

Query: 78  RGNITLEEQLLILELHSRWGN--------------RWSKIAQQLPGRTDNEIKNYWRTRV 137
           RGNITLEEQLLILELH+RWGN              RWSKIAQ LPGRTDNEIKNYWRTRV
Sbjct: 81  RGNITLEEQLLILELHTRWGNSNEFDHKFSSSCEDRWSKIAQYLPGRTDNEIKNYWRTRV 140

Query: 138 QKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPAVMM 197
           QKHAKQLKCDVNS+QFKDTM+YLWMPRLVERIQAA++ S     S S    T +   V+ 
Sbjct: 141 QKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIGSV----SMSSCVTTSSDQFVIN 200

Query: 198 NGGSDFVSTPQVTP---GYTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSCFPVGYGH 257
           N  ++ V    +     GY + ++SS           VS VS+LT+C  +   + +G   
Sbjct: 201 NNNTNNVDNLALMSNPNGYITPDNSS---------VAVSPVSDLTECQVSSEVWKIGQ-D 260

Query: 258 ETAAAPPLQSPAPGFFNEGTL--DFQAM-EQSTCQWLAEDGGV--DTSESLWNAAGAGAD 303
           E    P + SP     + G L  DF  M +QS   W     G+  + S+S WN      +
Sbjct: 261 ENLVDPKMTSPNYMDNSSGLLNGDFTKMQDQSDLNWFENINGMVPNYSDSFWNI--GNDE 311

[Close]
BLAST of Lsi05G014070.1 vs. TAIR10
Match: AT1G48000.1 (AT1G48000.1 myb domain protein 112)

HSP 1 Score: 245.0 bits (624), Expect = 6.1e-65
Identity = 122/189 (64.55%), Postives = 146/189 (77.25%), Query Frame = 1 

Query: 23  LRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGNIT 82
           +RRGPWTVEED+ L++YI+ HG+GRWNSL+R AGL RTGKSCRLRWLNYLRPD+RRG+I+
Sbjct: 32  IRRGPWTVEEDMKLVSYISLHGEGRWNSLSRSAGLNRTGKSCRLRWLNYLRPDIRRGDIS 91

Query: 83  LEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDT 142
           L+EQ +ILELHSRWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAK LKCDVNSKQFKDT
Sbjct: 92  LQEQFIILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKLLKCDVNSKQFKDT 151

Query: 143 MRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPAVMMNG---GSDFVSTPQVTPGY 202
           +++LWMPRL+ERI A        +  S   S+  T  +   +     S F    QV  G 
Sbjct: 152 IKHLWMPRLIERIAATQSVQFTSNHYSPENSSVATATSSTSSSEAVRSSFYGGDQVEFG- 211

Query: 203 TSENSSSGG 209
           T ++ ++GG
Sbjct: 212 TLDHMTNGG 219

[Close]
BLAST of Lsi05G014070.1 vs. TAIR10
Match: AT2G47190.1 (AT2G47190.1 myb domain protein 2)

HSP 1 Score: 239.6 bits (610), Expect = 2.6e-63
Identity = 120/197 (60.91%), Postives = 142/197 (72.08%), Query Frame = 1 

Query: 18  DDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           ++D ++R+GPWT EED  L+N+++ HGD RWN +AR +GLKRTGKSCRLRWLNYLRPDVR
Sbjct: 15  EEDSDVRKGPWTEEEDAILVNFVSIHGDARWNHIARSSGLKRTGKSCRLRWLNYLRPDVR 74

Query: 78  RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
           RGNITLEEQ +IL+LHS WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK AK L+CDVNS 
Sbjct: 75  RGNITLEEQFMILKLHSLWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKHLRCDVNSN 134

Query: 138 QFKDTMRYLWMPRLVERIQAAA-------VSSAAVDGSSSYGSATPTPPAVM---MNGGS 197
            FK+TMR +WMPRLVERI A +       V S   D S      +P  P  +    N   
Sbjct: 135 LFKETMRNVWMPRLVERINAQSLPTTCEQVESMITDPSQPVNEPSPVEPGFVQFSQNHHQ 194

Query: 198 DFVSTPQVTPGYTSENS 205
            FV   +++   TS NS
Sbjct: 195 QFVPATELSA--TSSNS 209

[Close]
BLAST of Lsi05G014070.1 vs. TAIR10
Match: AT1G68320.1 (AT1G68320.1 myb domain protein 62)

HSP 1 Score: 226.5 bits (576), Expect = 2.2e-59
Identity = 99/138 (71.74%), Postives = 120/138 (86.96%), Query Frame = 1 

