BLAST of Lsi06G000100.1 vs. Swiss-Prot
Match:
RH3_ARATH (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana GN=RH3 PE=1 SV=2)
HSP 1 Score: 911.0 bits (2353), Expect = 8.5e-264
Identity = 503/708 (71.05%), Postives = 573/708 (80.93%), Query Frame = 1
Query: 1 MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
MAS +GV +++ P+L++ + + S SLS DK L + + +L
Sbjct: 1 MASTVGVPSLYQVPHLEISKP--NSKKRSNCLSLSL-DKPFFTPLSLVRRTRRIHSSSL- 60
Query: 61 GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
+ SA+ATPNS+LSEEAF+SL D D +D + N+ A D +ELAISK
Sbjct: 61 -LVPSAVATPNSVLSEEAFKSLGLSDHDEYD---LDGDNNNVEA------DDGEELAISK 120
Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
L LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE
Sbjct: 121 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 180
Query: 181 DDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALS 240
+ ++ RRS RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY QQ+AL+
Sbjct: 181 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALT 240
Query: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQN 300
RGVDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+
Sbjct: 241 RGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQS 300
Query: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360
MLFSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+T
Sbjct: 301 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT 360
Query: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420
VYAKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVA
Sbjct: 361 VYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVA 420
Query: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480
TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLE
Sbjct: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLE 480
Query: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAA 540
RDVGC FEF +PP + ++LESSA+QVV TL GVHP+SI+FF TAQKL +E+G ALAAA
Sbjct: 481 RDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAA 540
Query: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG 600
LA LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y AADEVG
Sbjct: 541 LAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVG 600
Query: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDD 660
KI LIAD+RI GAVFDLPEEIAKELL K++PEGN++ +TK LPPLQDD
Sbjct: 601 KIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITK------------LPPLQDD 660
Query: 661 GPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDD---DDDQ 705
GP SDNYGRFSSR+R R RG R RG GSSR D DDD+
Sbjct: 661 GPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDR 680
BLAST of Lsi06G000100.1 vs. Swiss-Prot
Match:
RH3_ORYSJ (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2)
HSP 1 Score: 898.7 bits (2321), Expect = 4.4e-260
Identity = 480/678 (70.80%), Postives = 549/678 (80.97%), Query Frame = 1
Query: 28 ASPTPSLSFADKSHLIALKALTCFSASNRRNLSG---FISSAIATPNSILSEEAFRSLDG 87
++P+ S + A +L+ F R G + AIA+PNS+LSE AF+ L
Sbjct: 13 SNPSASAAAAGAGAAPSLRLRAAFRCWALRRAGGGRWAAAGAIASPNSVLSEHAFKRLQL 72
Query: 88 FSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISKLHLPQRLTDALQKRGITHLFPIQR 147
++ ++ + D+DELAI++L LP++L L+KRGITHLFPIQR
Sbjct: 73 SDEEEEEEEGAYGSDEEGVEAVGGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQR 132
Query: 148 AVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRE 207
AVL+PAL+GRDLIARAKTGTGKTLAFGIP++K+L E+D+ RS RR R+PRVLVL PTRE
Sbjct: 133 AVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRR-GRIPRVLVLAPTRE 192
Query: 208 LAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLG 267
LAKQVEKEIKESAP L+TVCVYGGVSY QQNALSRGVDVVVGTPGRIIDLING SL LG
Sbjct: 193 LAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLG 252
Query: 268 EVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTI 327
EV+YLVLDEADQMLAVGFEEDVE IL++LP++RQ+MLFSATMP WVKKL+R+YL NPLTI
Sbjct: 253 EVKYLVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTI 312
Query: 328 DLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLAL 387
DLVGDQDEKLAEGIKL+AI T+TSK+T+L DL+TVYAKGGKTIVFT+TKRDADEVSLAL
Sbjct: 313 DLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLAL 372
Query: 388 ANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDP 447
NSI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDP
Sbjct: 373 TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 432
Query: 448 ETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQ 507
ETFVHRSGRTGRAGK GTAILMFTNSQRRTVRSLERDVGC+F+F +PPAIE+VLESSAE
Sbjct: 433 ETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEH 492
Query: 508 VVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVT 567
V+ TLRGVH ESI++FIP A++L +E GP ALA+ALA LSGFS PPSSRSLI+HEQGWVT
Sbjct: 493 VIATLRGVHTESIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVT 552
Query: 568 LQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKEL 627
LQLTRDP Y RGF S RSVTGFLSD+ S AADEVGKI L ADE++ GAVFDLPEEIA++L
Sbjct: 553 LQLTRDPGYGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDL 612
Query: 628 LNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDGPPSDNYGRFSSRERNSRNSSRDRR 687
L+ ELP GNTI KVTK LP LQDDGP +D+YGRFS+ +R RN R R
Sbjct: 613 LSMELPPGNTITKVTK------------LPALQDDGPATDSYGRFSNSDRGFRN-RRSRG 672
Query: 688 GYRTSRGWGSSRDSDDDD 703
G SRG DSD +D
Sbjct: 673 G--GSRGGRGGWDSDGED 674
BLAST of Lsi06G000100.1 vs. Swiss-Prot
Match:
RH53_ARATH (DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana GN=RH53 PE=2 SV=1)
HSP 1 Score: 470.3 bits (1209), Expect = 3.8e-131
Identity = 238/392 (60.71%), Postives = 298/392 (76.02%), Query Frame = 1
Query: 114 DELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 173
D LAIS+L + + AL +GI LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIP
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161
Query: 174 ILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 233
I+ K+ + + R R P LVL PTRELA+QVEKE +ESAP L+T+C+YGG
Sbjct: 162 IIDKIIKYNAKHG---RGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQ 221
Query: 234 QQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 293
