CmoCh20G010600.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G010600.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Energy-coupling factor transporter ATP-binding protein EcfA1
Location	Cmo_Chr20 : 9777596 .. 9781659 (+)
Sequence length	1054

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACAATTCTTGGGTGATTACAATTCTTGGGTGAATTTCTTCTCCACCATTTCTGCAGCAGCATGCTTTTGAAGAGTTCCATTTTCAATCCCGTTCCGACTTCGCCGCCTCTGCTTCCCCCTCTCTTCTCCGGCTCCCCTTCCAGGTTCCATCACTCTCTTAATTTACTCTCTCTTTCATTGTGTCAATTCTATTCCATTTTCTGCTTTTGTAGTCGTTTTCTTTCCGTTTATTTGCTCTCGTTCTATTTTGTTGGATTCTTGTGTCTGTTTGTGTGTATGCAGGGCAAATCTTACTGAAAATATAGCCATTGAGGGCCGTAACCTCACCTTCTCGATCACGACGCGGCAGGGCAAAATTGTGCCTATTCTTAGGGATTGCTCGCTCCGGATTCCGTCAGGTCAGTTTTGGATGCTTCTTGGACCTAATGGCTGTGGAAAATCCACTCTCTTGAAGGTACAATCCAGATTCACTCACGTTTCCCTTTCTGTAATCTGTATTTGAAGGATTTGGATTGTGATACAGAGGCCTGATTGAGCATTTTTTTCCCTCTTTGAAAGAAGTTTTCTGTTGTTTAGAATAAAATTGAGTCCATACATGTTTCATAACTATTATCTAAAAGAAAAAACAAAAGAAGAGAAAATAGTGACTTCGCTATGCATTGCACTAACATTTTTTTTTAATGACAAACGAAATTTGTTCATTCAATTAATGAAAAGAGACCAATGCTTAAAGAATGAAAGCTTCCCAAAGGAGTAAAAAGAAGCGACCAAGTAGGATTATCCAAAAAATTCTGAAACATTTCTCAAAAAAGAAAAAAAAAATTATCCTACCAAAACACCGAAATAGAAGTCGAGAATGCTGAGCTCCGAGCAAAAGAGATTGAAGGAGGGAGGAGCCAAGGGAATCTGAAGAAAATTGATTTTGGAGGCTGAAAAGAAATTCCAAACAAACCAGAAGATTCTTACCAAACTGAAGCAGAAAATTGGAAGAAACTGATAAAGAGAAGAACAGAAACCCATAAAAGCGTAATCCAATTCCATATTAACAGTTTTGAAAACAAATTAGAAAATTGTTCTGATCTGAACGTGATTTGTCAAGCATGCCGAAAATCCTTACTGTCTTGTATTTTGCATAATATAGTGAAGTCACTTGACAAATATGCTATAACACTAATCTCTGTGGAGGTTCCATCTACTCTAATGCAAGCTTTGGGAGATAATAAGGATGTTATGCATTATGTTTATAGCCTGGGGCTTGAACCTTCGACTTTAGAAAGCATCTTCTTACATTTCAAGTTCTCATTGAGACAACTCTTTGGGTATTGCGATTTACGACTCGTATTTCTTAGTATCCAAAAGAGTACAAAATTTAACACCACTATCAAATGGGCCCTAATATGTCACCATACTTTTGTAGTTCAATAGATCAAATGATGCAAGTTATAAGTCCTCGATGTGTTCACTATGTAGGTCTTGGCTGGTCTTTTGAATGCGTCAACTGGTGCAGTATACGTCAAGAAGCCTAAGTGCTTTGTCTTCCAAAACCCCGACTATCAGGTTACCTTCCTTCATCGTTTTAACCTTCGGTTGGTATATGATAAAATTATAGCTGAATTTAACACCTTGGAAGAGAATTTACTGTTATGGCACAGTTTCTCTTTTTAAGTAAGTAAATATGTTCTGTTTTAACTGTGTGCCTTTTGCTCTTGAAGTAATTGTTGGGTTATTTTGATGTAGTTGGTTTTGCATCAGAGCCACATTGAAAGTTATTATATTAGTTACTACTAACTAGCTATAGTCAGCTCATCCATCCTCTAGAGGACATCTGTATTCTATTTGTGAAACCATCATCAAAACCTAATGCCATTGATTTGAAGAATGGACTTTGTTAGATGAAGTACAACAAAAGTAGTGTTTGAACTCTGTAACTATGAGATATGAATGTAAGAAATACATGACTGATTACTGACTCAACAATATTACTTTCATCTTTGAAAAAGTAGGGGGTGTTGCATCTTAAACTGTCAATTTGTGTTTGATTAATTCTTGTTGTTGACATTGTTACTTAAATGTTGATTGGGAATGTTGACTGTTCAATGGAGTAATTATTTAACATGATATGGCAACAATTAGTATGGGAGAGTGGACTAGTTGAACAAAACAAGTTTGGGTTGGTCAATTTTTTTTTGATTTTATATAGCCTGCCCGTCCCACCAAAATTTTATGCCACTTTATCCTTATTTTATCTAGTTGACATATTTCCTTTTGTCATGTCATTTACAACTTGTTATCCAAATTGTAAGTATTGTTAATATTTTAGTACCAATAATAATGGTATGAACTTAATAAATCAATAAAAAAAAAGTTTAGGAATACAATTGAAGCTTTTGAGAGTTTAGTATCAACACGACTGAATTCAGGGACTAGGTTTGAAATTTGACCTAAAATATATCCTTAGAAGATGGTAGAAACAGCAAGCACAAAGTTGCCGGCTTGAGAAAATCTATTGAATTTCAAACATGCATATGCATTCTTGCAAACAAACAAGCTGTACAGGTTTATCATCTTTCTTTTTGCTCGTATTGTTGTAAGGAACATCTGCTGCAAATAATTCTTTTGTTTGCCAGGTTGTGATGCCTACTGTGGAAGCTGACGTTGCATTTGGCCTCGGTAAGTTAAATCTGACCAATGAAGAAGTTAAATCAAGGGTTCTGGAAGCTCTGAGCTCGGTTGGCATGTCCAGCTACCTTCAGGCAAGTCATATAGTTTTGTAGTTTATCAAAATAGGAAGTTATAAACAACAGCTGAAGTTAGTTTGAAAGTTCCTAATTCTTGTTCCTCAGAGATCCGTTCAAACGCTGAGTGGTGGTCAGAAGCAAAGGGTTGCCATTGCTGGTGCTTTGGCTGAAGCATGTAAAGTGCTTCTATTAGATGAACTGACCACATTCCTCGATGAGAAGGATCAGGTATTTCCTATCATACAAGTAGATTTGTGAATGTTCCATCACATAATCCCAATGGTAGAATTTGACATGCTGTGCTGATTATTGCAAACAAATCTGGTCTCCACCCACTCCCTAGGCGGCCAATGTGATAGGCTTGGAATGTTCAGAGATATCCTTCAAAATTTGGTTCATGGTTTAAGTTGAAAATTATTAATTAAAACCTCGATTAGATAGGTGAAACTTTTCTAGCAATTCGCAGGGTAGGTCATGAGCATAATAATTTATTTACTAGAAACTTGATATAGACACACGTTTTCTTCATTTACTTAATCCTTAAATTCGTACACGAGCAAGGGTTGGAAGTCATATGTAGCATCAAAGTTTCAAAACAAATTTAAGTTCTTATTATTATGACATATTAATGATAAGGACTAAAATAGCCCTTTTTATGCACAATAAAGTTCTGGTTAAACTATTAAAGATAAATTAATGTGGTATCAAGTTTCTAAATAAATTTCATGTAGTATGGAGACTAAAATAGAACATTTTAAAGATAGAGAAACTAAAATAGACCATTTAAATTTTAGGAGACAAAACGAAATATGTAGGAAAGTCCTTGGACCAAAATAAAATTTAAACAAACCATTTACTTTTTTGAGGTTGTATCTATCCTCTTATTTTGTTATCCTTTTTCCACATTTTCTTTTCTAAATCAGATGGGGGTGATCAAAGCAGTTAGGAATTCTTTGCACAATTCTGAAGATGTTACAGCATTATGGGTGACCCATCGCTTAGAAGAACTCGAGTATGCTGATGGCGCTATCTACATGGAAGACGGGAAAGTCATCATGCATGGTGATGTGGAAAGTGTCCAAAGTTTTATCAAAACGAAACAATCAGATTATATCAAGCGTATTTACTATTCGTGACTGTCATCTCTCTTTCAAGTGATGTTTTTCTTGTTACATTATTATAACATTGCATTATATAGTTTTGTATCATCTAGTTCCATAGTAAAATCATTCAGTTGTTGCATTATTTCATTACATAATGAAGAAAGTTTTTATACTCCTTTTCTGCTTCCATCTAATTAACCTTGATGAATATATCAACCGC