Query: 19  DDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRR 78
           +D  LRRGPWT+EED  L NYI ++G+GRWN +A+CAGLKRTGKSCRLRWLNYL+PD+RR
Sbjct: 15  EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGKSCRLRWLNYLKPDIRR 74

Query: 79  GNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQ 138
           GN+T +EQLLILELHS+WGNRWSKIAQ LPGRTDNEIKNYWRTRVQK A+QL  + NS +
Sbjct: 75  GNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESNSDK 134

Query: 139 FKDTMRYLWMPRLVERIQ 157
           F D +R  W+PRL+E+++
Sbjct: 135 FFDAVRSFWVPRLIEKME 152

[Close]
BLAST of Lsi05G014070.1 vs. NCBI nr
Match: gi|778679114|ref|XP_011651090.1| (PREDICTED: transcription factor MYB108 [Cucumis sativus])

HSP 1 Score: 562.0 bits (1447), Expect = 6.4e-157
Identity = 271/305 (88.85%), Postives = 284/305 (93.11%), Query Frame = 1 

Query: 1   MDGNKEKRFDSDTLHGGDDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK++ FDS TLHGG+DD +LRRGPWTVEEDI LINYI NHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKDRMFDSGTLHGGEDDADLRRGPWTVEEDIILINYIHNHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPA 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAA+V+S AVDGS SYGS TPT PA
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAASVASTAVDGSRSYGSVTPTQPA 180

Query: 181 VMMNGGSDFVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSCFPVGYGH 240
           +MMNGGSDFVSTPQVTP YTSENSSSGGGGGSSDGTQVSS+SELTDCYNNFSCFP GYG 
Sbjct: 181 LMMNGGSDFVSTPQVTPSYTSENSSSGGGGGSSDGTQVSSMSELTDCYNNFSCFPSGYGQ 240

Query: 241 ETAAAPPLQSPAPGFFNEGTLDFQAMEQSTCQWLAEDGGVDTSESLWNAAGAGADYFWFL 300
           + AAA  LQSPA GFFNEGTLDFQAMEQS+C+W+A DGGV TSESLW+ AG GADY WFL
Sbjct: 241 DAAAAAALQSPAGGFFNEGTLDFQAMEQSSCEWMAGDGGVVTSESLWSGAGDGADYLWFL 300

Query: 301 QQQLN 306
           QQQLN
Sbjct: 301 QQQLN 305

[Close]
BLAST of Lsi05G014070.1 vs. NCBI nr
Match: gi|659076990|ref|XP_008438973.1| (PREDICTED: transcription factor MYB108 [Cucumis melo])

HSP 1 Score: 549.3 bits (1414), Expect = 4.3e-153
Identity = 275/312 (88.14%), Postives = 286/312 (91.67%), Query Frame = 1 

Query: 1   MDGNKEKRFDSDTLHGGDDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRT 60
           MDGNK++ FDS TLHGG+DD +LRRGPWTVEEDI LINYIANHGDGRWNSLARCAGLKRT
Sbjct: 1   MDGNKDRMFDSGTLHGGEDDSDLRRGPWTVEEDIILINYIANHGDGRWNSLARCAGLKRT 60

Query: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120
           GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR
Sbjct: 61  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 120

Query: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVS----SAAVDGSSSYGSATP 180
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVS    SA VDGS SYGS TP
Sbjct: 121 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSVAASAVVDGSGSYGSVTP 180

Query: 181 TPPAVMMNGGSDFVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSC-FP 240
           TPPA+MMNGGSDFVSTPQVTP YTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSC FP
Sbjct: 181 TPPALMMNGGSDFVSTPQVTPSYTSENSSSGGGGGSSDGTQVSSVSELTDCYNNFSCNFP 240

Query: 241 VGYGHET-AAAPPLQSPAPG-FFNEGTLDFQAMEQSTCQWLAEDGGVDTSESLWNAAGAG 300
            GY  +  A A  +QSPA G FFNEGTLDFQAM+QS+C+W+A DGGVDTSESLWN  GAG
Sbjct: 241 AGYEQDAGAGAASMQSPAGGLFFNEGTLDFQAMQQSSCEWMAGDGGVDTSESLWN--GAG 300

Query: 301 ADYFWFLQQQLN 306
           ADYFWFLQQQLN
Sbjct: 301 ADYFWFLQQQLN 310

[Close]
BLAST of Lsi05G014070.1 vs. NCBI nr
Match: gi|224099087|ref|XP_002311369.1| (GmMYB12 family protein [Populus trichocarpa])

HSP 1 Score: 344.0 bits (881), Expect = 2.7e-91
Identity = 197/315 (62.54%), Postives = 215/315 (68.25%), Query Frame = 1 

