Lsi07G003320.1 (mRNA) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G003320.1
Type	mRNA
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DNA mismatch repair MUTS family protein
Location	chr07 : 3513029 .. 3516735 (+)
Sequence length	947

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGTTTTGGTTGCTTGACTTTTTAAACTTCATAATAGAAACCTTGTTGTTTAAAAAATAATAAAACTAATAAATCAAAGTATTCTTTTGAATATACATGATGCTTTAACAATTATTTCCTTTTCTTGCTCAAAGATCTTTTATTCATGGTTATGAAGTTTTTCTCCACAGCAACGAGGTCTTTGAAAACGCATGTATGGAATTTGATGAGGTGAACCTAAAGCCAACTTACAAGATTGTCTGGGGAGTACCAGGTTCTCACTATTGAAATATGATTAACCATTTAATCCCCTCACATTTTATATATTCTCCCCCTCCCTTTTTTTAAAACTTTTATTCTTCCATTTTGGATAAGAAAAACATTAGTTTTCATTTATTATTCAGTAATACCTTTGGGCATTTAGTATGCAAATATGAGAATGTGATGCCTAGGAATATGACGATTGTGTTTGGACATGGAAATAATATCTGTAAAACTTGATTTCGGATTTTATTTATTGTCTTTATAAAATCCAATCTTATTCAATATAAGTGAACTGATTGTATAAAATTCCCAAGGAATTCCTAGAATTCTTTTTATATGCTTGTTAAATTAAATCTATTAATAATGTTTTGTCTGATAAACCACTTCCAAATATATTTTAAACAAATTATTTTAACTTACAAAATGAATTCTTAAAATTATAGAAATTTAAAGTAATTAATTCTTGAAGTTAATTATGTTCGGTGGGTTTTGGATGTCAATGTCTAATTGTTGAGAAGAGGTCCTCTGAAGAACCTTTGCGCCCTAGCACAATGCCCTCCTTGACCATGAAGTCACATTTTTTCCAATTTAAAACAAGTTTGGCATCTTGGCACCTTTGCAAAATTAGAGATAGGTTAGCAAGACAAGAATAAAAAGATGATTAAAAAGAAAAAAAGAAAAAAAAAATCATCCATAAAAACCTCCATCACATCCTCTATAAGTCCCGGAAAGATGACCATCATGCAACGCTGGAAAGTTTATGATTGCACTAATTTAGTTTAGGATTACACTTATTTGAGGTGGGAAATTAGTCATTTAGTTTATGATTCTTCTCTCCTCTCTTTTAATAAGAAACTGGGCAGAAAAGAAATCAAAAGGCTGGAGCCAAAAAGACAACAAGAACCCAATGTCATCACTCAAATGATCATGACTTTTCCTTGTCATAGAAGACGCCCTGATCCTCTACCTCTCTACCCACACAAAAAAACTGCACATGAATTGAGCCATAGAATCCCATGCTTATTGAAGTTTTGACCAAAAAACATCTGAAAGACCATTGTCTGAAGGCGTCAAGAAATGTGAACCACGGGGAGGAGGCTGTAGGACAGGAAAAAAATAAGTGATTCACGTCCTTCAAGCATTTCCTGAACATAGGGCACCAGCTGAGGGCTAAGGCTCCACGAGAGGATTGCGACTCTATGTAAGGCCTCCAAGCACAACAGTCCAGATGAGAATCTTACACTTCTTAGGGACCCTAAATCTTCAAAGGATTTTGGGAAACTAGCTAGGAAAGCACAGGCTTGCCTTTGAAAAGGATGGTGAAGAGGATTTCACAGAAAATAACCAACGCTTTTCAAGGTTTCAAACTCCACCATCTACCAAATCCACTCAATAACTTCTCTGTCAGGAACATGTCTTCTAGGGCAAAAGAACATAAAGTATACAGTTCACGATCAATGTCTGTTCATGCACGTGAAAAATGATTTTTTAGTTTCAGTTGAGGTTCGTTCTTTTTAAGTAAACCAATTGCTTATAGATTCTATTATGGTTTTTCTCTCTGCAAACCTAAAGGAGTTGAAATTATGTTTGTAGGGCGTTCAAATGCTATTAATATAGCTGAAAGGTTAGGGTTGCCTAATTCTGTTGTAGATGATGCTCGGGAACTTTATGGTGCGGGAAGTGCACAGATAGATGAGGTAGAATGCACAATCATTGCAAATTTGTACCTTGCTTTTTATGTATGCCTTTTTATTTGTGAAGCATCATAAAAAGAATAGTTTATGGGATACTATCATAATCAATTATCTTGTTATAGTTTACCAATTCAATATGTTCTTATTTTATATTCAGTCTGTATTCTTTCTTTAATTTTAAAAAAACTGAAAGATGACTCACTTCTCCGGTTAGCAGTAGCAGTAGCAGTAGCAGATATGGAATATTAATTCCTTATGCACTTCGTATATTGCTTCTCAAGCATATGTTAAACTACATTATTTACAATTTTATGTTACATTTTATACAGGTCATAACCGATATGGAATGTATAAAGAAAAAGTATGGAGACCTCTTACAAGAAGCTCAAAATAACTTGACGTGAGTCTCTTAGTAAAAGTAATTTTATGGAAACAGTCTCAGTCCAACCTAGTTATCCTGTAATAATATCATAGCCATAGTTCTCATTCAAAACCTTCTGTGTTGATTAAGTTCTGATCATTTTTAATTCGTACAGTTGCTGAAATTGTGATCTTAATTTTTTTTAATCATGGCTATTATTATCCGCATAAAGCATTTTAAAAAGAAATTAAAAGAAAAGAAAACTGTAATTCTGACCCTTTTTAATGTGAAGGAGAAGATCTTTGGAGAAGGCGTTGAGCTTTTTTATGTGATATCCATATCCAGATAGATGATAGATCAAAGTTTCTTTAAAGTCATGTACATATTTAATAATTGTCTTCTCTTTAGAAAAACTATCAAGATACAAGTTTGTTTCTCGCCTATACATAAGTAATAAATATGGGTCTTTCCTCAAAATGCTAGCTTTATTTCATCTTTTCGTCATTTTAAATAGATGATGCTCTTGAACTTGTGCAATCGTGTTCTTTTAACCATTCATATTTTTGTAATCATAGGGAGTCAAAAAATCTTTATGAAAAGTTATTGCTTGCTAGAAGAAACATTACTGAACATGGCAGACGACAGAGGCTTAGAAAAGTGCAAGAGGTAACCAAGGCTGCAACAACGGCTCGTTCCAACCTTCACCAAAAAGTACGAGAACTACGTGCATCTACAATTGAGTATTCCCCGCCCTCTGCCATTGATAGTAGGCAACCTGCAGGAATAAACTCTAATAACCGAACTACAGCAGGCAAAAAGAATTTGATGGCATTGCATACGCATATATCTTCAACCAGTAACATCAGTCAACCACGATCAGGTTTGCCATTGACAAATCTCCTGTTTAATTTTATGTGTGTTTCGAAGAGTTGCAAATTTTCTTCCTAGTAGAAGCTCTGTTTTTTATAATTATGTTGTCGGTTTTTATGTGATGAAAAGAATTTTTGTTACCTTATCTTTGTGAGTTTTGTACATTACAGAGGAGCCCGAGTTTCCCACCGTTGGCGATACTGTGTACGTTTCTTCCTTTGGAAAAAAAGCGACAGTTTTAAGCGTAGAGCCATCAAAAGACGAAGTAATTGTTCGAGTTGGTAGCGTAAAGTTGAAGCTGAAGTTCACTGACATAATGAGATAATCATCTAGAAGTCATGCACATGTTGACGAGTATACGTTAATTTATAAAATTAACCAACTTAGTATCTCTGTTCTCTATGCTATTCATGTGCGATGCTGGTTTGTCCTGATGCACCCAATCCGAAAAATTAGAAAAATAGCCACAAAAAAACCTGAATTCGCTGAGTAAATGTTTTTTAAAACAAAATCAATTTTTTGTAAGCACGTTTG