mRNA sequence

ATTACAATTCTTGGGTGATTACAATTCTTGGGTGAATTTCTTCTCCACCATTTCTGCAGCAGCATGCTTTTGAAGAGTTCCATTTTCAATCCCGTTCCGACTTCGCCGCCTCTGCTTCCCCCTCTCTTCTCCGGCTCCCCTTCCAGGGCAAATCTTACTGAAAATATAGCCATTGAGGGCCGTAACCTCACCTTCTCGATCACGACGCGGCAGGGCAAAATTGTGCCTATTCTTAGGGATTGCTCGCTCCGGATTCCGTCAGGTCAGTTTTGGATGCTTCTTGGACCTAATGGCTGTGGAAAATCCACTCTCTTGAAGGTCTTGGCTGGTCTTTTGAATGCGTCAACTGGTGCAGTATACGTCAAGAAGCCTAAGTGCTTTGTCTTCCAAAACCCCGACTATCAGGTTGTGATGCCTACTGTGGAAGCTGACGTTGCATTTGGCCTCGGTAAGTTAAATCTGACCAATGAAGAAGTTAAATCAAGGGTTCTGGAAGCTCTGAGCTCGGTTGGCATGTCCAGCTACCTTCAGAGATCCGTTCAAACGCTGAGTGGTGGTCAGAAGCAAAGGGTTGCCATTGCTGGTGCTTTGGCTGAAGCATGTAAAGTGCTTCTATTAGATGAACTGACCACATTCCTCGATGAGAAGGATCAGATGGGGGTGATCAAAGCAGTTAGGAATTCTTTGCACAATTCTGAAGATGTTACAGCATTATGGGTGACCCATCGCTTAGAAGAACTCGAGTATGCTGATGGCGCTATCTACATGGAAGACGGGAAAGTCATCATGCATGGTGATGTGGAAAGTGTCCAAAGTTTTATCAAAACGAAACAATCAGATTATATCAAGCGTATTTACTATTCGTGACTGTCATCTCTCTTTCAAGTGATGTTTTTCTTGTTACATTATTATAACATTGCATTATATAGTTTTGTATCATCTAGTTCCATAGTAAAATCATTCAGTTGTTGCATTATTTCATTACATAATGAAGAAAGTTTTTATACTCCTTTTCTGCTTCCATCTAATTAACCTTGATGAATATATCAACCGC

Coding sequence (CDS)

ATGCTTTTGAAGAGTTCCATTTTCAATCCCGTTCCGACTTCGCCGCCTCTGCTTCCCCCTCTCTTCTCCGGCTCCCCTTCCAGGGCAAATCTTACTGAAAATATAGCCATTGAGGGCCGTAACCTCACCTTCTCGATCACGACGCGGCAGGGCAAAATTGTGCCTATTCTTAGGGATTGCTCGCTCCGGATTCCGTCAGGTCAGTTTTGGATGCTTCTTGGACCTAATGGCTGTGGAAAATCCACTCTCTTGAAGGTCTTGGCTGGTCTTTTGAATGCGTCAACTGGTGCAGTATACGTCAAGAAGCCTAAGTGCTTTGTCTTCCAAAACCCCGACTATCAGGTTGTGATGCCTACTGTGGAAGCTGACGTTGCATTTGGCCTCGGTAAGTTAAATCTGACCAATGAAGAAGTTAAATCAAGGGTTCTGGAAGCTCTGAGCTCGGTTGGCATGTCCAGCTACCTTCAGAGATCCGTTCAAACGCTGAGTGGTGGTCAGAAGCAAAGGGTTGCCATTGCTGGTGCTTTGGCTGAAGCATGTAAAGTGCTTCTATTAGATGAACTGACCACATTCCTCGATGAGAAGGATCAGATGGGGGTGATCAAAGCAGTTAGGAATTCTTTGCACAATTCTGAAGATGTTACAGCATTATGGGTGACCCATCGCTTAGAAGAACTCGAGTATGCTGATGGCGCTATCTACATGGAAGACGGGAAAGTCATCATGCATGGTGATGTGGAAAGTGTCCAAAGTTTTATCAAAACGAAACAATCAGATTATATCAAGCGTATTTACTATTCGTGA

Homology

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BLAST of CmoCh20G010600.1 vs. Swiss-Prot
Match: AB10I_ARATH (ABC transporter I family member 10, chloroplastic OS=Arabidopsis thaliana GN=ABCI10 PE=2 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.2e-96
Identity = 180/260 (69.23%), Postives = 215/260 (82.69%), Query Frame = 1


Query: 14  SPPLLPPLFSGSPS-------RANLTENIAIEGRNLTFSITTRQGKIVPILRDCSLRIPS 73
           SPP L PL S S S       R   ++N+A+E RNL FS++TRQG  VPILRDCS RIPS
Sbjct: 10  SPPRLFPLRSISSSVSPSGSYRIKFSDNVAVECRNLCFSVSTRQGISVPILRDCSFRIPS 69

Query: 74  GQFWMLLGPNGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTVEADVAF 133
           GQ WM+LGPNGCGKSTLLK+LAG++N S+G V+V+KPK FVFQNPD+QVVMPTVEADVAF
Sbjct: 70  GQLWMILGPNGCGKSTLLKILAGVVNPSSGTVFVEKPKNFVFQNPDHQVVMPTVEADVAF 129

Query: 134 GLGKL-NLTNEEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLL 193
           GLGK  ++  EEVKSRV++AL +VGM  Y+QR +QTLSGGQKQR+AIAGALAEACKVLLL
Sbjct: 130 GLGKYHDMNQEEVKSRVIKALEAVGMRDYMQRPIQTLSGGQKQRIAIAGALAEACKVLLL 189

