Lsi11G015610.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi11G015610.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_91
Location	chr11 : 23919924 .. 23920646 (+)
Sequence length	723

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTACCTCGTCCCCGCTACTACACCGACGTCAAGCTCAACGATGAGCGTGTTGATCCACCGACGCCGGTCCTTGATCCACTCCTCTCATGGGCGAACGAGGCTCATTGGTCAATGGGTGGCCTCAGCTTCAATCGCCTCAGGCTTCAAGGTCGAATCGAAGGCAATGTCCACAAGCTTCGAGTCGAGCGCGAGAAGGTGGCCAAGAAGAAGCTTAAAGCCAAGAAACTGGACTCTGCGCCAAAGAGATCTGAATCAGATACTGGAGCTGATGCCGATCGCCAATTCAATAAGGTGAGATCTGTATCTCCACCGCCGGCACCAATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGATGATGTTGGCGTGGATAAAGTAGAGACTAGGGTTGTGAAGAGGAGGTTGGTGAAGAAGTTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGAGGAATCAATTGAAGGGTTTGAAGGATAGAAGCTCGGAGATCAATGGGGTTGATGAATCTGTAATGAAGATCGTTGAAGAGATTAATGATGAAAATACTAAAGGGAAAAAGATGAACAGTGAAAGAAAGGGGAAGAATGGTGGAAAACTGGAGTCTGGTTCTGTTTCTTCTACAAGAACTTCTCCTAGATTGGCTAATAAGCGTGGATTAAATTGA

mRNA sequence

ATGGTTGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTACCTCGTCCCCGCTACTACACCGACGTCAAGCTCAACGATGAGCGTGTTGATCCACCGACGCCGGTCCTTGATCCACTCCTCTCATGGGCGAACGAGGCTCATTGGTCAATGGGTGGCCTCAGCTTCAATCGCCTCAGGCTTCAAGGTCGAATCGAAGGCAATGTCCACAAGCTTCGAGTCGAGCGCGAGAAGGTGGCCAAGAAGAAGCTTAAAGCCAAGAAACTGGACTCTGCGCCAAAGAGATCTGAATCAGATACTGGAGCTGATGCCGATCGCCAATTCAATAAGGTGAGATCTGTATCTCCACCGCCGGCACCAATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGATGATGTTGGCGTGGATAAAGTAGAGACTAGGGTTGTGAAGAGGAGGTTGGTGAAGAAGTTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGAGGAATCAATTGAAGGGTTTGAAGGATAGAAGCTCGGAGATCAATGGGGTTGATGAATCTGTAATGAAGATCGTTGAAGAGATTAATGATGAAAATACTAAAGGGAAAAAGATGAACAGTGAAAGAAAGGGGAAGAATGGTGGAAAACTGGAGTCTGGTTCTGTTTCTTCTACAAGAACTTCTCCTAGATTGGCTAATAAGCGTGGATTAAATTGA

Coding sequence (CDS)

ATGGTTGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTACCTCGTCCCCGCTACTACACCGACGTCAAGCTCAACGATGAGCGTGTTGATCCACCGACGCCGGTCCTTGATCCACTCCTCTCATGGGCGAACGAGGCTCATTGGTCAATGGGTGGCCTCAGCTTCAATCGCCTCAGGCTTCAAGGTCGAATCGAAGGCAATGTCCACAAGCTTCGAGTCGAGCGCGAGAAGGTGGCCAAGAAGAAGCTTAAAGCCAAGAAACTGGACTCTGCGCCAAAGAGATCTGAATCAGATACTGGAGCTGATGCCGATCGCCAATTCAATAAGGTGAGATCTGTATCTCCACCGCCGGCACCAATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGATGATGTTGGCGTGGATAAAGTAGAGACTAGGGTTGTGAAGAGGAGGTTGGTGAAGAAGTTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGAGGAATCAATTGAAGGGTTTGAAGGATAGAAGCTCGGAGATCAATGGGGTTGATGAATCTGTAATGAAGATCGTTGAAGAGATTAATGATGAAAATACTAAAGGGAAAAAGATGAACAGTGAAAGAAAGGGGAAGAATGGTGGAAAACTGGAGTCTGGTTCTGTTTCTTCTACAAGAACTTCTCCTAGATTGGCTAATAAGCGTGGATTAAATTGA

Protein sequence

MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPAPIATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRSSEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKRGLN

Homology

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BLAST of Lsi11G015610.1 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.4e-108
Identity = 208/240 (86.67%), Postives = 221/240 (92.08%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNVHKLR EREKVAKKKLKA+KLDSAPKRS+ D GADA RQ  K RSV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180
           PIATKRRRLMVLFEDEDD+G++K E  VVKRRLVKKLGDDFDRVAAESKR+QLKGLKDRS
Sbjct: 121 PIATKRRRLMVLFEDEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDRS 180

Query: 181 SEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKRGLN 240
           SEINGV+ESVMKIVEEIN+ENTK KK N ERKGK GG +ES SVS +R+SPRLANKR LN
Sbjct: 181 SEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRALN 240

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BLAST of Lsi11G015610.1 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.0e-55
Identity = 143/253 (56.52%), Postives = 169/253 (66.80%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           M+V LGPGKFYG+SLPRPR+YTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           R QGRIEG+V KLR EREK+ +K+ K  K  +    + SD    ++R+       SPPPA
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDL-VGSERKMVDSDEDSPPPA 120

Query: 121 PIATKRRRLMVLF-EDEDDVGVDKVE------TRVVKRRLVKKLGDDFDRVAAESK---R 180
           PIATKRRR M L  EDE+D   ++ E       RV +RRLVKKLGDDFDRVA E++   R
Sbjct: 121 PIATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKLGDDFDRVAPENEKADR 180

Query: 181 NQLKGL------KDRSSEINGVDESVMKIVEEINDENTKGKK-MNSERKGKNGGKLESGS 237
           +  K L      + R  E N   E+VM +VEE+N  N+ GKK   S  KGK  G  ES  
Sbjct: 181 SPSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNSMGKKSKGSGNKGKAAGGSES-P 240

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BLAST of Lsi11G015610.1 vs. TrEMBL
Match: B9RVZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53
Identity = 125/238 (52.52%), Postives = 163/238 (68.49%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTDVK N +RVDPP PV DP LSWA EAHWSMGG SF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDVKFNSDRVDPPVPVTDPFLSWAQEAHWSMGGHSFQRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEG+V+KLR  REK A  KL+A+   ++ K++++           +V S SPPPA
Sbjct: 61  RLQGRIEGSVNKLRKFREKEA--KLQARNSPASNKKNDNG---------KRVGSASPPPA 120

Query: 121 PIATKRRRLMVLFEDE-DDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDR 180
           P   KRRR M L ++E ++   +++  +V K++ V+KL  DF++VA ES  N+ K     
Sbjct: 121 PKVIKRRRFMDLMDEESEEEEEEEIVEKVKKKKSVRKLVGDFEKVATESVENKGKA---- 180

Query: 181 SSEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKR 238
                G+D++VMK+VEE+N EN+ GKK+   +KGK+  +  S  V+  RTSPRLA +R
Sbjct: 181 ---SGGIDDAVMKVVEEVNRENSVGKKLRRGKKGKSNKENGSSPVNGVRTSPRLAKQR 220

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BLAST of Lsi11G015610.1 vs. TrEMBL
Match: A0A061EAW7_THECC (Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 8.1e-53
Identity = 132/251 (52.59%), Postives = 160/251 (63.75%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTD K N +RVDPP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDTKFNSDRVDPPLPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNV +L+ +REK+ K               +S   A   ++  +  SVSPPPA
Sbjct: 61  RLQGRIEGNVKRLKAQREKLVK---------------DSPDKAHIIKKNKRDASVSPPPA 120

Query: 121 PIATKRRRLMVLFED------EDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLK 180
           P+A KRRR + L +D      ED++  ++ E RV+++   +KLGDDF+RVA+    N + 
Sbjct: 121 PVAVKRRRFLDLNDDDESENEEDEMVEEREEKRVLRKGAARKLGDDFERVAS----NGVA 180

Query: 181 GLKDRSSEINGVDESVMKIVEEIN-------DENTKGKKMNSERKGKNGGKLESGSVSST 239
             K   S  +G+   VM IVEE+N       D+  K KK  S  KG   GK+E    S T
Sbjct: 181 VSKRERSFSDGIGVDVMNIVEEVNMESEFQGDKKKKKKKKKSIEKGLKNGKVE--GQSGT 229

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BLAST of Lsi11G015610.1 vs. TrEMBL
Match: A0A0D2SKK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G201200 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.4e-51
Identity = 127/249 (51.00%), Postives = 165/249 (66.27%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YT+ + N ERV+PP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTETRFNSERVNPPVPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNV +L+ +R+K    K      D  PK++ SD             S SPPPA
Sbjct: 61  RLQGRIEGNVQRLKAQRDKFLNNK------DPIPKKNNSDA------------SFSPPPA 120