mRNA sequence

ATGACAGTTTTTCTCCACAGCAACGAGGTCTTTGAAAACGCATGTATGGAATTTGATGAGGTGAACCTAAAGCCAACTTACAAGATTGTCTGGGGAGTACCAGGGCGTTCAAATGCTATTAATATAGCTGAAAGGTTAGGGTTGCCTAATTCTGTTGTAGATGATGCTCGGGAACTTTATGGTGCGGGAAGTGCACAGATAGATGAGGTCATAACCGATATGGAATGTATAAAGAAAAAGTATGGAGACCTCTTACAAGAAGCTCAAAATAACTTGACGGAGTCAAAAAATCTTTATGAAAAGTTATTGCTTGCTAGAAGAAACATTACTGAACATGGCAGACGACAGAGGCTTAGAAAAGTGCAAGAGGTAACCAAGGCTGCAACAACGGCTCGTTCCAACCTTCACCAAAAAGTACGAGAACTACGTGCATCTACAATTGAGTATTCCCCGCCCTCTGCCATTGATAGTAGGCAACCTGCAGGAATAAACTCTAATAACCGAACTACAGCAGGCAAAAAGAATTTGATGGCATTGCATACGCATATATCTTCAACCAGTAACATCAGTCAACCACGATCAGAGGAGCCCGAGTTTCCCACCGTTGGCGATACTGTGTACGTTTCTTCCTTTGGAAAAAAAGCGACAGTTTTAAGCGTAGAGCCATCAAAAGACGAAGTAATTGTTCGAGTTGGTAGCGTAAAGTTGAAGCTGAAGTTCACTGACATAATGAGATAATCATCTAGAAGTCATGCACATGTTGACGAGTATACGTTAATTTATAAAATTAACCAACTTAGTATCTCTGTTCTCTATGCTATTCATGTGCGATGCTGGTTTGTCCTGATGCACCCAATCCGAAAAATTAGAAAAATAGCCACAAAAAAACCTGAATTCGCTGAGTAAATGTTTTTTAAAACAAAATCAATTTTTTGTAAGCACGTTTG