Query: 194 DELTTFLDEKDQMGVIKAVRNSLHNSE-DVTALWVTHRLEELEYADGAIYMEDGKVIMHG 253
           DELTTFLDE DQMGVIKAV++ ++  + DVTALWVTHRLEEL+YADGA+YME+G+V+ HG
Sbjct: 190 DELTTFLDESDQMGVIKAVKDLINAKKGDVTALWVTHRLEELKYADGAVYMENGRVVRHG 249

Query: 254 DVESVQSFIKTKQSDYIKRI 265
           D  ++  FIK KQS YI +I
Sbjct: 250 DAATISDFIKAKQSSYIDQI 269

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BLAST of CmoCh20G010600.1 vs. Swiss-Prot
Match: ECFA1_LACS1 (Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Lactobacillus salivarius (strain UCC118) GN=ecfA1 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.9e-37
Identity = 99/241 (41.08%), Postives = 140/241 (58.09%), Query Frame = 1


Query: 30  NLTENIAIEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNGCGKSTLLKVLAG 89
           +LT+   IE  NL+F    RQ K   IL++ +L I  GQ+  L+G NG GKSTL +++ G
Sbjct: 2   SLTDGNIIEIDNLSFKYA-RQNKC--ILKNLTLNIKDGQWIALIGHNGSGKSTLARLIDG 61

Query: 90  LLNASTGAVYV-------------KKPKCFVFQNPDYQVVMPTVEADVAFGLGKLNLTNE 149
           LL A +G++ V             +K    VFQNPD Q V   VE+D+AFGL    +  E
Sbjct: 62  LLKAESGSIKVDGYEMNEKNIWDIRKKIGMVFQNPDNQFVGADVESDIAFGLENQGVPRE 121

Query: 150 EVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEKD 209
           E+ SRV +AL  VGM  +       LSGGQKQRVAIAG LA   K+++LDE T+ LD + 
Sbjct: 122 EMVSRVADALKVVGMEKFATHEPARLSGGQKQRVAIAGVLALRPKIIILDEATSMLDPEG 181

Query: 210 QMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVIMHGDVESVQSFIKTK 258
           + G+I  +++ L +    T + +TH ++E   AD  I ++DGK+I  G  ES+  FIK  
Sbjct: 182 RKGLITLIKD-LKDEYKFTVISITHDIDEATLADRVIVLDDGKIIDDGKPESI--FIKND 236

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BLAST of CmoCh20G010600.1 vs. Swiss-Prot
Match: ECFA1_CALS4 (Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=ecfA1 PE=3 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-35
Identity = 95/242 (39.26%), Postives = 134/242 (55.37%), Query Frame = 1


Query: 37  IEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNASTG 96
           I  +N++F  +  + K  P+L+D +L+   GQF  ++G NG GKSTL K    LL  + G
Sbjct: 5   IRAQNVSFCYSEGESKSPPVLKDINLQFEKGQFIGIIGHNGSGKSTLAKHFNALLLPTKG 64

Query: 97  AVYVK--------------KPKCFVFQNPDYQVVMPTVEADVAFGLGKLNLTNEEVKSRV 156
            VYVK              +    VFQNPD Q+V   VE DVAFG   L +  EE++ RV
Sbjct: 65  NVYVKDMDTKDAKHLWDIRQTAGLVFQNPDNQIVAAIVEEDVAFGPENLGIPPEEIRKRV 124

Query: 157 LEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEKDQMGVIK 216
             AL +VGM  Y       LSGGQKQRVAIAG +A   + ++LDE T  LD   +  VI 
Sbjct: 125 EYALKAVGMWEYKDFPPHMLSGGQKQRVAIAGIIAMKPECIVLDEPTAMLDPIGRREVIS 184

Query: 217 AVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVIMHGDVESVQSFIKTKQSDYIK 265
            ++  L+  E +T + +TH +EE+  AD  I M+DGKV++ G  + V      K+ + +K
Sbjct: 185 TIK-KLNKEEGITVILITHFMEEVVDADRVIVMDDGKVVLDGTPKEV-----FKEVEVLK 240

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BLAST of CmoCh20G010600.1 vs. Swiss-Prot
Match: ECFA1_STRPB (Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=ecfA1 PE=3 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 4.6e-34
Identity = 85/217 (39.17%), Postives = 129/217 (59.45%), Query Frame = 1


Query: 37  IEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNASTG 96
           IE + +TF+    Q K  P L   S  +  G++  ++G NG GKST ++++ GLL   +G
Sbjct: 5   IELKKVTFNYHKDQEK--PTLDGVSFHVKQGEWLSIIGHNGSGKSTTIRLIDGLLEPESG 64