Query: 121 PIATKRRRLMVLFE-------DEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQL 180
           P+A KR+R + L +       +++++ +++ E RV+++  V+KLGDDF+RVA +      
Sbjct: 121 PVAVKRKRFLDLNDEDVESENEDNEIVMNREEKRVLRKGAVRKLGDDFERVAKDKDSGVA 180

Query: 181 KGLKDRSSEINGVDESVMKIVEEINDENTKGKKMNSER--KG--KNGGKLESGSVSSTRT 239
            G K   S+  G+D  VMKIVEE+N E+ + KK   +R  KG  K   ++ SG+ ++TR 
Sbjct: 181 SGGKRGFSDGIGID--VMKIVEEVNVESEEIKKKKKKRIVKGLKKGTDEVRSGTGTTTRA 228

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BLAST of Lsi11G015610.1 vs. TAIR10
Match: AT4G28310.1 (AT4G28310.1 unknown protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 101/234 (43.16%), Postives = 130/234 (55.56%), Query Frame = 1


Query: 3   VPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRL 62
           + + P  FYG+ LPRPR++ + K ND RVDPP  VLDPLLSWA +AHWSMGGL+F RLRL
Sbjct: 9   IAIRPVSFYGNGLPRPRFFDNPKFNDYRVDPPLSVLDPLLSWARDAHWSMGGLNFTRLRL 68

Query: 63  QGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPAPI 122
           QGRIEGNV+KLR + EK    KL                  ++ R+  +  S SPP API
Sbjct: 69  QGRIEGNVNKLRAQLEKSTPVKL------------------ESGRKKKRSGSESPPSAPI 128

Query: 123 ATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRSSE 182
             KRRR + L  D DD  V   +  VV  R+ +KL DDFDRVA ESK             
Sbjct: 129 VVKRRRYLDL-NDSDDEEVGSEDEGVV--RIRRKLSDDFDRVAEESK------------- 188

Query: 183 INGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANK 237
                    K+V E N ++ K + +  +R  +    ++    SSTR+SPRLA +
Sbjct: 189 --------TKLV-EANKKSIKSEFVEKKRLIEKKKIVKVNKTSSTRSSPRLAKR 199

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BLAST of Lsi11G015610.1 vs. TAIR10
Match: AT1G52270.1 (AT1G52270.1 unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 7.8e-07
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 1


Query: 7  PGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWA 46
          P  FY + LPRPR++ + + N  RVD P  VLDPLLSWA
Sbjct: 13 PVAFYRNGLPRPRFFDNHRFNSYRVDTPLSVLDPLLSWA 51

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BLAST of Lsi11G015610.1 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 8.7e-109
Identity = 210/237 (88.61%), Postives = 221/237 (93.25%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNVHKLRVEREKVAKKKLKA+KLDSAPKRS+ D GADA RQ  K RSV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180
           P+ATKRRRLMVLFEDEDDVG+DK E  VVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS
Sbjct: 121 PVATKRRRLMVLFEDEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180

Query: 181 SEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKR 238
           SEIN V+ESVMKIVEEIN+ENTK K++N E+KGK  GK+ES SVS TRTSPRLANKR
Sbjct: 181 SEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVGKVESVSVSGTRTSPRLANKR 237

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BLAST of Lsi11G015610.1 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.9e-108
Identity = 208/240 (86.67%), Postives = 221/240 (92.08%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNVHKLR EREKVAKKKLKA+KLDSAPKRS+ D GADA RQ  K RSV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180
           PIATKRRRLMVLFEDEDD+G++K E  VVKRRLVKKLGDDFDRVAAESKR+QLKGLKDRS
Sbjct: 121 PIATKRRRLMVLFEDEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDRS 180

Query: 181 SEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKRGLN 240
           SEINGV+ESVMKIVEEIN+ENTK KK N ERKGK GG +ES SVS +R+SPRLANKR LN
Sbjct: 181 SEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRALN 240

[Close]

BLAST of Lsi11G015610.1 vs. NCBI nr
Match: gi|1009129728|ref|XP_015881923.1| (PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba])

HSP 1 Score: 229.2 bits (583), Expect = 7.7e-57
Identity = 146/265 (55.09%), Postives = 174/265 (65.66%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTDVKLNDERVDPP PVLDP LSWA+EAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVPVLDPFLSWASEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEG V KL+ EREK AK+     K+ +        + +D+ R      S+SPP A
Sbjct: 61  RLQGRIEGCVKKLQAEREKFAKR----SKIVAGSSIGSGSSMSDSKRAV----SISPPAA 120