Coding sequence (CDS)

ATGACAGTTTTTCTCCACAGCAACGAGGTCTTTGAAAACGCATGTATGGAATTTGATGAGGTGAACCTAAAGCCAACTTACAAGATTGTCTGGGGAGTACCAGGGCGTTCAAATGCTATTAATATAGCTGAAAGGTTAGGGTTGCCTAATTCTGTTGTAGATGATGCTCGGGAACTTTATGGTGCGGGAAGTGCACAGATAGATGAGGTCATAACCGATATGGAATGTATAAAGAAAAAGTATGGAGACCTCTTACAAGAAGCTCAAAATAACTTGACGGAGTCAAAAAATCTTTATGAAAAGTTATTGCTTGCTAGAAGAAACATTACTGAACATGGCAGACGACAGAGGCTTAGAAAAGTGCAAGAGGTAACCAAGGCTGCAACAACGGCTCGTTCCAACCTTCACCAAAAAGTACGAGAACTACGTGCATCTACAATTGAGTATTCCCCGCCCTCTGCCATTGATAGTAGGCAACCTGCAGGAATAAACTCTAATAACCGAACTACAGCAGGCAAAAAGAATTTGATGGCATTGCATACGCATATATCTTCAACCAGTAACATCAGTCAACCACGATCAGAGGAGCCCGAGTTTCCCACCGTTGGCGATACTGTGTACGTTTCTTCCTTTGGAAAAAAAGCGACAGTTTTAAGCGTAGAGCCATCAAAAGACGAAGTAATTGTTCGAGTTGGTAGCGTAAAGTTGAAGCTGAAGTTCACTGACATAATGAGATAA

Protein sequence

MTVFLHSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSAQIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVTKAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISSTSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDIMR

Homology

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BLAST of Lsi07G003320.1 vs. Swiss-Prot
Match: MUTS2_SYNY3 (Endonuclease MutS2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.2e-22
Identity = 71/237 (29.96%), Postives = 119/237 (50.21%), Query Frame = 1


Query: 11  FENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSAQIDEV 70
           FENA +EFD+ +L PTY+++WG+PGRSNA+ IA+RLGLP ++V+ A++  G  S  I++V
Sbjct: 494 FENASVEFDDQSLSPTYRLLWGIPGRSNALAIAQRLGLPLAIVEQAKDKLGGFSEDINQV 553

Query: 71  ITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVTKAATT 130
           I  +E  +++       AQ  L E++  Y+++     ++    R  +  + QEV +A   
Sbjct: 554 IAGLESQRREQEQKAANAQKLLQETEIFYQQVSQKAASLQARERELKSYQDQEVQQAIAA 613

Query: 131 ARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISSTSNIS 190
           A+  + + +R+L     +   PSA  ++Q                     T I       
Sbjct: 614 AKEEIAKVIRQL-----QRGKPSAQKAQQA--------------------TEILGQIQAE 673

Query: 191 QPRSEEPE----FPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDI 244
           Q     P+     PTVG+ + + SFG+ A V  V  +   V V +G +K+ +   DI
Sbjct: 674 QKAKVAPKPIGYQPTVGERIRIPSFGQTAEVTQVNATAQTVNVTLGLMKMTVPMADI 705

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BLAST of Lsi07G003320.1 vs. Swiss-Prot
Match: MUTS2_LACSS (Endonuclease MutS2 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21
Identity = 77/231 (33.33%), Postives = 126/231 (54.55%), Query Frame = 1


Query: 13  NACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSAQIDEVIT 72
           NA MEFD   L+PTY+++ GVPGRSNA +I+ RLGLPNS+VD A++L    S  ++ +IT
Sbjct: 464 NASMEFDVATLQPTYRLLIGVPGRSNAFDISTRLGLPNSIVDQAKQLMNDESQDLNNMIT 523

Query: 73  DMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVTKAATTAR 132
           D+E  +K      Q  ++ LTE+ +L+++L  A +   E        +  E+TKA   A 
Sbjct: 524 DLENQRKAAETEYQALRHELTEATDLHQQLSTAYQQFFED-------RETEMTKAKEKAN 583

Query: 133 SNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISSTSNISQP 192
           + + +   E++A  +  +    +   Q A I  N    A K  L  LH   +   N    
Sbjct: 584 AIVEK--AEVKADKV-ITKLRDMQMNQGAQIKENQLIDA-KAELGQLHQETTLKKNKVLQ 643

Query: 193 RSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDI 244
           R++  +   VGD V V+S+G++ T++    SK+   V++G +K+K+   D+
Sbjct: 644 RAKRRQTLKVGDDVLVTSYGQRGTLIRQVDSKNWE-VQMGIIKMKIANDDL 682