Query: 21  GNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGN 80
           G+LRRGPWTVEED  LINYIA HG+GRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGN
Sbjct: 25  GDLRRGPWTVEEDFKLINYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVRRGN 84

Query: 81  ITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFK 140
           ITLEEQL+ILELHSRWGNRWSKIAQ LPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFK
Sbjct: 85  ITLEEQLMILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFK 144

Query: 141 DTMRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPAVMMN---------------- 200
           DTMRYLWMPRLVERIQAAA   A    +SS  +AT + PA   +                
Sbjct: 145 DTMRYLWMPRLVERIQAAA---ATATNTSSTSTATVSAPATNQHSISNRDVGTGNLVMAP 204

Query: 201 ---GGSDFVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSELTDCYNN----------- 260
               G+DF     VT  YT ENSS+      S  TQVS VS+LT  Y N           
Sbjct: 205 HGINGNDF-GVSHVTQSYTPENSST-AASSDSFATQVSPVSDLTTDYYNIPVNRNTNPDY 264

Query: 261 FSCFPVGYGHETAAAPPLQSPAPGFFNEGTLDFQAMEQSTCQWLAEDGGVDTSESLWNAA 306
           F    VGY  E+  +P      PGFFN G LDFQAME S+ QW  + G  DTS+++WN  
Sbjct: 265 FQAGQVGYS-ESMISP------PGFFNHG-LDFQAMEHSSNQWPMDSG--DTSDNMWN-- 319

[Close]
BLAST of Lsi05G014070.1 vs. NCBI nr
Match: gi|743798555|ref|XP_011010946.1| (PREDICTED: transcription factor MYB108-like [Populus euphratica])

HSP 1 Score: 342.4 bits (877), Expect = 8.0e-91
Identity = 193/323 (59.75%), Postives = 226/323 (69.97%), Query Frame = 1 

Query: 2   DGNKEKRFDSDTLHGGDDD-GNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRT 61
           +GN      S T    ++   +LRRGPWTVEED  LI+YIA HG+GRWNSLARCAGLKRT
Sbjct: 5   EGNSNSNSSSSTTQSDEEMMADLRRGPWTVEEDFKLIDYIATHGEGRWNSLARCAGLKRT 64

Query: 62  GKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWR 121
           GKSCRLRWLNYLRPDVRRGNITLEEQL+ILELHSRWGNRWSKIA  LPGRTDNEIKNYWR
Sbjct: 65  GKSCRLRWLNYLRPDVRRGNITLEEQLMILELHSRWGNRWSKIAHHLPGRTDNEIKNYWR 124

Query: 122 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAVSSAAVDGSSSYGSATPTPPA 181
           TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRL+ERIQAAA ++++   +S+  +A+     
Sbjct: 125 TRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLIERIQAAAAATSSSTTTSASPAASTNHHL 184

Query: 182 VMMNG-------------GSDFVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSELTDC 241
           +  NG             G+DF     VTP YT ENSS+      S  TQVS VS+LT  
Sbjct: 185 INNNGVGTGNLVMPHGVIGNDF-GVSHVTPSYTPENSST-AASSDSFATQVSPVSDLTTD 244

Query: 242 YNNFSCFPVGYG-----HETAAAPPLQSPAPGFFNEGTLDFQAMEQSTCQWLAEDGGVDT 301
           Y +    PV +       ++  +  L SPA G+FN+G LDFQAME ++ QWL E G  DT
Sbjct: 245 YYH---IPVNHNPNPDYFQSGYSESLISPA-GYFNQG-LDFQAMEHNSNQWLMESG--DT 304

Query: 302 SESLWNAAGAGADYFWFLQQQLN 306
           S++LWN      +  WFLQQQ+N
Sbjct: 305 SDNLWN-----PEDIWFLQQQMN 313

[Close]
BLAST of Lsi05G014070.1 vs. NCBI nr
Match: gi|590662235|ref|XP_007035892.1| (Myb domain protein 112 isoform 1 [Theobroma cacao])

HSP 1 Score: 340.1 bits (871), Expect = 4.0e-90
Identity = 196/308 (63.64%), Postives = 224/308 (72.73%), Query Frame = 1 

Query: 18  DDDGNLRRGPWTVEEDITLINYIANHGDGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 77
           +++ +LRRGPWTVEED  LINYIA HG+GRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR
Sbjct: 15  EEEMDLRRGPWTVEEDFKLINYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYLRPDVR 74

Query: 78  RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 137
           RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK
Sbjct: 75  RGNITLEEQLLILELHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSK 134

