Lsi07G011230.1 (mRNA) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.TGCAACGAGAAATTAAGTAATGCTTTGTTCTTGGTGGGTGAGATCGGTGGCAATGACTATAACTATGCACTATTCCAAGGGAAAACTATTCAAGAGGCAAAAAACATGGTGCCAGATGTTGTTCGAACCATAAAGAATGCTGTTGAGGTAAATTTTTGTCTAGAATAGATCGATCATATTATAATTCCATATTTTCTTTTTGTTACTCATGTGAATGGGAGGTTTATTGACTTACTTTTTTTCTTGTAATGTTTGTAGAAAGTAATAAGCTACGGTGCTACTCGAGTTATTGTTCCTGGAAACTTTCCAATTGGATGTTTTCCCATCTACCTCACTGGATTCCAAACCAATGATACATCTGCTTATGATGAACTTCACTGTTTAAAGGATTTGAACAATTTAGCAAGCTATCACAATGATCACATCAAGCAAGCCATTGAAGTACTCAAGAAAGAGAATCCACATACCATTATCGTATATGGTGACTATTACAATGCATTTCTATGGATTCTTCGTCATGCTTTCGTTCTAGGTATTTTTTTTCCCTACTCTTATATTCATTTTCTTAAGGGTTGTTTTCAAATATAGAAAAATGAACCAAAATATTTATAAATATAGCAAAATTTCACTATCTATCTACAATAGACCGTGATAGACTACTATCTGTGTCTATCTATAGTCTATCACATATAAAAGGCGAAATTTTGCTATATTTGTAAATATTATCAACAGTTTTGTCATTTAAAATAATTTCTCTTTTCTTAACTTACAAAAGATTAAAATATTTCTCAAACTTATAATGCTTCTACCTAAACTCTTATATATGGACAGGATTTGATGAAGCTTCTTTGCAAAAATCATGTTGTGGGATTGGAGGAGATTACAATTTTAACCTCATGCAAATGTGTGGACTTCCCGGAGTATCTGTTTGCTCAAACTTTAAGGAACATATTAGTTGGGATGGAGTCCATTTGA TGCAACGAGAAATTAAGTAATGCTTTGTTCTTGGTGGGTGAGATCGGTGGCAATGACTATAACTATGCACTATTCCAAGGGAAAACTATTCAAGAGGCAAAAAACATGGTGCCAGATGTTGTTCGAACCATAAAGAATGCTGTTGAGAAAGTAATAAGCTACGGTGCTACTCGAGTTATTGTTCCTGGAAACTTTCCAATTGGATGTTTTCCCATCTACCTCACTGGATTCCAAACCAATGATACATCTGCTTATGATGAACTTCACTGTTTAAAGGATTTGAACAATTTAGCAAGCTATCACAATGATCACATCAAGCAAGCCATTGAAGATTTGATGAAGCTTCTTTGCAAAAATCATGTTGTGGGATTGGAGGAGATTACAATTTTAACCTCATGCAAATGTGTGGACTTCCCGGAGTATCTGTTTGCTCAAACTTTAAGGAACATATTAGTTGGGATGGAGTCCATTTGA TGCAACGAGAAATTAAGTAATGCTTTGTTCTTGGTGGGTGAGATCGGTGGCAATGACTATAACTATGCACTATTCCAAGGGAAAACTATTCAAGAGGCAAAAAACATGGTGCCAGATGTTGTTCGAACCATAAAGAATGCTGTTGAGAAAGTAATAAGCTACGGTGCTACTCGAGTTATTGTTCCTGGAAACTTTCCAATTGGATGTTTTCCCATCTACCTCACTGGATTCCAAACCAATGATACATCTGCTTATGATGAACTTCACTGTTTAAAGGATTTGAACAATTTAGCAAGCTATCACAATGATCACATCAAGCAAGCCATTGAAGATTTGATGAAGCTTCTTTGCAAAAATCATGTTGTGGGATTGGAGGAGATTACAATTTTAACCTCATGCAAATGTGTGGACTTCCCGGAGTATCTGTTTGCTCAAACTTTAAGGAACATATTAGTTGGGATGGAGTCCATTTGA CNEKLSNALFLVGEIGGNDYNYALFQGKTIQEAKNMVPDVVRTIKNAVEKVISYGATRVIVPGNFPIGCFPIYLTGFQTNDTSAYDELHCLKDLNNLASYHNDHIKQAIEDLMKLLCKNHVVGLEEITILTSCKCVDFPEYLFAQTLRNILVGMESI
BLAST of Lsi07G011230.1 vs. Swiss-Prot
Match: GDL74_ARATH (GDSL esterase/lipase At5g03980 OS=Arabidopsis thaliana GN=At5g03980 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 4.5e-29 Identity = 59/110 (53.64%), Postives = 75/110 (68.18%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. Swiss-Prot
Match: GDL6_ARATH (GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 5.1e-25 Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. Swiss-Prot
Match: GDL91_ARATH (GDSL esterase/lipase At1g28640 OS=Arabidopsis thaliana GN=At1g28640 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. Swiss-Prot
Match: GDL8_ARATH (GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana GN=At1g28590 PE=2 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 5.6e-24 Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. Swiss-Prot
Match: GDL7_ARATH (GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana GN=At1g28580 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23 Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TrEMBL
Match: U5G9P4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s02420g PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42 Identity = 82/114 (71.93%), Postives = 97/114 (85.09%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TrEMBL