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BLAST of Lsi07G003320.1 vs. Swiss-Prot
Match: MUTS2_THERP (Endonuclease MutS2 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.5e-20
Identity = 71/246 (28.86%), Postives = 119/246 (48.37%), Query Frame = 1


Query: 1   MTVFLHSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELY 60
           + VF       ENA +EFD V L PTY+++ G+PGRS+A+ +A RLGLP  V+  AREL 
Sbjct: 462 LKVFATGTPGLENASVEFDPVTLSPTYRLLVGLPGRSHALEVARRLGLPEDVIARARELL 521

Query: 61  GAGSAQIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRK 120
           G+G+ Q+D +I +M+   ++   L   A+ +  E+    E+L  A   +     R+R   
Sbjct: 522 GSGAPQLDRLIAEMQRRLEEAESLAAAAERSRREA----EQLRAAAERLLAEAERERREA 581

Query: 121 VQEVTKAATTARSNLHQKVREL-RASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMAL 180
            QEV +      +   +  R++ RA+     PP  +             T    + L  +
Sbjct: 582 RQEVLRELEAELARARELARKIERAARSPAYPPIEV-------------TQDSLRALEEV 641

Query: 181 HTHISSTSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLK 240
              + S+    Q R E      VGD V +++ G +  V+++ P  +EV VR+G  +++  
Sbjct: 642 KRRVQSSGR--QSRQERVPEIAVGDRVELTALGLEGDVVAIHPESEEVEVRIGQFRVRQP 688

Query: 241 FTDIMR 246
              + R
Sbjct: 702 QASVRR 688

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BLAST of Lsi07G003320.1 vs. Swiss-Prot
Match: MUTS2_ENTFA (Endonuclease MutS2 OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.5e-18
Identity = 65/231 (28.14%), Postives = 117/231 (50.65%), Query Frame = 1


Query: 13  NACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSAQIDEVIT 72
           NA MEFD   L PTY+++ GVPGRSNA  I++RLGL NS+++ A+++    S  ++E+I 
Sbjct: 464 NASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIMDGESQDLNEMIE 523

Query: 73  DMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVTKAATTAR 132
           D+E  +K       EA++ + ES  L+++L  A +   E   ++  +  +E  K    A 
Sbjct: 524 DLENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEEREKELQKARKEANKIIAEAE 583

Query: 133 SNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISSTSNISQP 192
            N    + ++R   +E        S Q  G+  +    A  +     H       N    
Sbjct: 584 ENAETIISDIRKMQLE--------SGQQGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLK 643

Query: 193 RSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDI 244
           +++E +    GD V V+++G++ T+L  +  K +  V++G +K+ +   D+
Sbjct: 644 KAKEQKKLKAGDEVIVNTYGQRGTLLK-DNGKGQWQVQLGILKMNVSEEDM 685

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BLAST of Lsi07G003320.1 vs. Swiss-Prot
Match: MUTS2_LACCB (Endonuclease MutS2 OS=Lactobacillus casei (strain BL23) GN=mutS2 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-17
Identity = 63/226 (27.88%), Postives = 117/226 (51.77%), Query Frame = 1


Query: 13  NACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSAQIDEVIT 72
           NA MEFD   L+PTY+++ GVPGRSNA +I+ RLGLP+ +V+ A+ +  + S +++ +I+
Sbjct: 463 NASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSMISSDSHELNNMIS 522

Query: 73  DMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVTKAATTAR 132
           D+E  +K      + A+  L ++++++++L  A +  T     Q  +   +       A+
Sbjct: 523 DLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTERDAQLQQAKDKANSLVDKAQ 582

Query: 133 SNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISSTSNISQP 192
           +   + +++LR   ++ + P  +           N+  A K  L  LH       N    
Sbjct: 583 TKADKIIKQLR--QMQLTNPGTV---------KENQLIAAKTALKQLHQDEPLQKNRILR 642

Query: 193 RSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKL 239
           R  E +   VGD V V+S+ +  T+L  +  K    V++G +K+K+
Sbjct: 643 REREKQALHVGDEVKVASYDQTGTLLE-QFDKKHWQVQLGILKMKV 676

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BLAST of Lsi07G003320.1 vs. TrEMBL
Match: A0A0A0KVZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G114240 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.7e-114
Identity = 218/240 (90.83%), Postives = 227/240 (94.58%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SNEVFENACMEFDEVNLKPTYKI+WG+PGRSNAINIAERLGLP+SVVDDARELYGAGSA
Sbjct: 48  YSNEVFENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGLPSSVVDDARELYGAGSA 107

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNI EHGRRQRLRKVQEV 
Sbjct: 108 QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNIIEHGRRQRLRKVQEVA 167

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISS 185
            AATTARSNLHQK RELRASTIEY+ PSAID  Q AGINSNNRTTAGKK+LMAL   ISS
Sbjct: 168 NAATTARSNLHQKGRELRASTIEYTSPSAIDRMQRAGINSNNRTTAGKKDLMALRRQISS 227