Q L GVDV VGTPGR+IDL+ +LNL EV+++VLDEADQML VGF EDVE+ILEKL
Sbjct: 222 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 281
Query: 294 PSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 353
P +RQ+M+FSATMP+W++ L +KYL NPLT+DLVGD D+KLA+GI ++I+ + + +I
Sbjct: 282 PEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASI 341
Query: 354 LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 413
+ LVT +AKGGK IVFTQTKRDAD +S ALA S EALHGDISQ QRERTL GFR G
Sbjct: 342 IGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGH 401
Query: 414 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 473
F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+++ Q R
Sbjct: 402 FNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSR 461
Query: 474 TVRSLERDVGCKFEFANPPAIEEVLESSAEQV 506
V+ +ER+VG +F A+E S E +
Sbjct: 462 AVKIIEREVGSRFTELPSIAVERGSASMFEGI 490
BLAST of Lsi06G000100.1 vs. Swiss-Prot
Match:
RH53_ORYSJ (DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0143700 PE=2 SV=2)
HSP 1 Score: 468.0 bits (1203), Expect = 1.9e-130
Identity = 239/396 (60.35%), Postives = 303/396 (76.52%), Query Frame = 1
Query: 106 SAAPPADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTG 165
+ A DD L +++L + + + L RGIT LFPIQRAVL PA++G+D+I RA+TGTG
Sbjct: 74 AGAAVGGDDGLEVARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTG 133
Query: 166 KTLAFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCV 225
KTLAFGIPI+ ++ +E S R P ++L PTRELA+QVEKE KESAP L+++CV
Sbjct: 134 KTLAFGIPIMDRILRHNEKNGSGRN---PLAIILAPTRELARQVEKEFKESAP-LDSLCV 193
Query: 226 YGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEED 285
YGGV Q AL+ GVDVVVGTPGRIIDL+ LNL E++++VLDEADQMLAVGF+ED
Sbjct: 194 YGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDED 253
Query: 286 VEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILT 345
VEVI+E LP RQ+MLFSATMP+W++K+ KYL++P+ IDLVGD+D+KL EGI L++I +
Sbjct: 254 VEVIMENLPQNRQSMLFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIAS 313
Query: 346 TATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERT 405
K +IL L+ +A GGK IVFTQTKR+AD ++ A+ S +ALHGDISQ+QRERT
Sbjct: 314 EHYGKPSILGPLIKEHANGGKCIVFTQTKREADRLAYAMGRSYACQALHGDISQNQRERT 373
Query: 406 LNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAIL 465
L+GFR G+F +LVATDVA+RGLDIPNVDLVIHYELPN E FVHRSGRT RAGK+G+AIL
Sbjct: 374 LSGFRDGRFNILVATDVAARGLDIPNVDLVIHYELPNTSELFVHRSGRTARAGKKGSAIL 433
Query: 466 MFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESS 502
++TN Q R VR +E+D+GCK F P IE E+S
Sbjct: 434 IYTNDQARAVRIIEQDIGCK--FTELPKIEVADEAS 463
BLAST of Lsi06G000100.1 vs. Swiss-Prot
Match:
RH9_ARATH (DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana GN=RH9 PE=2 SV=1)
HSP 1 Score: 460.7 bits (1184), Expect = 3.0e-128
Identity = 243/435 (55.86%), Postives = 311/435 (71.49%), Query Frame = 1
Query: 71 NSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISKLHLPQRLTDA 130
+SI+S F + + D + DSE S D LAI+ L + + A
Sbjct: 78 SSIVSSAGFAAQEYAPSYENDGGIGDSE-------SVGSSGGGDGLAIADLGISPEIVKA 137
Query: 131 LQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRR 190
L+ RGI LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIPI+ K+ + + R
Sbjct: 138 LKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHG---R 197
Query: 191 SRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPG 250
+ P+ LVL PTRELA+QVEKE +ESAP L+T+C+YGG Q L+ G+DV VGTPG
Sbjct: 198 GKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPG 257
Query: 251 RIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWV 310
RIIDL+ +LNL EV+++VLDEADQML VGF EDVE+IL+KLP++RQ+M+FSATMP+W+
Sbjct: 258 RIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWI 317
Query: 311 KKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVF 370
+ L +KYL NPLTIDLVGD D+KLA+GI +++I + + +I+ LV + KGGK IVF
Sbjct: 318 RSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVF 377
Query: 371 TQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 430
TQTKRDAD ++ LA S EALHGDISQ QRERTL GFR G F++LVATDVA+RGLD+P
Sbjct: 378 TQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVP 437
Query: 431 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFAN 490
NVDLVIHYELPN+ ETFVHR+GRTGRAGK+G+AIL+ Q R V+ +E++VG +F
Sbjct: 438 NVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELP 497
Query: 491 PPAIEEVLESSAEQV 506
A+E S E V
Sbjct: 498 SIAVERGSASMFEGV 502
BLAST of Lsi06G000100.1 vs. TrEMBL
Match:
A0A0A0M1E9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560830 PE=4 SV=1)
HSP 1 Score: 1252.7 bits (3240), Expect = 0.0e+00
Identity = 653/703 (92.89%), Postives = 671/703 (95.45%), Query Frame = 1
Query: 1 MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
MASLLGVTAI HAPNLD+YRR GTTATASPTPSLSF DKSHLIALK TCFS S+RRNLS
Sbjct: 1 MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
Query: 61 GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
GF SSAIATPNSILSEEAFRS DGFS+DSLDDNLID EPNSSLAF+A DDDELAISK
Sbjct: 61 GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAA----DDDELAISK 120
Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
L+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE
Sbjct: 121 LNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
Query: 181 DDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
DDESRS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSR
Sbjct: 181 DDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSR 240
Query: 241 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
GVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM
Sbjct: 241 GVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
Query: 301 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
LFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV
Sbjct: 301 LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
Query: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
Query: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER
Sbjct: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
Query: 481 DVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAAL 540
DVGCKFEFANPP +EEVL+SSAEQVVVTLRGVHPESIE+F PTAQKLIDEQG GALAAAL
