Lsi06G000910.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCCCACTTCAATTGTCATAGCTGTTTTAGTTGTTTCAGTTTGCCAGTTCCAAATACTTGCCCAAACTCCACTAAATCCAATCCCCACAGGAGGCAATGATCTCATCACCAAAGCCTGCAGCAGCACTCCTTATAATGAAATGTGCAAAGCAATCTTACAATCATCTCCCAACAGCAATGGAGCAGATCTCTATGGCCTAGCACAAATTGTAATGAACATTGCATCAGAGAATGTCAGCAACATATATGAAAGCCTAAACCAATTACAAAACGGAACATCAGTAGACAGTTTCATGGATCAGTGTTTGACAGATTGCTTGGAGAGCTATCAGGATGCCATTGATCAAATTGAAGATTCAGTCACAGCATTGGAATTCAAAGCCTATAACGATGTTAAGACATGGGTTGCAGCTGCCATGAGTGATGCAGCTACCTGTGACATGGGGTTCAAAGAAAAACCAGGCTATCAATCTCCAATTGCACAAATGACTGCAGTTTTTGGTCAAATTTGCAACATTATCTTGGCCCTTACTCAACAATTAAGTGAAGGGAAAAGTAATTAA ATGAAGCCCACTTCAATTGTCATAGCTGTTTTAGTTGTTTCAGTTTGCCAGTTCCAAATACTTGCCCAAACTCCACTAAATCCAATCCCCACAGGAGGCAATGATCTCATCACCAAAGCCTGCAGCAGCACTCCTTATAATGAAATGTGCAAAGCAATCTTACAATCATCTCCCAACAGCAATGGAGCAGATCTCTATGGCCTAGCACAAATTGTAATGAACATTGCATCAGAGAATGTCAGCAACATATATGAAAGCCTAAACCAATTACAAAACGGAACATCAGTAGACAGTTTCATGGATCAGTGTTTGACAGATTGCTTGGAGAGCTATCAGGATGCCATTGATCAAATTGAAGATTCAGTCACAGCATTGGAATTCAAAGCCTATAACGATGTTAAGACATGGGTTGCAGCTGCCATGAGTGATGCAGCTACCTGTGACATGGGGTTCAAAGAAAAACCAGGCTATCAATCTCCAATTGCACAAATGACTGCAGTTTTTGGTCAAATTTGCAACATTATCTTGGCCCTTACTCAACAATTAAGTGAAGGGAAAAGTAATTAA ATGAAGCCCACTTCAATTGTCATAGCTGTTTTAGTTGTTTCAGTTTGCCAGTTCCAAATACTTGCCCAAACTCCACTAAATCCAATCCCCACAGGAGGCAATGATCTCATCACCAAAGCCTGCAGCAGCACTCCTTATAATGAAATGTGCAAAGCAATCTTACAATCATCTCCCAACAGCAATGGAGCAGATCTCTATGGCCTAGCACAAATTGTAATGAACATTGCATCAGAGAATGTCAGCAACATATATGAAAGCCTAAACCAATTACAAAACGGAACATCAGTAGACAGTTTCATGGATCAGTGTTTGACAGATTGCTTGGAGAGCTATCAGGATGCCATTGATCAAATTGAAGATTCAGTCACAGCATTGGAATTCAAAGCCTATAACGATGTTAAGACATGGGTTGCAGCTGCCATGAGTGATGCAGCTACCTGTGACATGGGGTTCAAAGAAAAACCAGGCTATCAATCTCCAATTGCACAAATGACTGCAGTTTTTGGTCAAATTTGCAACATTATCTTGGCCCTTACTCAACAATTAAGTGAAGGGAAAAGTAATTAA MKPTSIVIAVLVVSVCQFQILAQTPLNPIPTGGNDLITKACSSTPYNEMCKAILQSSPNSNGADLYGLAQIVMNIASENVSNIYESLNQLQNGTSVDSFMDQCLTDCLESYQDAIDQIEDSVTALEFKAYNDVKTWVAAAMSDAATCDMGFKEKPGYQSPIAQMTAVFGQICNIILALTQQLSEGKSN
BLAST of Lsi06G000910.1 vs. Swiss-Prot
Match: PLA1_PLAAC (Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 9.2e-13 Identity = 43/135 (31.85%), Postives = 73/135 (54.07%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TrEMBL
Match: A0A0A0M1H8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569235 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 4.3e-78 Identity = 146/188 (77.66%), Postives = 168/188 (89.36%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TrEMBL
Match: A0A067JHV8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23290 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.4e-31 Identity = 71/167 (42.51%), Postives = 111/167 (66.47%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TrEMBL
Match: B9RFD8_RICCO (Pectinesterase inhibitor, putative OS=Ricinus communis GN=RCOM_1433910 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.4e-30 Identity = 72/170 (42.35%), Postives = 105/170 (61.76%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TrEMBL
Match: V4SGD2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002648mg PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.2e-29 Identity = 74/173 (42.77%), Postives = 106/173 (61.27%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TrEMBL
Match: A0A061GLX6_THECC (Plant invertase/pectin methylesterase inhibitor superfamily protein, putative OS=Theobroma cacao GN=TCM_037447 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.2e-24 Identity = 60/152 (39.47%), Postives = 92/152 (60.53%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TAIR10
Match: AT1G55770.1 (AT1G55770.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 4.8e-12 Identity = 38/150 (25.33%), Postives = 75/150 (50.00%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TAIR10
Match: AT3G47670.1 (AT3G47670.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 67.8 bits (164), Expect = 8.2e-12 Identity = 56/196 (28.57%), Postives = 93/196 (47.45%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TAIR10
Match: AT1G70720.1 (AT1G70720.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11 Identity = 53/166 (31.93%), Postives = 86/166 (51.81%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TAIR10
Match: AT5G46940.1 (AT5G46940.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10 Identity = 45/148 (30.41%), Postives = 77/148 (52.03%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. TAIR10
Match: AT4G02250.1 (AT4G02250.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 62.0 bits (149), Expect = 4.5e-10 Identity = 36/134 (26.87%), Postives = 66/134 (49.25%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. NCBI nr
Match: gi|778662393|ref|XP_011659828.1| (PREDICTED: putative invertase inhibitor [Cucumis sativus]) HSP 1 Score: 298.9 bits (764), Expect = 6.2e-78 Identity = 146/188 (77.66%), Postives = 168/188 (89.36%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. NCBI nr
Match: gi|659099449|ref|XP_008450606.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 255.8 bits (652), Expect = 6.0e-65 Identity = 127/153 (83.01%), Postives = 138/153 (90.20%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. NCBI nr
Match: gi|359479985|ref|XP_003632383.1| (PREDICTED: pectinesterase inhibitor [Vitis vinifera]) HSP 1 Score: 149.4 bits (376), Expect = 6.1e-33 Identity = 68/152 (44.74%), Postives = 102/152 (67.11%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. NCBI nr
Match: gi|359487508|ref|XP_003633605.1| (PREDICTED: pectinesterase inhibitor-like [Vitis vinifera]) HSP 1 Score: 145.6 bits (366), Expect = 8.8e-32 Identity = 77/190 (40.53%), Postives = 115/190 (60.53%), Query Frame = 1
BLAST of Lsi06G000910.1 vs. NCBI nr
Match: gi|802760305|ref|XP_012089442.1| (PREDICTED: putative invertase inhibitor [Jatropha curcas]) HSP 1 Score: 144.4 bits (363), Expect = 2.0e-31 Identity = 71/167 (42.51%), Postives = 111/167 (66.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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