Query: 186 TSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDIMR 245
           TS+ISQP+SEEP FPTVGDTVYVSSFGKKATVL VEPSKDEVIVRVGS+KLKLKFTDIMR
Sbjct: 228 TSDISQPQSEEPLFPTVGDTVYVSSFGKKATVLGVEPSKDEVIVRVGSIKLKLKFTDIMR 287

[Close]

BLAST of Lsi07G003320.1 vs. TrEMBL
Match: A0A0D2UA50_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G263400 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-63
Identity = 133/241 (55.19%), Postives = 183/241 (75.93%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SN+ FENACMEFDE N KPTYKI+WGVPGRSNAINIAERLG+P+++VD+ARELYGA SA
Sbjct: 584 YSNDAFENACMEFDEENFKPTYKILWGVPGRSNAINIAERLGVPSTIVDNARELYGAASA 643

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           +IDEVI DME  K+K+ +L++E+++ LT S++L+EKLL++RR + + G +QR +K++E++
Sbjct: 644 EIDEVIMDMETYKQKFQELIKESRHYLTMSRDLHEKLLVSRRKLQDLGAQQRYKKMRELS 703

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISS 185
           +AA  ARS LH+KVR+LR ST++ S  S    R+ A  N+    TA +  L   +   SS
Sbjct: 704 EAAAVARSTLHKKVRQLRTSTMKQSQLSKASKRKLA--NNYKHATAVENELQGTNMSSSS 763

Query: 186 TSNISQPRSEE-PEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDIM 245
              I QP+SE+  E P VGDTV+VSS  K+ATVL V+ SK+E++V+ G +KLKLK TD+ 
Sbjct: 764 IQVIKQPQSEKITELPKVGDTVHVSSLDKRATVLKVDTSKEEIVVQAGIMKLKLKATDVQ 822

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BLAST of Lsi07G003320.1 vs. TrEMBL
Match: F6H7A2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00680 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 127/238 (53.36%), Postives = 164/238 (68.91%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SN+ FENACMEFDEVNLKPTYKI+WG+PGRSNAINIAERLG+P  V+D ARE YGA SA
Sbjct: 579 YSNDAFENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGVPKKVLDKAREQYGAASA 638

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           +I+EVI DME  K+++ + + +A+  L  S++LYE LL+ +R + EHG  QR  K++EV+
Sbjct: 639 EINEVIIDMERFKQEFQERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVS 698

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISS 185
           +AA  ARS LH+KVR+LR+S    S P+A D  Q A   SN  T A              
Sbjct: 699 EAAAVARSLLHKKVRQLRSSATRPSQPTAADKSQHASATSNQHTAADINERPTTSESKHP 758

Query: 186 TSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDI 244
                Q  SE+   P VGD V+VSS GKKATVL VE SK +++V+ G++KLKLK TD+
Sbjct: 759 AKVAQQSSSEKKRVPKVGDMVHVSSLGKKATVLEVESSKGQLVVQAGNMKLKLKLTDV 816

[Close]

BLAST of Lsi07G003320.1 vs. TrEMBL
Match: M5XS10_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001618mg PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 133/238 (55.88%), Postives = 172/238 (72.27%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SN  FENACMEFD+V LKPTY+I+WGVPGRSNAINIAERLGLP  VVD+ARELYGA SA
Sbjct: 559 YSNNAFENACMEFDDVKLKPTYRILWGVPGRSNAINIAERLGLPGKVVDNARELYGAASA 618

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
            IDEVI DME +K+ +  LL E Q++L  S+  YEKLL+A+R   EH   QRLRK++E++
Sbjct: 619 GIDEVIIDMERLKQGFQKLLYEGQHHLMLSRESYEKLLVAKRKTMEHSNDQRLRKMREIS 678

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISS 185
           +AA  ARS LH+KVR+ RAS ++   P A+  +    + +N++ T   K+ M       S
Sbjct: 679 EAAAMARSILHKKVRQHRASLVQPLQP-ALTHKSQHKLETNSQRTTDDKHQMERR----S 738

Query: 186 TSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDI 244
            S +S   SE+ E P VG+ V+VSS GKKATVL VEPSK+E++V+ G++KLKLK  DI
Sbjct: 739 ASFLSS--SEKFELPKVGNVVFVSSLGKKATVLKVEPSKEEIVVQAGNMKLKLKLDDI 789

[Close]

BLAST of Lsi07G003320.1 vs. TrEMBL
Match: B9I2A9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s00450g PE=4 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 134/239 (56.07%), Postives = 178/239 (74.48%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SN+ FENACMEFDEVNLKPTYKI+WGVPGRSNAINI+E+LGLP+ VV +AREL+GA SA
Sbjct: 424 YSNDAFENACMEFDEVNLKPTYKILWGVPGRSNAINISEKLGLPSVVVSNARELHGAASA 483

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           +I+EVI DME  K+   +LL EA+++L  SKNL+EKL LARR I EHG  QR RK+++++
Sbjct: 484 EINEVIIDMERFKQDSQELLHEARHHLMLSKNLHEKLKLARRKIKEHGTEQRYRKMRQIS 543