Sbjct: 481 DVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGALAAAL 540
Query: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGK 600
AQLSGF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADE+GK
Sbjct: 541 AQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADEIGK 600
Query: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDG 660
IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILK+TK LPPLQDDG
Sbjct: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITK------------LPPLQDDG 660
Query: 661 PPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
PPSDNYGRFS RER+SRNSSRDRRG +TSRGWGSSRDSDD+ D
Sbjct: 661 PPSDNYGRFSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGD 687
BLAST of Lsi06G000100.1 vs. TrEMBL
Match:
W9QXY0_9ROSA (DEAD-box ATP-dependent RNA helicase 3 OS=Morus notabilis GN=L484_022683 PE=4 SV=1)
HSP 1 Score: 1022.3 bits (2642), Expect = 2.9e-295
Identity = 550/708 (77.68%), Postives = 606/708 (85.59%), Query Frame = 1
Query: 1 MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIA-LKALTCFSASNRRNL 60
MAS++GV++I+ P+L+ YRR+ AT+SP+ SL F DKSH + L+A C S S+ R
Sbjct: 1 MASIIGVSSIYQTPSLEPYRRVAA-ATSSPS-SLPFPDKSHFNSVLRAYNCKSGSSSR-- 60
Query: 61 SGFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAIS 120
++SAIATPNS+LSEEAF+ L FSKDS + D + S DDDELAIS
Sbjct: 61 --LVASAIATPNSVLSEEAFKGLGDFSKDSFSGDEED-DYESEEGEPGEASVDDDELAIS 120
Query: 121 KLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180
KL LPQRL D+L+KRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI+K+LT
Sbjct: 121 KLGLPQRLVDSLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLT 180
Query: 181 EDDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNAL 240
EDDE R SRRRS RLP+ LVL PTRELAKQVEKEIKESAP+LNTVCVYGGVSY+TQQNAL
Sbjct: 181 EDDEQRGSRRRSSRLPKGLVLAPTRELAKQVEKEIKESAPHLNTVCVYGGVSYITQQNAL 240
Query: 241 SRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQ 300
SRGVDVVVGTPGR+IDLING SL LGEV+YLVLDEADQMLAVGFEEDVEVILEKLPS+RQ
Sbjct: 241 SRGVDVVVGTPGRLIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQ 300
Query: 301 NMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLV 360
+MLFSATMP+WVKKLARKYL+NPLTIDLVG++DEKLAEGIKL+AI TTATSK+TIL DLV
Sbjct: 301 SMLFSATMPSWVKKLARKYLDNPLTIDLVGERDEKLAEGIKLYAISTTATSKRTILSDLV 360
Query: 361 TVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLV 420
TVYAKGGKTIVFTQTKRDADEVS+AL NSI SEALHGDISQHQRERTLNGFRQGKFTVLV
Sbjct: 361 TVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLV 420
Query: 421 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSL 480
ATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT+SQRRTVRSL
Sbjct: 421 ATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 480
Query: 481 ERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAA 540
ERDVGCKFEF +PP+IEEVLESSAE VV TL GVH ES+EFF PTAQKLI+EQG ALAA
Sbjct: 481 ERDVGCKFEFVSPPSIEEVLESSAEHVVATLSGVHAESVEFFTPTAQKLIEEQGTSALAA 540
Query: 541 ALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEV 600
ALAQLSGF+ PPSSRSLINHEQG VTLQL RDP++SRGFLSARSVTGFLSD+YS AADE+
Sbjct: 541 ALAQLSGFARPPSSRSLINHEQGLVTLQLIRDPAFSRGFLSARSVTGFLSDVYSAAADEL 600
Query: 601 GKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQD 660
GK++L+ADER+ AVFDLPEEIAKELLN+ELP GNTI K+TK LPPLQD
Sbjct: 601 GKVYLVADERVQSAVFDLPEEIAKELLNRELPSGNTISKITK------------LPPLQD 660
Query: 661 DGPPSDNYGRFSSRE----RNSRNSSRDRRGYRTSRGWGSSRDSDDDD 703
DGP SD YGRFSSRE R SR SR R G+R SRG G D+DD
Sbjct: 661 DGPASDYYGRFSSREHGGDRGSRRGSRGRGGFRGSRGRGGGFSDDEDD 689
BLAST of Lsi06G000100.1 vs. TrEMBL
Match:
D7UAC9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00060 PE=4 SV=1)
HSP 1 Score: 1014.6 bits (2622), Expect = 6.1e-293
Identity = 541/707 (76.52%), Postives = 606/707 (85.71%), Query Frame = 1
Query: 2 ASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKA---LTCFSASNRRN 61
+S++GV++++ L++ RR T++ + SL F+DK+HL KA AS RR+
Sbjct: 3 SSIIGVSSVYQTTALELSRR-----TSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 62
Query: 62 LS---GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDE 121
F+ SAIATPNS+LSEEAF+ L GFSKD LD D + + + SAA A +DE
Sbjct: 63 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAA--AQEDE 122
Query: 122 LAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIL 181
LA+++L LP RL ++L++RGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI+
Sbjct: 123 LALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPII 182
Query: 182 KKLTEDDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQ 241
K+L+EDDE R+S+RRS RLPRVLVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY+TQ
Sbjct: 183 KRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYITQ 242
Query: 242 QNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLP 301
QNALSRGVDVVVGTPGRIIDLI GNSL LGEV+ LVLDEADQMLAVGFEEDVEVILEKLP
Sbjct: 243 QNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVGFEEDVEVILEKLP 302
Query: 302 SQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTIL 361
S+RQ+MLFSATMP WVKKLARKYL+NPLTIDLVGD DEKLAEGIKL+AI TTATSK+TIL
Sbjct: 303 SERQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDHDEKLAEGIKLYAIPTTATSKRTIL 362
Query: 362 RDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKF 421
DL+TVYAKGGKTIVFTQTKRDADEVS+AL NSI SEALHGDISQHQRERTLNGFRQGKF
Sbjct: 363 SDLITVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKF 422
Query: 422 TVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRT 481
TVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEGTAILMFT+SQRRT
Sbjct: 423 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 482
Query: 482 VRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPG 541
V+SLERDVGCKFEF +PPAIEEVLESSAEQVV TL GVHPES+EFF PTAQKLI+E+G G
Sbjct: 483 VKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEFFTPTAQKLIEEKGTG 542
Query: 542 ALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPA 601
ALAAALA LSGFS PPS RSLI+HEQGWVTLQLTRD YSRGFLSARSVTGFLSD+Y A
Sbjct: 543 ALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYPTA 602
Query: 602 ADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLP 661
ADE+GKI+L+ADER+ GAVFDLPEEIAKELLNK++P GNTI K+TK LP