Match: B9SQX6_RICCO (Alpha-L-fucosidase 2, putative OS=Ricinus communis GN=RCOM_1405430 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 3.5e-41 Identity = 79/109 (72.48%), Postives = 96/109 (88.07%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TrEMBL
Match: A0A061FGU1_THECC (SGNH hydrolase-type esterase superfamily protein, putative OS=Theobroma cacao GN=TCM_034863 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.5e-39 Identity = 76/114 (66.67%), Postives = 95/114 (83.33%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TrEMBL
Match: A0A061F1T9_THECC (SGNH hydrolase-type esterase superfamily protein, putative OS=Theobroma cacao GN=TCM_025945 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 5.7e-39 Identity = 76/114 (66.67%), Postives = 96/114 (84.21%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TrEMBL
Match: A0A067JHP2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23299 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 7.4e-39 Identity = 76/114 (66.67%), Postives = 92/114 (80.70%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TAIR10
Match: AT5G03980.1 (AT5G03980.1 SGNH hydrolase-type esterase superfamily protein) HSP 1 Score: 129.0 bits (323), Expect = 2.5e-30 Identity = 59/110 (53.64%), Postives = 75/110 (68.18%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TAIR10
Match: AT1G28570.1 (AT1G28570.1 SGNH hydrolase-type esterase superfamily protein) HSP 1 Score: 115.5 bits (288), Expect = 2.9e-26 Identity = 53/116 (45.69%), Postives = 76/116 (65.52%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TAIR10
Match: AT1G28640.1 (AT1G28640.1 GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 112.8 bits (281), Expect = 1.9e-25 Identity = 52/116 (44.83%), Postives = 73/116 (62.93%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TAIR10
Match: AT1G28590.1 (AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 112.1 bits (279), Expect = 3.2e-25 Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. TAIR10
Match: AT1G28580.1 (AT1G28580.1 GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 110.9 bits (276), Expect = 7.1e-25 Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. NCBI nr
Match: gi|778730277|ref|XP_011659746.1| (PREDICTED: acetylajmalan esterase-like [Cucumis sativus]) HSP 1 Score: 213.0 bits (541), Expect = 3.8e-52 Identity = 101/114 (88.60%), Postives = 108/114 (94.74%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. NCBI nr
Match: gi|659134068|ref|XP_008467015.1| (PREDICTED: GDSL esterase/lipase At5g03980-like, partial [Cucumis melo]) HSP 1 Score: 209.5 bits (532), Expect = 4.1e-51 Identity = 99/114 (86.84%), Postives = 107/114 (93.86%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. NCBI nr
Match: gi|659096618|ref|XP_008449193.1| (PREDICTED: GDSL esterase/lipase At5g03980-like [Cucumis melo]) HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50 Identity = 98/114 (85.96%), Postives = 107/114 (93.86%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. NCBI nr
Match: gi|659131079|ref|XP_008465497.1| (PREDICTED: acetylajmalan esterase-like, partial [Cucumis melo]) HSP 1 Score: 194.1 bits (492), Expect = 1.8e-46 Identity = 92/114 (80.70%), Postives = 100/114 (87.72%), Query Frame = 1
BLAST of Lsi07G011230.1 vs. NCBI nr
Match: gi|743883215|ref|XP_011036970.1| (PREDICTED: acetylajmalan esterase-like [Populus euphratica]) HSP 1 Score: 182.2 bits (461), Expect = 7.1e-43 Identity = 83/114 (72.81%), Postives = 96/114 (84.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
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