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISS 185
           +AA+ ARS LH+KVR+LRA   +   P+A D +Q +   S++R TA  KN     +  +S
Sbjct: 544 EAASMARSILHKKVRQLRAHATQTFQPTA-DQKQLS--TSDSRFTAEAKNGRPTESMSTS 603

Query: 186 TSNIS-QPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDI 244
              I+ QP +   E P VGD V VSS G+KATVL V+ SK+E++V+ G++KLKLK  +I
Sbjct: 604 VVEINKQPSAAMTELPEVGDMVQVSSLGRKATVLRVDRSKEEILVQAGNMKLKLKLAEI 659

[Close]

BLAST of Lsi07G003320.1 vs. TAIR10
Match: AT5G54090.1 (AT5G54090.1 DNA mismatch repair protein MutS, type 2)

HSP 1 Score: 202.2 bits (513), Expect = 3.6e-52
Identity = 112/242 (46.28%), Postives = 165/242 (68.18%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SN  FENACMEFD++NLKPTYKI+WGVPGRSNAINIA+RLGLP  +++ ARELYG+ SA
Sbjct: 565 YSNSAFENACMEFDDLNLKPTYKILWGVPGRSNAINIADRLGLPCDIIESARELYGSASA 624

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           +I+EVI DME  K++Y  LL E++  +  S+ L+E LL A++NI +H  ++R +  QE+T
Sbjct: 625 EINEVILDMERYKQEYQRLLNESRVYIRLSRELHENLLTAQKNINDHSTKERRKMRQELT 684

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISS 185
           +A +  RS L + +++ R+S  + S      S+    + +  +TT  + N       I S
Sbjct: 685 QAGSMTRSTLRRTLQQFRSSAGKSS-----QSKVATQLQTKVKTTKDEDN------GIRS 744

Query: 186 TSNISQ---PRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTD 245
           +S + +   P +   + P VG +V+VSS GKKATVL VE SK E++V+VG +K+K+K TD
Sbjct: 745 SSVVERRPLPEAAAQKVPEVGSSVFVSSLGKKATVLKVEHSKKEILVQVGIMKMKVKLTD 795

[Close]

BLAST of Lsi07G003320.1 vs. TAIR10
Match: AT1G65070.2 (AT1G65070.2 DNA mismatch repair protein MutS, type 2)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 64/258 (24.81%), Postives = 114/258 (44.19%), Query Frame = 1


Query: 11  FENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSAQIDEV 70
           F+NA MEF    L+PT++++WG  G SNA+ +A+ +G    ++++A +          E 
Sbjct: 530 FQNAAMEFSMETLQPTFRVLWGSTGLSNALRVAKSIGFNKRILENAHKW--------TEK 589

Query: 71  ITDMECIKKKYGDLLQ---EAQNNL-----------TESKNLYEKLLLARRNITEHGRRQ 130
           +   + +++K G L Q   E +N L            +  NLY +L     ++ +  R  
Sbjct: 590 LNPEQDVERK-GSLFQSLMEERNKLKLQATKTAAFHRDLMNLYHELEHESHDLDKRERAL 649

Query: 131 RLRKVQEVTKAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNL 190
             ++ Q+V +   +A+S + + V E   S +E                    T A + N 
Sbjct: 650 LKKETQKVQEDLNSAKSKMERLVAEFE-SQLEI-------------------TQADQYNS 709

Query: 191 MALHTHISSTSNIS-----QPRSEEPEF----PTVGDTVYVSSFGKKATVLSVEPSKDE- 244
           + L T  +    I       P S E E+    P  G+ V V+  G K   +  EP  D+ 
Sbjct: 710 LILKTEEAVAEIIEACCPMDPDSLEEEYSDYSPQAGEKVLVTGLGDKLGTVVEEPGDDDD 758

[Close]

BLAST of Lsi07G003320.1 vs. NCBI nr
Match: gi|659125868|ref|XP_008462897.1| (PREDICTED: uncharacterized protein LOC103501168 isoform X3 [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 8.9e-117
Identity = 223/241 (92.53%), Postives = 232/241 (96.27%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SNEVFENACMEFDEVNLKPTYKI+WGVPGRSNAINIAERLGLP+SVVDDARELYGAGSA
Sbjct: 575 YSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPSSVVDDARELYGAGSA 634

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNI EHGRRQRLRKVQEV 
Sbjct: 635 QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNIIEHGRRQRLRKVQEVA 694

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHT-HIS 185
           KAATTARSNLHQK RELRASTIEYSPPSAI  RQ AGINSNNRTT+GKK+LM LHT HIS
Sbjct: 695 KAATTARSNLHQKGRELRASTIEYSPPSAIGRRQHAGINSNNRTTSGKKDLMGLHTSHIS 754