Sbjct: 603 ADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKITK------------LP 662
Query: 662 PLQDDGPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDD 702
LQDDGP D YGRFS+R+R+SR SR+RRG R SRG GSS SDDD
Sbjct: 663 ALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDD 690
BLAST of Lsi06G000100.1 vs. TrEMBL
Match:
M5W8A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001778mg PE=4 SV=1)
HSP 1 Score: 1003.0 bits (2592), Expect = 1.8e-289
Identity = 536/718 (74.65%), Postives = 604/718 (84.12%), Query Frame = 1
Query: 1 MASLLGVTAIH-HAPNLDMYRRMG------TTATASPTPSLSFADKSHLIALKALTCFSA 60
M S++GV++I+ P ++YRR T T+SP+ SL+F ++ H ++ +
Sbjct: 1 MTSIIGVSSIYPQTPCSELYRRAAASTTTTTATTSSPSLSLAFPERPHFNSVLR----AK 60
Query: 61 SNRRNLSGFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADD 120
S S ++SAIATPNS+LSEEAF+ L GFSKDSLD DSE +S A+ DD
Sbjct: 61 SGLVRQSSLVASAIATPNSVLSEEAFKGLGGFSKDSLDS---DSEYDSETE-PASAAGDD 120
Query: 121 DELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 180
DELA+SKL LPQRL D+L+KRGI+ LFPIQRAVLVPALEGRD+IARAKTGTGKTLAFGIP
Sbjct: 121 DELALSKLGLPQRLVDSLEKRGISSLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIP 180
Query: 181 ILKKLTEDDESRSSRRRSR-LPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYV 240
ILK+LTEDDE RSS RR+ LPRVLVL PTRELAKQVEKEIKESAPYLNTVCVYGGVSY+
Sbjct: 181 ILKRLTEDDEQRSSHRRTGYLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYI 240
Query: 241 TQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEK 300
TQQ+ALSRGVDVVVGTPGRIIDLINGNSL LGEV+YLVLDEAD MLAVGFEEDVEVIL+K
Sbjct: 241 TQQSALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADSMLAVGFEEDVEVILQK 300
Query: 301 LPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQT 360
LP+QRQ+MLFSATMP WVKKLARKYL+NPLTIDLVGDQ+EKLAEGIKL+A+ TT +SK+T
Sbjct: 301 LPTQRQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDQEEKLAEGIKLYALSTTGSSKRT 360
Query: 361 ILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQG 420
IL DL+TVYAKGGKTIVFTQTKRDADEVS++L SI SEALHGDISQHQRERTLNGFRQG
Sbjct: 361 ILSDLITVYAKGGKTIVFTQTKRDADEVSMSLTTSIASEALHGDISQHQRERTLNGFRQG 420
Query: 421 KFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQR 480
KFTVLVATDVASRGLDIPNVDLVIHYELPND ETFVHRSGRTGRAGK+GTA+LMFTN+QR
Sbjct: 421 KFTVLVATDVASRGLDIPNVDLVIHYELPNDSETFVHRSGRTGRAGKQGTAVLMFTNNQR 480
Query: 481 RTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQG 540
RTVR+LERDVGCKFEF +PP IEEVLESSA+ VV TL GVHPES++FF PTAQKLIDEQG
Sbjct: 481 RTVRTLERDVGCKFEFVSPPTIEEVLESSAQHVVATLSGVHPESVQFFTPTAQKLIDEQG 540
Query: 541 PGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYS 600
ALAAALAQLSGFS PPSSRSLI HEQGW TLQ+ RDP+++RGFLSARSVTGFLSD+YS
Sbjct: 541 TNALAAALAQLSGFSRPPSSRSLITHEQGWTTLQIIRDPAFARGFLSARSVTGFLSDVYS 600
Query: 601 PAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQ 660
AADEVGKIH+IADER+ GAVFDLPEEIAKELLN+++P GNTI K+ K
Sbjct: 601 AAADEVGKIHIIADERVQGAVFDLPEEIAKELLNRQIPPGNTISKINK------------ 660
Query: 661 LPPLQDDGPPSDNYGRFSSRERNS-RNSSRDRR---GYRTSRGWGSSRDSDDDDDQAG 707
LP LQDDGP +D YGRFS R+RNS R SRDR+ G+R+SRGWGSS +DD G
Sbjct: 661 LPALQDDGPVNDYYGRFSGRDRNSRRGGSRDRQGSSGFRSSRGWGSSDGADDSFRSGG 698
BLAST of Lsi06G000100.1 vs. TrEMBL
Match:
B9RFT3_RICCO (Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_1437190 PE=4 SV=1)
HSP 1 Score: 998.4 bits (2580), Expect = 4.5e-288
Identity = 533/713 (74.75%), Postives = 595/713 (83.45%), Query Frame = 1
Query: 2 ASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNL-- 61
+S+LGV++I H P++++ R T S T S+ DK H +L +C +N+
Sbjct: 4 SSVLGVSSIFHTPSVELSSRK----TNSTTLSIPTTDKPHFNSLVLQSCSLYNNKHGHGH 63
Query: 62 --SGFISSAIATPNSILSEEAFRSLDG----FSKDSLDDNLIDSEPNSSLAFSAAPPADD 121
S F++SAIA PNSILSEEAF+ L G F +D +D++ A + P DD
Sbjct: 64 GHSSFVTSAIAAPNSILSEEAFKGLGGRLSDFDEDEDNDDVSSGGYEDDGAGESLP--DD 123
Query: 122 DELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 181
DELAISKL LPQRL ++L+KRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP
Sbjct: 124 DELAISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 183
Query: 182 ILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 241
I+K +TEDD+S S RR RLPRVLVL PTRELAKQVEKEI ESAPYL+TVCVYGGVSY+T
Sbjct: 184 IIKCITEDDKS-SQRRTGRLPRVLVLAPTRELAKQVEKEINESAPYLSTVCVYGGVSYIT 243
Query: 242 QQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 301
Q+NALSRGVDVVVGTPGRIIDLIN SL LGEVEYLVLDEADQML+ GFEEDVEVILE L
Sbjct: 244 QRNALSRGVDVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENL 303
Query: 302 PSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 361
PS+RQ+MLFSATMPTWVKKLARKYL+NPL IDLVGDQ+EKLAEGIKL+AI T ATSK++I
Sbjct: 304 PSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYAISTNATSKRSI 363
Query: 362 LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 421
L DLVTVYAKGGKTI+FTQTKRDADEVS+ L NSI SEALHGDISQHQRERTLNGFRQGK
Sbjct: 364 LSDLVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALHGDISQHQRERTLNGFRQGK 423
Query: 422 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 481
FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTA+LMFT+SQRR
Sbjct: 424 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAVLMFTSSQRR 483
Query: 482 TVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGP 541
TV+SLERDVGC+FEF +PP EEVLESSAEQV+ TL GVHPES+ FF PTAQ+LI+EQG
Sbjct: 484 TVKSLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHPESVGFFTPTAQRLIEEQGT 543
Query: 542 GALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSP 601
ALAAALAQLSGFS PPSSRSLI+HEQGW TLQLTRDPSYSRGFLSARSVTGFLSD+Y+
Sbjct: 544 SALAAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYSRGFLSARSVTGFLSDVYTA 603
Query: 602 AADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQL 661
AADEVGKIH+IADE++ GAVFDLPEEIAKELLNK+LP GNTI K+TK L
Sbjct: 604 AADEVGKIHIIADEKVQGAVFDLPEEIAKELLNKQLPPGNTISKITK------------L 663
Query: 662 PPLQDDGPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWG---SSRDSDDDDD 704
P LQDDGPPSD YGRFSSR+R R R +RG R+S+GWG R+SDDDDD
Sbjct: 664 PSLQDDGPPSDFYGRFSSRDRPPRGGGRGQRGSRSSQGWGGGRGGRNSDDDDD 697
BLAST of Lsi06G000100.1 vs. TAIR10
Match:
AT5G26742.2 (AT5G26742.2 DEAD box RNA helicase (RH3))