Query: 97  AVYV-------------KKPKCFVFQNPDYQVVMPTVEADVAFGLGKLNLTNEEVKSRVL 156
           +V V             +     VFQNPD Q V  TVE DVAFGL    + +E++K RV 
Sbjct: 65  SVIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVN 124

Query: 157 EALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEKDQMGVIKA 216
            AL  VGM ++ ++    LSGGQKQRVAIAGA+A   K+++LDE T+ LD K ++ +IK 
Sbjct: 125 HALELVGMQNFKEKEPARLSGGQKQRVAIAGAVAMKPKIIILDEATSMLDPKGRLELIKT 184

Query: 217 VRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV 241
           ++N + +   +T + +TH L+E+  +D  + M+DG+V
Sbjct: 185 IKN-IRDDYQLTVISITHDLDEVALSDRVLVMKDGQV 218

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BLAST of CmoCh20G010600.1 vs. Swiss-Prot
Match: ECFA1_LACBA (Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=ecfA1 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.6e-34
Identity = 89/224 (39.73%), Postives = 134/224 (59.82%), Query Frame = 1


Query: 31  LTENIAIEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNGCGKSTLLKVLAGL 90
           +TENI I   +LT+     Q    P L D S  + +G++  ++G NG GKSTL K L GL
Sbjct: 1   MTENI-ISVDHLTYQYDENQA---PALTDVSFTVHAGEWLAIVGHNGSGKSTLAKSLDGL 60

Query: 91  LNASTGAV-------------YVKKPKCFVFQNPDYQVVMPTVEADVAFGLGKLNLTNEE 150
           L  + G+V              V++    +FQNPD Q V  TVE DVAFGL    ++ +E
Sbjct: 61  LPFTQGSVTVGGITLTPETVWQVREQIGMIFQNPDNQFVGATVEDDVAFGLENRQISRDE 120

Query: 151 VKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEKDQ 210
           +  RV  AL+ VGM+S+ QR   +LSGGQKQRVA+AG +A A K+L+LDE T+ LD + +
Sbjct: 121 MVPRVQAALAQVGMTSFAQREPSSLSGGQKQRVALAGIVAIAPKILILDEATSMLDPQGR 180

Query: 211 MGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVI 242
           + ++  VR  L   +++T + +TH ++E   AD  + ++DG+++
Sbjct: 181 IEMLAIVR-QLRQQQNLTVISITHDIDEAASADRVLVIDDGRLV 219

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BLAST of CmoCh20G010600.1 vs. TrEMBL
Match: A0A0A0LK85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336110 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 2.4e-130
Identity = 240/267 (89.89%), Postives = 251/267 (94.01%), Query Frame = 1


Query: 1   MLLKSSIFNPVPTSPPLLPPLFSGSPSRANLTENIAIEGRNLTFSITTRQGKIVPILRDC 60
           M+LKSS FN V  SPPLL PLFS  PSR N TENIAIEGRNL FSITT+QGK VPILRDC
Sbjct: 1   MVLKSSSFNLVAPSPPLLSPLFSNPPSRINTTENIAIEGRNLNFSITTKQGKSVPILRDC 60

Query: 61  SLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTV 120
           SLRIPSG+FWMLLGPNGCGKSTLLKVLAGLLN ++GAVYVKKPKCFVFQNPDYQVVMPTV
Sbjct: 61  SLRIPSGEFWMLLGPNGCGKSTLLKVLAGLLNTTSGAVYVKKPKCFVFQNPDYQVVMPTV 120

Query: 121 EADVAFGLGKLNLTNEEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC 180
           EADVAFGLGKLNL N+EVKSRVLEALS+VGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC
Sbjct: 121 EADVAFGLGKLNLNNDEVKSRVLEALSAVGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC 180

Query: 181 KVLLLDELTTFLDEKDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV 240
           KVLLLDELTTFLDE DQ GVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV
Sbjct: 181 KVLLLDELTTFLDENDQTGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV 240

Query: 241 IMHGDVESVQSFIKTKQSDYIKRIYYS 268
           +MHGDV S+QSFI+TKQSDYIKRIY+S
Sbjct: 241 VMHGDVASIQSFIQTKQSDYIKRIYHS 267

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BLAST of CmoCh20G010600.1 vs. TrEMBL
Match: A0A0D2VUW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G035000 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.5e-105
Identity = 193/247 (78.14%), Postives = 217/247 (87.85%), Query Frame = 1


Query: 18  LPPLFSGSPSRANLTENIAIEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNG 77
           L PL S S +R N TE++AIEGRN+ FS+ TRQG+IVPIL+DCS+RIPSGQ WMLLGPNG
Sbjct: 14  LSPLRSTSSTRDNATESVAIEGRNINFSVNTRQGRIVPILKDCSIRIPSGQLWMLLGPNG 73