Query: 138 QFKDTMRYLWMPRLVERIQAAAVSSAAVDGSS---SYGSATPTPP------AVMMNG--G 197
           QFKDTMRYLWMPRL ERIQAAA ++ A   +S   +  SAT T P       V+ +G  G
Sbjct: 135 QFKDTMRYLWMPRLAERIQAAAAAATATSSTSVTTTSASATTTAPNVGTGQMVLPHGVLG 194

Query: 198 SDFVSTPQVTPGYTSENSSSGGGGGSSDGTQVSSVSEL-TDCYNNFSCF----PVGYGHE 257
           +DF    QVTP YT ENSS+      S GTQVS VS+L TD Y+N        P  Y   
Sbjct: 195 NDF-GRAQVTPSYTPENSST-AASSDSFGTQVSPVSDLTTDYYSNIPVSNNPNPDNYFQA 254

Query: 258 TAA--APPLQSPAPGFFNEGTLDFQAMEQSTCQ--WLAEDGGVDTSESLWNAAGAGADYF 306
           + A  +  L SP+  ++N G +DFQ+MEQ+     WL  DGG D S++ +N      + F
Sbjct: 255 SQAGYSDSLISPSGNYYNHG-MDFQSMEQNNTNNPWL--DGGDDASDNFFN-----PEDF 312

The following BLAST results are available for this feature:
BLAST of Lsi05G014070.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MY108_ARATH3.8e-7755.66Transcription factor MYB108 OS=Arabidopsis thaliana GN=MYB108 PE=1 SV=1[more]
MYB05_ANTMA1.6e-5182.73Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1[more]
MYB21_ARATH6.2e-5178.07Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1[more]
MYB24_ARATH2.6e-4978.18Transcription factor MYB24 OS=Arabidopsis thaliana GN=MYB24 PE=1 SV=1[more]
MYB40_ANTMA2.6e-4979.28Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1[more]
BLAST of Lsi05G014070.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5Y4_CUCSA4.5e-15788.85Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168940 PE=4 SV=1[more]
B9HIK1_POPTR1.9e-9162.54GmMYB12 family protein OS=Populus trichocarpa GN=POPTR_0008s10080g PE=4 SV=1[more]
A0A061EQ77_THECC2.8e-9063.64Myb domain protein 112 isoform 1 OS=Theobroma cacao GN=TCM_021433 PE=4 SV=1[more]
A5B5N9_VITVI2.2e-8763.04Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029107 PE=4 SV=1[more]
C3W4Q3_VITVI2.9e-8763.04R2R3 transcription factor MYB108-like protein 1 OS=Vitis vinifera PE=2 SV=1[more]
BLAST of Lsi05G014070.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06490.12.2e-7855.66 myb domain protein 108[more]
AT5G49620.21.8e-7754.40 myb domain protein 78[more]
AT1G48000.16.1e-6564.55 myb domain protein 112[more]
AT2G47190.12.6e-6360.91 myb domain protein 2[more]
AT1G68320.12.2e-5971.74 myb domain protein 62[more]
BLAST of Lsi05G014070.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778679114|ref|XP_011651090.1|6.4e-15788.85PREDICTED: transcription factor MYB108 [Cucumis sativus][more]
gi|659076990|ref|XP_008438973.1|4.3e-15388.14PREDICTED: transcription factor MYB108 [Cucumis melo][more]
gi|224099087|ref|XP_002311369.1|2.7e-9162.54GmMYB12 family protein [Populus trichocarpa][more]
gi|743798555|ref|XP_011010946.1|8.0e-9159.75PREDICTED: transcription factor MYB108-like [Populus euphratica][more]
gi|590662235|ref|XP_007035892.1|4.0e-9063.64Myb domain protein 112 isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR001005SANT/Myb
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0000785 chromatin
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Lsi05G014070Lsi05G014070gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi05G014070.1.five_prime_UTR.1Lsi05G014070.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi05G014070.1.CDS.1Lsi05G014070.1.CDS.1CDS
Lsi05G014070.1.CDS.2Lsi05G014070.1.CDS.2CDS
Lsi05G014070.1.CDS.3Lsi05G014070.1.CDS.3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Lsi05G014070.1.three_prime_UTR.1Lsi05G014070.1.three_prime_UTR.1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Lsi05G014070.1Lsi05G014070.1-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 25..72
score: 1.4E-16coord: 78..121
score: 2.1
IPR001005SANT/Myb domainSMARTSM00717santcoord: 77..125
score: 8.3E-14coord: 24..74
score: 1.1
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 80..126
score: 2.0E-22coord: 26..79
score: 3.8
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 22..119
score: 2.98
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 20..72
score: 16.086coord: 73..127
score: 22
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 18..184
score: 5.9E
NoneNo IPR availablePANTHERPTHR10641:SF494TRANSCRIPTION FACTOR MYB108coord: 18..184
score: 5.9E