HSP 1 Score: 911.0 bits (2353), Expect = 4.8e-265
Identity = 503/708 (71.05%), Postives = 573/708 (80.93%), Query Frame = 1
Query: 1 MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
MAS +GV +++ P+L++ + + S SLS DK L + + +L
Sbjct: 1 MASTVGVPSLYQVPHLEISKP--NSKKRSNCLSLSL-DKPFFTPLSLVRRTRRIHSSSL- 60
Query: 61 GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
+ SA+ATPNS+LSEEAF+SL D D +D + N+ A D +ELAISK
Sbjct: 61 -LVPSAVATPNSVLSEEAFKSLGLSDHDEYD---LDGDNNNVEA------DDGEELAISK 120
Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
L LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE
Sbjct: 121 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 180
Query: 181 DDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALS 240
+ ++ RRS RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY QQ+AL+
Sbjct: 181 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALT 240
Query: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQN 300
RGVDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+
Sbjct: 241 RGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQS 300
Query: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360
MLFSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+T
Sbjct: 301 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT 360
Query: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420
VYAKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVA
Sbjct: 361 VYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVA 420
Query: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480
TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLE
Sbjct: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLE 480
Query: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAA 540
RDVGC FEF +PP + ++LESSA+QVV TL GVHP+SI+FF TAQKL +E+G ALAAA
Sbjct: 481 RDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAA 540
Query: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG 600
LA LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y AADEVG
Sbjct: 541 LAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVG 600
Query: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDD 660
KI LIAD+RI GAVFDLPEEIAKELL K++PEGN++ +TK LPPLQDD
Sbjct: 601 KIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITK------------LPPLQDD 660
Query: 661 GPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDD---DDDQ 705
GP SDNYGRFSSR+R R RG R RG GSSR D DDD+
Sbjct: 661 GPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDR 680
BLAST of Lsi06G000100.1 vs. TAIR10
Match:
AT3G22330.1 (AT3G22330.1 putative mitochondrial RNA helicase 2)
HSP 1 Score: 470.3 bits (1209), Expect = 2.2e-132
Identity = 238/392 (60.71%), Postives = 298/392 (76.02%), Query Frame = 1
Query: 114 DELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 173
D LAIS+L + + AL +GI LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIP
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161
Query: 174 ILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 233
I+ K+ + + R R P LVL PTRELA+QVEKE +ESAP L+T+C+YGG
Sbjct: 162 IIDKIIKYNAKHG---RGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQ 221
Query: 234 QQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 293
Q L GVDV VGTPGR+IDL+ +LNL EV+++VLDEADQML VGF EDVE+ILEKL
Sbjct: 222 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 281
Query: 294 PSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 353
P +RQ+M+FSATMP+W++ L +KYL NPLT+DLVGD D+KLA+GI ++I+ + + +I
Sbjct: 282 PEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASI 341
Query: 354 LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 413
+ LVT +AKGGK IVFTQTKRDAD +S ALA S EALHGDISQ QRERTL GFR G
Sbjct: 342 IGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGH 401
Query: 414 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 473
F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+++ Q R
Sbjct: 402 FNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSR 461
Query: 474 TVRSLERDVGCKFEFANPPAIEEVLESSAEQV 506
V+ +ER+VG +F A+E S E +
Sbjct: 462 AVKIIEREVGSRFTELPSIAVERGSASMFEGI 490
BLAST of Lsi06G000100.1 vs. TAIR10
Match:
AT3G22310.1 (AT3G22310.1 putative mitochondrial RNA helicase 1)
HSP 1 Score: 460.7 bits (1184), Expect = 1.7e-129
Identity = 243/435 (55.86%), Postives = 311/435 (71.49%), Query Frame = 1
Query: 71 NSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISKLHLPQRLTDA 130
+SI+S F + + D + DSE S D LAI+ L + + A
Sbjct: 78 SSIVSSAGFAAQEYAPSYENDGGIGDSE-------SVGSSGGGDGLAIADLGISPEIVKA 137
Query: 131 LQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRR 190
L+ RGI LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIPI+ K+ + + R
Sbjct: 138 LKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFNAKHG---R 197
Query: 191 SRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPG 250
+ P+ LVL PTRELA+QVEKE +ESAP L+T+C+YGG Q L+ G+DV VGTPG
Sbjct: 198 GKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPG 257
Query: 251 RIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWV 310
RIIDL+ +LNL EV+++VLDEADQML VGF EDVE+IL+KLP++RQ+M+FSATMP+W+
Sbjct: 258 RIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWI 317
Query: 311 KKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVF 370
+ L +KYL NPLTIDLVGD D+KLA+GI +++I + + +I+ LV + KGGK IVF
Sbjct: 318 RSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVF 377
Query: 371 TQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 430
TQTKRDAD ++ LA S EALHGDISQ QRERTL GFR G F++LVATDVA+RGLD+P
Sbjct: 378 TQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVP 437
Query: 431 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFAN 490
NVDLVIHYELPN+ ETFVHR+GRTGRAGK+G+AIL+ Q R V+ +E++VG +F
Sbjct: 438 NVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELP 497
Query: 491 PPAIEEVLESSAEQV 506
A+E S E V
Sbjct: 498 SIAVERGSASMFEGV 502
BLAST of Lsi06G000100.1 vs. TAIR10
Match:
AT5G62190.1 (AT5G62190.1 DEAD box RNA helicase (PRH75))
HSP 1 Score: 341.3 bits (874), Expect = 1.5e-93
Identity = 230/595 (38.66%), Postives = 333/595 (55.97%), Query Frame = 1