Query: 78  CGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTVEADVAFGLGKLNLTNEE 137
           CGKSTLLK+LAGLL  + GA+YV++PK +VFQNPD+QVVMPTVEADVAFGLG+LNLTN E
Sbjct: 74  CGKSTLLKILAGLLTPTNGALYVRRPKSYVFQNPDHQVVMPTVEADVAFGLGRLNLTNSE 133

Query: 138 VKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEKDQ 197
           V+SRV +AL +VGMS YLQR VQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDE DQ
Sbjct: 134 VRSRVSKALEAVGMSEYLQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQ 193

Query: 198 MGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVIMHGDVESVQSFIKTKQ 257
           MGVIKAV+N L  S +VTALWVTHRLEELEYADGA+YMEDG+VIMHGD  S+  FIK KQ
Sbjct: 194 MGVIKAVQNLLDISGEVTALWVTHRLEELEYADGAVYMEDGRVIMHGDAASINKFIKAKQ 253

Query: 258 SDYIKRI 265
           S YI RI
Sbjct: 254 SSYINRI 260

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BLAST of CmoCh20G010600.1 vs. TrEMBL
Match: A0A061DIV0_THECC (ABC transporter family protein (Fragment) OS=Theobroma cacao GN=TCM_046684 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 5.7e-100
Identity = 181/236 (76.69%), Postives = 209/236 (88.56%), Query Frame = 1


Query: 16  PLLPPLFSGSPSRANLTENIAIEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGP 75
           P LPPL S S +R N TEN+AIEGR + FS+ TRQGK+VPIL+DCS+RIPSGQ WMLLGP
Sbjct: 14  PHLPPLHSTSSTRDNATENVAIEGRKINFSVNTRQGKMVPILKDCSIRIPSGQLWMLLGP 73

Query: 76  NGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTVEADVAFGLGKLNLTN 135
           NGCGKSTLLK+LAGLL  S G ++V++PK +VFQNPD+QVVMPTVEADVAFGLG+LNLTN
Sbjct: 74  NGCGKSTLLKILAGLLTPSNGTLFVRRPKSYVFQNPDHQVVMPTVEADVAFGLGRLNLTN 133

Query: 136 EEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEK 195
            EV+ RV +AL +VGMS Y+QR VQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDE 
Sbjct: 134 AEVRMRVSKALDAVGMSEYVQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDES 193

Query: 196 DQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVIMHGDVESVQS 252
           DQ+GVIKAV+N LH S +VTALWVTHRLEELEYADGA+YMEDG+V+MHGD  S+++
Sbjct: 194 DQIGVIKAVQNLLHISGEVTALWVTHRLEELEYADGAVYMEDGRVVMHGDAASIRN 249

[Close]

BLAST of CmoCh20G010600.1 vs. TrEMBL
Match: W9QWU9_9ROSA (ABC transporter I family member 10 OS=Morus notabilis GN=L484_020707 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.7e-99
Identity = 192/255 (75.29%), Postives = 218/255 (85.49%), Query Frame = 1


Query: 17  LLPPLFSGSPSRANLT----ENIAIEGRNLTFSITT-RQGKI--VPILRDCSLRIPSGQF 76
           LLPPL S S S +N+      N+AIEGRNL+F ++T +QGK   +PIL DCSLRIPSGQF
Sbjct: 19  LLPPLHSTSFSSSNVATENNNNVAIEGRNLSFWVSTAKQGKTKTLPILNDCSLRIPSGQF 78

Query: 77  WMLLGPNGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTVEADVAFGLG 136
           WMLLGPNGCGKSTLLK+LAGLLN + G V VK+PK +VFQNPD+QVVMPTV+ADVAFGLG
Sbjct: 79  WMLLGPNGCGKSTLLKILAGLLNPTRGTVVVKRPKSYVFQNPDHQVVMPTVDADVAFGLG 138

Query: 137 KLNLTNEEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELT 196
           K NLT +EVK RV +AL +VGM SY QRSVQTLSGGQKQRVAIAGALAEACKVLLLDELT
Sbjct: 139 KFNLTRDEVKFRVSKALDAVGMLSYQQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELT 198

Query: 197 TFLDEKDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVIMHGDVESV 256
           TFLDE DQ+GVIKAVRNSL +S DVTALWVTHRLEELEYADGA+YMEDG+V+MHGD   V
Sbjct: 199 TFLDESDQLGVIKAVRNSLDSSGDVTALWVTHRLEELEYADGAVYMEDGRVVMHGDAVGV 258

Query: 257 QSFIKTKQSDYIKRI 265
            +FIK +Q+ YIK+I
Sbjct: 259 MNFIKARQAAYIKQI 273

[Close]

BLAST of CmoCh20G010600.1 vs. TrEMBL
Match: I1KBJ4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G153500 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.2e-99
Identity = 185/252 (73.41%), Postives = 216/252 (85.71%), Query Frame = 1