Query: 121 PIATKRRRLMVLF-EDEDDVGVDKVE----------TRVVKRRLVKKLGDDFDRVAAESK 180
           P+ATKRRRLM L  ED+DD   D+ E          +R VKRRLVK+L DDFDRVA+E++
Sbjct: 121 PMATKRRRLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLWDDFDRVASEAE 180

Query: 181 RNQ---LKGLKD------------RSSEINGVDESVMKIVEEINDENTKGKKM-NSERKG 239
           R +   LKGL              ++ E + V E+VMK+VEE+     KGK++     KG
Sbjct: 181 RGKGSPLKGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEVKMSTHKGKRVKGGGSKG 240

[Close]

BLAST of Lsi11G015610.1 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba])

HSP 1 Score: 229.2 bits (583), Expect = 7.7e-57
Identity = 145/265 (54.72%), Postives = 175/265 (66.04%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTDVKLNDERVDPP PVLDP LSWA+EAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVPVLDPFLSWASEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEG+V KL+ EREK AK+     K+ +        + +D+ R      S+SPP A
Sbjct: 61  RLQGRIEGSVKKLQAEREKFAKR----SKIVTGSSIGSGSSMSDSKRAV----SISPPAA 120

Query: 121 PIATKRRRLMVLF-EDEDDVGVDKVE----------TRVVKRRLVKKLGDDFDRVAAESK 180
           P+ATKRRRLM L  ED+DD   D+ E          +R VKRRLVK+L DDFDRVA+E++
Sbjct: 121 PMATKRRRLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLWDDFDRVASEAE 180

Query: 181 RNQ---LKGLKD------------RSSEINGVDESVMKIVEEINDENTKGKKM-NSERKG 239
           R +   LKGL              ++ E + V E+VMK+VEE+     KGK++     KG
Sbjct: 181 RGKGSPLKGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEVKMSTHKGKRVKGGGSKG 240

[Close]

BLAST of Lsi11G015610.1 vs. NCBI nr
Match: gi|703073457|ref|XP_010089552.1| (hypothetical protein L484_004788 [Morus notabilis])

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-55
Identity = 143/253 (56.52%), Postives = 169/253 (66.80%), Query Frame = 1


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           M+V LGPGKFYG+SLPRPR+YTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           R QGRIEG+V KLR EREK+ +K+ K  K  +    + SD    ++R+       SPPPA
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDL-VGSERKMVDSDEDSPPPA 120

Query: 121 PIATKRRRLMVLF-EDEDDVGVDKVE------TRVVKRRLVKKLGDDFDRVAAESK---R 180
           PIATKRRR M L  EDE+D   ++ E       RV +RRLVKKLGDDFDRVA E++   R
Sbjct: 121 PIATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKLGDDFDRVAPENEKADR 180

Query: 181 NQLKGL------KDRSSEINGVDESVMKIVEEINDENTKGKK-MNSERKGKNGGKLESGS 237
           +  K L      + R  E N   E+VM +VEE+N  N+ GKK   S  KGK  G  ES  
Sbjct: 181 SPSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNSMGKKSKGSGNKGKAAGGSES-P 240

The following BLAST results are available for this feature:

BLAST of Lsi11G015610.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi11G015610.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3S4_CUCSA	1.4e-108	86.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1	[more]
W9R4I2_9ROSA	1.0e-55	56.52	Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1	[more]
B9RVZ1_RICCO	1.6e-53	52.52	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1	[more]
A0A061EAW7_THECC	8.1e-53	52.59	Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4...	[more]
A0A0D2SKK6_GOSRA	3.4e-51	51.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G201200 PE=4 SV=1	[more]

BLAST of Lsi11G015610.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28310.1	1.2e-36	43.16	unknown protein	[more]
AT1G52270.1	7.8e-07	56.41	unknown protein	[more]

BLAST of Lsi11G015610.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110606\|ref\|XP_008455314.1\|	8.7e-109	88.61	PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo]	[more]
gi\|449438098\|ref\|XP_004136827.1\|	1.9e-108	86.67	PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus]	[more]
gi\|1009129728\|ref\|XP_015881923.1\|	7.7e-57	55.09	PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba]	[more]
gi\|1009165334\|ref\|XP_015900977.1\|	7.7e-57	54.72	PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba]	[more]
gi\|703073457\|ref\|XP_010089552.1\|	1.5e-55	56.52	hypothetical protein L484_004788 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi11G015610	Lsi11G015610	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi11G015610.1.CDS.1	Lsi11G015610.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi11G015610.1	Lsi11G015610.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35103	FAMILY NOT NAMED	coord: 1..212 score: 1.7
None	No IPR available	PANTHER	PTHR35103:SF1	SUBFAMILY NOT NAMED	coord: 1..212 score: 1.7