Query: 113 DDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGI 172
D+ A+SK + L + L+ GI LFPIQ + L+G DL+ RA+TG GKTLAF +
Sbjct: 93 DNPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVL 152
Query: 173 PILKKLTEDD-ESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKE--SAPYLNTVCVYGGV 232
PIL+ L +S+ R P VLVL PTRELAKQV + + L++ C+YGG
Sbjct: 153 PILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGD 212
Query: 233 SYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVI 292
SY Q+ L RGVD+VVGTPGRI D I +L+ +++ VLDEAD+ML +GF EDVE+I
Sbjct: 213 SYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELI 272
Query: 293 LEKLPSQR--QNMLFSATMPTWVKKLARKYLE-NPLTIDLVGDQDEKLAEGIKLHAILTT 352
L K+ Q +LFSAT+P+WVK ++ ++L+ + TIDLVG+ K + ++ AI
Sbjct: 273 LGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAIPCN 332
Query: 353 ATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTL 412
+ ++ D+++ Y+ GG+TI+F +TK E+S L S ALHG+I Q QRE TL
Sbjct: 333 KAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGS---RALHGEIPQSQREVTL 392
Query: 413 NGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILM 472
GFR GKF LVAT+VA+RGLDI +V L+I E P + E ++HRSGRTGRAG G A+ +
Sbjct: 393 AGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTL 452
Query: 473 FTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQK 532
+ +S++ +V +E++ G KFE P +E+ S + ++ V + F+ A++
Sbjct: 453 Y-DSRKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLEAAKE 512
Query: 533 LIDEQGPGA---LAAALAQLSGFSHPPSSRSLINHEQGWVTLQL-TRDPSYSRGFLSARS 592
L++ G A LA ALA+ +GF+ RSL+ + +VTL L P YS F
Sbjct: 513 LLETSGLSAEVLLAKALAKTAGFTE-IKKRSLLTSMENYVTLHLEAGKPIYSPSF----- 572
Query: 593 VTGFLSDIY-SPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKN 652
V G L + + + + L AD+ GAVFD+ K+ I K+
Sbjct: 573 VYGLLRRVLPDDKVEMIEGLSLTADK--TGAVFDV----------KQSDLDLFIAGAQKS 632
Query: 653 VGTCSILRLLQLPPLQDDGP-PSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSS 696
G+ S+ + +P LQ+ P P +G R +R G RG G S
Sbjct: 633 AGSMSLEVVKVMPKLQEREPLPQKRFGG-GGRGNRFGGGGGNRFGGGGGRGRGGS 664
BLAST of Lsi06G000100.1 vs. TAIR10
Match:
AT3G01540.2 (AT3G01540.2 DEAD box RNA helicase 1)
HSP 1 Score: 248.8 bits (634), Expect = 1.0e-65
Identity = 148/381 (38.85%), Postives = 222/381 (58.27%), Query Frame = 1
Query: 124 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 183
P L + G + PIQ A++GRD++A AKTG+GKTL + IP L
Sbjct: 166 PPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL----- 225
Query: 184 SRSSRRRSRL-PRVLVLTPTRELAKQVEKEIKE--SAPYLNTVCVYGGVSYVTQQNALSR 243
+ R SR+ P +LVL+PTRELA Q+++E + + ++ C+YGG Q L R
Sbjct: 226 -QRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLER 285
Query: 244 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 303
G D+VV TPGR+ D++ ++L ++ YLVLDEAD+ML +GFE + I++++P++RQ +
Sbjct: 286 GADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTL 345
Query: 304 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLA-EGIKLHAILTTATSKQTILRDLVT 363
+++AT P V+K+A L NP ++ +G+ DE +A + I H + KQ L ++
Sbjct: 346 MYTATWPKGVRKIAADLLVNPAQVN-IGNVDELVANKSITQHIEVVAPMEKQRRLEQILR 405
Query: 364 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 423
G K I+F TKR D+++ L + A+HGD SQ +R+ LN FR G+ VLVA
Sbjct: 406 SQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 465
Query: 424 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 483
TDVA+RGLD+ ++ V++Y+ PN E +VHR GRTGRAG G A F + + L
Sbjct: 466 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLI 525
Query: 484 RDVGCKFEFAN---PPAIEEV 498
+ + E AN PP I E+
Sbjct: 526 KIL----EGANQRVPPQIREM 535
BLAST of Lsi06G000100.1 vs. NCBI nr
Match:
gi|659099231|ref|XP_008450498.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo])
HSP 1 Score: 1277.3 bits (3304), Expect = 0.0e+00
Identity = 667/703 (94.88%), Postives = 676/703 (96.16%), Query Frame = 1
Query: 1 MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSF DKSHLIALK TCFS S+RRNLS
Sbjct: 1 MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
Query: 61 GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
GF SSAIATPNSILSEEAFRSLDGFSKD LDDNLID EPNSSLAFSA DDDELAISK
Sbjct: 61 GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSA----DDDELAISK 120
Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
L+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE
Sbjct: 121 LNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
Query: 181 DDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
DDESRS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR
Sbjct: 181 DDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
Query: 241 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
GVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM
Sbjct: 241 GVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
Query: 301 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
LFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV
Sbjct: 301 LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
Query: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
Query: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER
Sbjct: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
Query: 481 DVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAAL 540
DVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+F PTAQKLIDEQGPGALAAAL
Sbjct: 481 DVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAAL 540
Query: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGK 600
AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADE+GK
Sbjct: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGK 600
Query: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDG 660
IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK LPPLQDDG
Sbjct: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK------------LPPLQDDG 660
Query: 661 PPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
PPSDNYGRFS RERNSRNSSRDRRG+RTSRGWGSSRDSDDD D
Sbjct: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGD 687
BLAST of Lsi06G000100.1 vs. NCBI nr
Match:
gi|449435589|ref|XP_004135577.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis sativus])