Query: 186 STSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDIM 245
           STS+ISQP+SEEPEFPTVGDTVYVSSFGKKATVL VEPSKDEVIVRVG++KLKLKFTDIM
Sbjct: 755 STSDISQPQSEEPEFPTVGDTVYVSSFGKKATVLGVEPSKDEVIVRVGTIKLKLKFTDIM 814

[Close]

BLAST of Lsi07G003320.1 vs. NCBI nr
Match: gi|659125866|ref|XP_008462896.1| (PREDICTED: uncharacterized protein LOC103501168 isoform X2 [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 8.9e-117
Identity = 223/241 (92.53%), Postives = 232/241 (96.27%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SNEVFENACMEFDEVNLKPTYKI+WGVPGRSNAINIAERLGLP+SVVDDARELYGAGSA
Sbjct: 597 YSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPSSVVDDARELYGAGSA 656

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNI EHGRRQRLRKVQEV 
Sbjct: 657 QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNIIEHGRRQRLRKVQEVA 716

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHT-HIS 185
           KAATTARSNLHQK RELRASTIEYSPPSAI  RQ AGINSNNRTT+GKK+LM LHT HIS
Sbjct: 717 KAATTARSNLHQKGRELRASTIEYSPPSAIGRRQHAGINSNNRTTSGKKDLMGLHTSHIS 776

Query: 186 STSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDIM 245
           STS+ISQP+SEEPEFPTVGDTVYVSSFGKKATVL VEPSKDEVIVRVG++KLKLKFTDIM
Sbjct: 777 STSDISQPQSEEPEFPTVGDTVYVSSFGKKATVLGVEPSKDEVIVRVGTIKLKLKFTDIM 836

[Close]

BLAST of Lsi07G003320.1 vs. NCBI nr
Match: gi|659125864|ref|XP_008462895.1| (PREDICTED: uncharacterized protein LOC103501168 isoform X1 [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 8.9e-117
Identity = 223/241 (92.53%), Postives = 232/241 (96.27%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SNEVFENACMEFDEVNLKPTYKI+WGVPGRSNAINIAERLGLP+SVVDDARELYGAGSA
Sbjct: 598 YSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPSSVVDDARELYGAGSA 657

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNI EHGRRQRLRKVQEV 
Sbjct: 658 QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNIIEHGRRQRLRKVQEVA 717

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHT-HIS 185
           KAATTARSNLHQK RELRASTIEYSPPSAI  RQ AGINSNNRTT+GKK+LM LHT HIS
Sbjct: 718 KAATTARSNLHQKGRELRASTIEYSPPSAIGRRQHAGINSNNRTTSGKKDLMGLHTSHIS 777

Query: 186 STSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDIM 245
           STS+ISQP+SEEPEFPTVGDTVYVSSFGKKATVL VEPSKDEVIVRVG++KLKLKFTDIM
Sbjct: 778 STSDISQPQSEEPEFPTVGDTVYVSSFGKKATVLGVEPSKDEVIVRVGTIKLKLKFTDIM 837

[Close]

BLAST of Lsi07G003320.1 vs. NCBI nr
Match: gi|659125870|ref|XP_008462898.1| (PREDICTED: uncharacterized protein LOC103501168 isoform X4 [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 8.9e-117
Identity = 223/241 (92.53%), Postives = 232/241 (96.27%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SNEVFENACMEFDEVNLKPTYKI+WGVPGRSNAINIAERLGLP+SVVDDARELYGAGSA
Sbjct: 514 YSNEVFENACMEFDEVNLKPTYKILWGVPGRSNAINIAERLGLPSSVVDDARELYGAGSA 573

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNI EHGRRQRLRKVQEV 
Sbjct: 574 QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNIIEHGRRQRLRKVQEVA 633

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHT-HIS 185
           KAATTARSNLHQK RELRASTIEYSPPSAI  RQ AGINSNNRTT+GKK+LM LHT HIS
Sbjct: 634 KAATTARSNLHQKGRELRASTIEYSPPSAIGRRQHAGINSNNRTTSGKKDLMGLHTSHIS 693

Query: 186 STSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDIM 245
           STS+ISQP+SEEPEFPTVGDTVYVSSFGKKATVL VEPSKDEVIVRVG++KLKLKFTDIM
Sbjct: 694 STSDISQPQSEEPEFPTVGDTVYVSSFGKKATVLGVEPSKDEVIVRVGTIKLKLKFTDIM 753

[Close]

BLAST of Lsi07G003320.1 vs. NCBI nr
Match: gi|449438987|ref|XP_004137269.1| (PREDICTED: uncharacterized protein LOC101220812 isoform X1 [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 5.4e-114
Identity = 218/240 (90.83%), Postives = 227/240 (94.58%), Query Frame = 1


Query: 6   HSNEVFENACMEFDEVNLKPTYKIVWGVPGRSNAINIAERLGLPNSVVDDARELYGAGSA 65
           +SNEVFENACMEFDEVNLKPTYKI+WG+PGRSNAINIAERLGLP+SVVDDARELYGAGSA
Sbjct: 598 YSNEVFENACMEFDEVNLKPTYKILWGIPGRSNAINIAERLGLPSSVVDDARELYGAGSA 657