HSP 1 Score: 1252.7 bits (3240), Expect = 0.0e+00
Identity = 653/703 (92.89%), Postives = 671/703 (95.45%), Query Frame = 1
Query: 1 MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
MASLLGVTAI HAPNLD+YRR GTTATASPTPSLSF DKSHLIALK TCFS S+RRNLS
Sbjct: 1 MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60
Query: 61 GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
GF SSAIATPNSILSEEAFRS DGFS+DSLDDNLID EPNSSLAF+A DDDELAISK
Sbjct: 61 GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAA----DDDELAISK 120
Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
L+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE
Sbjct: 121 LNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
Query: 181 DDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
DDESRS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSR
Sbjct: 181 DDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSR 240
Query: 241 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
GVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM
Sbjct: 241 GVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
Query: 301 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
LFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV
Sbjct: 301 LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
Query: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
Query: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER
Sbjct: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
Query: 481 DVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAAL 540
DVGCKFEFANPP +EEVL+SSAEQVVVTLRGVHPESIE+F PTAQKLIDEQG GALAAAL
Sbjct: 481 DVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGALAAAL 540
Query: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGK 600
AQLSGF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADE+GK
Sbjct: 541 AQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADEIGK 600
Query: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDG 660
IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILK+TK LPPLQDDG
Sbjct: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITK------------LPPLQDDG 660
Query: 661 PPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
PPSDNYGRFS RER+SRNSSRDRRG +TSRGWGSSRDSDD+ D
Sbjct: 661 PPSDNYGRFSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGD 687
BLAST of Lsi06G000100.1 vs. NCBI nr
Match:
gi|1009116514|ref|XP_015874813.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Ziziphus jujuba])
HSP 1 Score: 1023.1 bits (2644), Expect = 2.5e-295
Identity = 550/733 (75.03%), Postives = 617/733 (84.17%), Query Frame = 1
Query: 1 MASLLGVTAIHHAPNLDMYRRMGTTATASPTPS---LSFADKSHLIALKALTCFSASNRR 60
MAS+LGV++I+ P+L++YRR + + PS L+ D+SH ++ L ++ SN
Sbjct: 1 MASILGVSSIYQTPSLELYRRTAASTSPQTNPSSSSLALPDRSHFNSV--LRAYNTSNST 60
Query: 61 NLS---------GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSS-LAFSA 120
S G +SSAIATPNS+LSEEAF+ L FSK SLDD+ + + S S
Sbjct: 61 TNSAKTASRHGLGLVSSAIATPNSVLSEEAFKGLGDFSKSSLDDSDGNEDYGSEDEPSSL 120
Query: 121 APPADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKT 180
A AD DELA+SKL LPQRL D+LQ RGITHLFPIQRAVLVPALEGRDLIARAKTGTGKT
Sbjct: 121 ADSADGDELALSKLSLPQRLVDSLQGRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKT 180
Query: 181 LAFGIPILKKLTEDDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVY 240
LAFGIPI+K+LTEDDE R SRRRS RLPRVLVL PTRELAKQVEKEIKESAP+L+TVCVY
Sbjct: 181 LAFGIPIIKRLTEDDEQRGSRRRSGRLPRVLVLAPTRELAKQVEKEIKESAPHLSTVCVY 240
Query: 241 GGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDV 300
GGVSY+TQQ+ALSRGVDVVVGTPGRIIDLINGNSLNLGEV+YLVLDEADQMLAVGFEEDV
Sbjct: 241 GGVSYITQQSALSRGVDVVVGTPGRIIDLINGNSLNLGEVQYLVLDEADQMLAVGFEEDV 300
Query: 301 EVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTT 360
EVILEKLPSQRQ+MLFSATMP WV+KL+RK+L NPLTIDLVG+Q+EKLAEGIKL+A+ TT
Sbjct: 301 EVILEKLPSQRQSMLFSATMPGWVRKLSRKHLNNPLTIDLVGEQEEKLAEGIKLYALSTT 360
Query: 361 ATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTL 420
ATSK+TIL DLVTVYAKGGKTIVFTQTKRDADEVSLAL+NSI SEALHGDISQHQRERTL
Sbjct: 361 ATSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSLALSNSIASEALHGDISQHQRERTL 420
Query: 421 NGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILM 480
NGFRQGKFTVLVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM
Sbjct: 421 NGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILM 480
Query: 481 FTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQK 540
FTNSQRRTVRSLERDVGCKFEF +PP+IEEVLESSA+QVV TL GVHPESI+FF PTAQ+
Sbjct: 481 FTNSQRRTVRSLERDVGCKFEFVSPPSIEEVLESSAQQVVATLSGVHPESIDFFTPTAQQ 540
Query: 541 LIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGF 600
LI+EQG ALAAALAQLSGFS PPSSRSLI+HEQGWVTLQ TRD ++SRG+LSARSVTGF
Sbjct: 541 LIEEQGTSALAAALAQLSGFSRPPSSRSLISHEQGWVTLQWTRDSAFSRGYLSARSVTGF 600
Query: 601 LSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCS 660
LSD+YS AADEVGKIH+IADER+ GAVFDLPEEIAKELL+++LP GNTI K+TK
Sbjct: 601 LSDVYSAAADEVGKIHIIADERVQGAVFDLPEEIAKELLDRQLPPGNTISKITK------ 660
Query: 661 ILRLLQLPPLQDDGPPSDNYGRFSSRERNS-RNSSRDRRGYRTSRGWGSSRDSDDDDD-- 711
LP LQDDGP +D YGRFS R+RNS R + R G+R+SRGW S R SD +D+
Sbjct: 661 ------LPALQDDGPANDFYGRFSGRDRNSRRGGQKSRGGFRSSRGWDSGRVSDGEDNFF 719
BLAST of Lsi06G000100.1 vs. NCBI nr
Match:
gi|703093451|ref|XP_010094933.1| (DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis])
HSP 1 Score: 1022.3 bits (2642), Expect = 4.2e-295
Identity = 550/708 (77.68%), Postives = 606/708 (85.59%), Query Frame = 1
Query: 1 MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIA-LKALTCFSASNRRNL 60
MAS++GV++I+ P+L+ YRR+ AT+SP+ SL F DKSH + L+A C S S+ R
Sbjct: 1 MASIIGVSSIYQTPSLEPYRRVAA-ATSSPS-SLPFPDKSHFNSVLRAYNCKSGSSSR-- 60
Query: 61 SGFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAIS 120
++SAIATPNS+LSEEAF+ L FSKDS + D + S DDDELAIS
Sbjct: 61 --LVASAIATPNSVLSEEAFKGLGDFSKDSFSGDEED-DYESEEGEPGEASVDDDELAIS 120
Query: 121 KLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180
KL LPQRL D+L+KRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI+K+LT
Sbjct: 121 KLGLPQRLVDSLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLT 180
Query: 181 EDDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNAL 240
EDDE R SRRRS RLP+ LVL PTRELAKQVEKEIKESAP+LNTVCVYGGVSY+TQQNAL
Sbjct: 181 EDDEQRGSRRRSSRLPKGLVLAPTRELAKQVEKEIKESAPHLNTVCVYGGVSYITQQNAL 240
Query: 241 SRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQ 300
SRGVDVVVGTPGR+IDLING SL LGEV+YLVLDEADQMLAVGFEEDVEVILEKLPS+RQ
Sbjct: 241 SRGVDVVVGTPGRLIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQ 300
Query: 301 NMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLV 360
+MLFSATMP+WVKKLARKYL+NPLTIDLVG++DEKLAEGIKL+AI TTATSK+TIL DLV
Sbjct: 301 SMLFSATMPSWVKKLARKYLDNPLTIDLVGERDEKLAEGIKLYAISTTATSKRTILSDLV 360
Query: 361 TVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLV 420
TVYAKGGKTIVFTQTKRDADEVS+AL NSI SEALHGDISQHQRERTLNGFRQGKFTVLV
Sbjct: 361 TVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLV 420
Query: 421 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSL 480
ATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT+SQRRTVRSL
Sbjct: 421 ATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSL 480
Query: 481 ERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAA 540
ERDVGCKFEF +PP+IEEVLESSAE VV TL GVH ES+EFF PTAQKLI+EQG ALAA
Sbjct: 481 ERDVGCKFEFVSPPSIEEVLESSAEHVVATLSGVHAESVEFFTPTAQKLIEEQGTSALAA 540
Query: 541 ALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEV 600
ALAQLSGF+ PPSSRSLINHEQG VTLQL RDP++SRGFLSARSVTGFLSD+YS AADE+
Sbjct: 541 ALAQLSGFARPPSSRSLINHEQGLVTLQLIRDPAFSRGFLSARSVTGFLSDVYSAAADEL 600
Query: 601 GKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQD 660
GK++L+ADER+ AVFDLPEEIAKELLN+ELP GNTI K+TK LPPLQD
Sbjct: 601 GKVYLVADERVQSAVFDLPEEIAKELLNRELPSGNTISKITK------------LPPLQD 660
Query: 661 DGPPSDNYGRFSSRE----RNSRNSSRDRRGYRTSRGWGSSRDSDDDD 703
DGP SD YGRFSSRE R SR SR R G+R SRG G D+DD
Sbjct: 661 DGPASDYYGRFSSREHGGDRGSRRGSRGRGGFRGSRGRGGGFSDDEDD 689
BLAST of Lsi06G000100.1 vs. NCBI nr
Match:
gi|225450401|ref|XP_002278318.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Vitis vinifera])
HSP 1 Score: 1014.6 bits (2622), Expect = 8.7e-293
Identity = 541/707 (76.52%), Postives = 606/707 (85.71%), Query Frame = 1
Query: 2 ASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKA---LTCFSASNRRN 61
+S++GV++++ L++ RR T++ + SL F+DK+HL KA AS RR+
Sbjct: 3 SSIIGVSSVYQTTALELSRR-----TSAHSLSLPFSDKTHLGVFKAPNTRVLSDASLRRS 62
Query: 62 LS---GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDE 121
F+ SAIATPNS+LSEEAF+ L GFSKD LD D + + + SAA A +DE
Sbjct: 63 FKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAA--AQEDE 122
Query: 122 LAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIL 181
LA+++L LP RL ++L++RGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI+
Sbjct: 123 LALAQLGLPPRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPII 182
Query: 182 KKLTEDDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQ 241
K+L+EDDE R+S+RRS RLPRVLVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY+TQ
Sbjct: 183 KRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYITQ 242
Query: 242 QNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLP 301
QNALSRGVDVVVGTPGRIIDLI GNSL LGEV+ LVLDEADQMLAVGFEEDVEVILEKLP
Sbjct: 243 QNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVGFEEDVEVILEKLP 302
Query: 302 SQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTIL 361
S+RQ+MLFSATMP WVKKLARKYL+NPLTIDLVGD DEKLAEGIKL+AI TTATSK+TIL
Sbjct: 303 SERQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDHDEKLAEGIKLYAIPTTATSKRTIL 362
Query: 362 RDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKF 421
DL+TVYAKGGKTIVFTQTKRDADEVS+AL NSI SEALHGDISQHQRERTLNGFRQGKF
Sbjct: 363 SDLITVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKF 422
Query: 422 TVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRT 481
TVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEGTAILMFT+SQRRT
Sbjct: 423 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRT 482
Query: 482 VRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPG 541
V+SLERDVGCKFEF +PPAIEEVLESSAEQVV TL GVHPES+EFF PTAQKLI+E+G G
Sbjct: 483 VKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEFFTPTAQKLIEEKGTG 542
Query: 542 ALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPA 601
ALAAALA LSGFS PPS RSLI+HEQGWVTLQLTRD YSRGFLSARSVTGFLSD+Y A
Sbjct: 543 ALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSDVYPTA 602
Query: 602 ADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLP 661
ADE+GKI+L+ADER+ GAVFDLPEEIAKELLNK++P GNTI K+TK LP
Sbjct: 603 ADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKITK------------LP 662
Query: 662 PLQDDGPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDD 702
LQDDGP D YGRFS+R+R+SR SR+RRG R SRG GSS SDDD
Sbjct: 663 ALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDD 690
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RH3_ARATH | 8.5e-264 | 71.05 | DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana GN=... | [more] |
RH3_ORYSJ | 4.4e-260 | 70.80 | DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japo... | [more] |
RH53_ARATH | 3.8e-131 | 60.71 | DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana GN=RH53 PE=2 SV=1 | [more] |
RH53_ORYSJ | 1.9e-130 | 60.35 | DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0... | [more] |
RH9_ARATH | 3.0e-128 | 55.86 | DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana GN=RH9 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0M1E9_CUCSA | 0.0e+00 | 92.89 | Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560830 PE=4 SV=1 | [more] |
W9QXY0_9ROSA | 2.9e-295 | 77.68 | DEAD-box ATP-dependent RNA helicase 3 OS=Morus notabilis GN=L484_022683 PE=4 SV=... | [more] |
D7UAC9_VITVI | 6.1e-293 | 76.52 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00060 PE=4 SV=... | [more] |
M5W8A0_PRUPE | 1.8e-289 | 74.65 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001778mg PE=4 SV=1 | [more] |
B9RFT3_RICCO | 4.5e-288 | 74.75 | Dead box ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_143719... | [more] |