Query: 66  QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNITEHGRRQRLRKVQEVT 125
           QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNI EHGRRQRLRKVQEV 
Sbjct: 658 QIDEVITDMECIKKKYGDLLQEAQNNLTESKNLYEKLLLARRNIIEHGRRQRLRKVQEVA 717

Query: 126 KAATTARSNLHQKVRELRASTIEYSPPSAIDSRQPAGINSNNRTTAGKKNLMALHTHISS 185
            AATTARSNLHQK RELRASTIEY+ PSAID  Q AGINSNNRTTAGKK+LMAL   ISS
Sbjct: 718 NAATTARSNLHQKGRELRASTIEYTSPSAIDRMQRAGINSNNRTTAGKKDLMALRRQISS 777

Query: 186 TSNISQPRSEEPEFPTVGDTVYVSSFGKKATVLSVEPSKDEVIVRVGSVKLKLKFTDIMR 245
           TS+ISQP+SEEP FPTVGDTVYVSSFGKKATVL VEPSKDEVIVRVGS+KLKLKFTDIMR
Sbjct: 778 TSDISQPQSEEPLFPTVGDTVYVSSFGKKATVLGVEPSKDEVIVRVGSIKLKLKFTDIMR 837

The following BLAST results are available for this feature:

BLAST of Lsi07G003320.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MUTS2_SYNY3	8.2e-22	29.96	Endonuclease MutS2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mutS2 PE=3...	[more]
MUTS2_LACSS	1.4e-21	33.33	Endonuclease MutS2 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=mutS2 PE=...	[more]
MUTS2_THERP	3.5e-20	28.86	Endonuclease MutS2 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2...	[more]
MUTS2_ENTFA	5.5e-18	28.14	Endonuclease MutS2 OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=mutS2...	[more]
MUTS2_LACCB	2.1e-17	27.88	Endonuclease MutS2 OS=Lactobacillus casei (strain BL23) GN=mutS2 PE=3 SV=1	[more]

BLAST of Lsi07G003320.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVZ5_CUCSA	3.7e-114	90.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G114240 PE=4 SV=1	[more]
A0A0D2UA50_GOSRA	1.8e-63	55.19	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G263400 PE=4 SV=1	[more]
F6H7A2_VITVI	1.2e-59	53.36	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00680 PE=4 SV=...	[more]
M5XS10_PRUPE	1.2e-59	55.88	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001618mg PE=4 SV=1	[more]
B9I2A9_POPTR	1.2e-59	56.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s00450g PE=4 SV=2	[more]

BLAST of Lsi07G003320.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54090.1	3.6e-52	46.28	DNA mismatch repair protein MutS, type 2	[more]
AT1G65070.2	1.3e-09	24.81	DNA mismatch repair protein MutS, type 2	[more]

BLAST of Lsi07G003320.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125868\|ref\|XP_008462897.1\|	8.9e-117	92.53	PREDICTED: uncharacterized protein LOC103501168 isoform X3 [Cucumis melo]	[more]
gi\|659125866\|ref\|XP_008462896.1\|	8.9e-117	92.53	PREDICTED: uncharacterized protein LOC103501168 isoform X2 [Cucumis melo]	[more]
gi\|659125864\|ref\|XP_008462895.1\|	8.9e-117	92.53	PREDICTED: uncharacterized protein LOC103501168 isoform X1 [Cucumis melo]	[more]
gi\|659125870\|ref\|XP_008462898.1\|	8.9e-117	92.53	PREDICTED: uncharacterized protein LOC103501168 isoform X4 [Cucumis melo]	[more]
gi\|449438987\|ref\|XP_004137269.1\|	5.4e-114	90.83	PREDICTED: uncharacterized protein LOC101220812 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006298	mismatch repair
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0030983	mismatched DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Lsi07G003320	Lsi07G003320	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Lsi07G003320.1	Lsi07G003320.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi07G003320.1.CDS.1	Lsi07G003320.1.CDS.1	CDS
Lsi07G003320.1.CDS.2	Lsi07G003320.1.CDS.2	CDS
Lsi07G003320.1.CDS.3	Lsi07G003320.1.CDS.3	CDS
Lsi07G003320.1.CDS.4	Lsi07G003320.1.CDS.4	CDS
Lsi07G003320.1.CDS.5	Lsi07G003320.1.CDS.5	CDS
Lsi07G003320.1.CDS.6	Lsi07G003320.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Lsi07G003320.1.three_prime_UTR.1	Lsi07G003320.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 5..61 score: 8.1
None	No IPR available	unknown	Coil	Coil	coord: 78..105 scor
None	No IPR available	PANTHER	PTHR11361	DNA MISMATCH REPAIR MUTS RELATED PROTEINS	coord: 7..149 score: 2.8
None	No IPR available	PANTHER	PTHR11361:SF81	DNA MISMATCH REPAIR PROTEIN MUTS, TYPE 2	coord: 7..149 score: 2.8