Query: 17  LLPPLFSGSPSRA----NLTENIAIEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWML 76
           L+ PL++  P+ A    N  EN AIEGRNL FS TTRQ + VP+L+DCS+RIP GQFWML
Sbjct: 13  LVAPLYATLPTTATTSGNRPENFAIEGRNLKFSFTTRQTQDVPVLKDCSIRIPCGQFWML 72

Query: 77  LGPNGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTVEADVAFGLGKLN 136
           LGPNGCGKSTLLK+LAGLL  ++G VYV  PK FVFQNPD+QVVMPTV++DVAFGLGK+N
Sbjct: 73  LGPNGCGKSTLLKILAGLLTPTSGTVYVNGPKSFVFQNPDHQVVMPTVDSDVAFGLGKIN 132

Query: 137 LTNEEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFL 196
           L ++EV+SRV  AL +VG+S Y++RSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFL
Sbjct: 133 LAHDEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFL 192

Query: 197 DEKDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVIMHGDVESVQSF 256
           DE DQ+GVIKAVRNS+  S +VTALWVTHRLEELEYADGAIYMEDGKV+MHGD  S++SF
Sbjct: 193 DEADQVGVIKAVRNSVDTSAEVTALWVTHRLEELEYADGAIYMEDGKVVMHGDAASIRSF 252

Query: 257 IKTKQSDYIKRI 265
           I+ +QS YI +I
Sbjct: 253 IEARQSAYITQI 264

[Close]

BLAST of CmoCh20G010600.1 vs. TAIR10
Match: AT4G33460.1 (AT4G33460.1 ABC transporter family protein)

HSP 1 Score: 352.4 bits (903), Expect = 2.4e-97
Identity = 180/260 (69.23%), Postives = 215/260 (82.69%), Query Frame = 1


Query: 14  SPPLLPPLFSGSPS-------RANLTENIAIEGRNLTFSITTRQGKIVPILRDCSLRIPS 73
           SPP L PL S S S       R   ++N+A+E RNL FS++TRQG  VPILRDCS RIPS
Sbjct: 10  SPPRLFPLRSISSSVSPSGSYRIKFSDNVAVECRNLCFSVSTRQGISVPILRDCSFRIPS 69

Query: 74  GQFWMLLGPNGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTVEADVAF 133
           GQ WM+LGPNGCGKSTLLK+LAG++N S+G V+V+KPK FVFQNPD+QVVMPTVEADVAF
Sbjct: 70  GQLWMILGPNGCGKSTLLKILAGVVNPSSGTVFVEKPKNFVFQNPDHQVVMPTVEADVAF 129

Query: 134 GLGKL-NLTNEEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLL 193
           GLGK  ++  EEVKSRV++AL +VGM  Y+QR +QTLSGGQKQR+AIAGALAEACKVLLL
Sbjct: 130 GLGKYHDMNQEEVKSRVIKALEAVGMRDYMQRPIQTLSGGQKQRIAIAGALAEACKVLLL 189

Query: 194 DELTTFLDEKDQMGVIKAVRNSLHNSE-DVTALWVTHRLEELEYADGAIYMEDGKVIMHG 253
           DELTTFLDE DQMGVIKAV++ ++  + DVTALWVTHRLEEL+YADGA+YME+G+V+ HG
Sbjct: 190 DELTTFLDESDQMGVIKAVKDLINAKKGDVTALWVTHRLEELKYADGAVYMENGRVVRHG 249

Query: 254 DVESVQSFIKTKQSDYIKRI 265
           D  ++  FIK KQS YI +I
Sbjct: 250 DAATISDFIKAKQSSYIDQI 269

[Close]

BLAST of CmoCh20G010600.1 vs. TAIR10
Match: AT1G02530.1 (AT1G02530.1 P-glycoprotein 12)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 73/248 (29.44%), Postives = 120/248 (48.39%), Query Frame = 1


Query: 25   SPSRANLTENIA--IEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNGCGKST 84
            S     + EN+   IE R+L+F+   R G  + I RD  L I +G+   L+G +G GKST
Sbjct: 1013 SDETGTVLENVKGDIELRHLSFTYPARPG--IQIFRDLCLTIRAGKTVALVGESGSGKST 1072

Query: 85   LLKVLAGLLNASTGAV-------------YVKKPKCFVFQNPDYQVVMPTVEADVAFGLG 144
            ++ +L    +  +G +             ++++    V Q P   +   T+ A++A+G G
Sbjct: 1073 VISLLQRFYDPDSGQITLDGVELKKLQLKWLRQQMGLVGQEP--VLFNDTIRANIAYGKG 1132

Query: 145  KLNLTNEEVKSRVLEALSSVGMSSYLQRSVQT--------LSGGQKQRVAIAGALAEACK 204
                  E       E  ++    S +Q+   T        LSGGQKQRVAIA A+ +  K
Sbjct: 1133 SEEAATESEIIAAAELANAHKFISSIQQGYDTVVGEKGIQLSGGQKQRVAIARAIVKEPK 1192

Query: 205  VLLLDELTTFLDEKDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVI 250
            +LLLDE T+ LD + +  V  A+   + N    T + V HRL  ++ AD    +++G + 
Sbjct: 1193 ILLLDEATSALDAESERLVQDALDRVIVNR---TTVVVAHRLSTIKNADVIAIVKNGVIA 1252

[Close]

BLAST of CmoCh20G010600.1 vs. TAIR10
Match: AT2G36910.1 (AT2G36910.1 ATP binding cassette subfamily B1)

HSP 1 Score: 85.1 bits (209), Expect = 7.1e-17
Identity = 68/227 (29.96%), Postives = 116/227 (51.10%), Query Frame = 1


Query: 37   IEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNASTG 96
            +E +++ FS  +R    + I RD SLR  +G+   L+GP+GCGKS+++ ++      S+G
Sbjct: 1024 VELKHIDFSYPSRPD--IQIFRDLSLRARAGKTLALVGPSGCGKSSVISLIQRFYEPSSG 1083

Query: 97   AVYV-------------KKPKCFVFQNPDYQVVMPTVEADVAFG---LGKLNLTNEEVKS 156
             V +             +K    V Q P   +   T+  ++A+G     +  +      +
Sbjct: 1084 RVMIDGKDIRKYNLKAIRKHIAIVPQEPC--LFGTTIYENIAYGHECATEAEIIQAATLA 1143

Query: 157  RVLEALSSV--GMSSYL-QRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEKDQ 216
               + +S++  G  +Y+ +R VQ LSGGQKQR+AIA AL    +++LLDE T+ LD + +
Sbjct: 1144 SAHKFISALPEGYKTYVGERGVQ-LSGGQKQRIAIARALVRKAEIMLLDEATSALDAESE 1203

Query: 217  MGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVIMHG 245
              V +A+  +       T++ V HRL  +  A     ++DGKV   G
Sbjct: 1204 RSVQEALDQACSGR---TSIVVAHRLSTIRNAHVIAVIDDGKVAEQG 1242

[Close]

BLAST of CmoCh20G010600.1 vs. TAIR10
Match: AT1G02520.1 (AT1G02520.1 P-glycoprotein 11)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 72/248 (29.03%), Postives = 118/248 (47.58%), Query Frame = 1


Query: 25   SPSRANLTENIA--IEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNGCGKST 84
            S     + EN+   IE R+L+F+   R    + I RD  L I +G+   L+G +G GKST
Sbjct: 1018 SDETGTVLENVKGDIELRHLSFTYPARPD--IQIFRDLCLTIRAGKTVALVGESGSGKST 1077

Query: 85   LLKVLAGLLNASTGAV-------------YVKKPKCFVFQNPDYQVVMPTVEADVAFGLG 144
            ++ +L    +  +G +             ++++    V Q P   +   T+ A++A+G G
Sbjct: 1078 VISLLQRFYDPDSGHITLDGVELKKLQLKWLRQQMGLVGQEP--VLFNDTIRANIAYGKG 1137

Query: 145  KLNLTNEEVKSRVLEALSSVGMSSYLQRSVQT--------LSGGQKQRVAIAGALAEACK 204
                  E       E  ++    S +Q+   T        LSGGQKQRVAIA A+ +  K
Sbjct: 1138 SEEAATESEIIAAAELANAHKFISSIQQGYDTVVGERGIQLSGGQKQRVAIARAIVKEPK 1197

Query: 205  VLLLDELTTFLDEKDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVI 250
            +LLLDE T+ LD + +  V  A+   + N    T + V HRL  ++ AD    +++G + 
Sbjct: 1198 ILLLDEATSALDAESERVVQDALDRVMVNR---TTIVVAHRLSTIKNADVIAVVKNGVIA 1257

[Close]

BLAST of CmoCh20G010600.1 vs. TAIR10
Match: AT3G62150.1 (AT3G62150.1 P-glycoprotein 21)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 73/234 (31.20%), Postives = 119/234 (50.85%), Query Frame = 1


Query: 37   IEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNASTG 96
            IE R+++F   +R    V I +D  L I +G+   L+G +G GKST++ +L    +  +G
Sbjct: 1052 IELRHISFKYPSRPD--VQIFQDLCLSIRAGKTIALVGESGSGKSTVIALLQRFYDPDSG 1111

Query: 97   AV-------------YVKKPKCFVFQNPDYQVVMPTVEADVAFGLGKLNLTNEEVKSRVL 156
             +             ++++    V Q P   +   T+ A++A+G G  + T  E+ S   
Sbjct: 1112 QITLDGVEIKTLQLKWLRQQTGLVSQEP--VLFNETIRANIAYGKGG-DATETEIVSAA- 1171

Query: 157  EALSSVGMSSYLQRSVQT--------LSGGQKQRVAIAGALAEACKVLLLDELTTFLDEK 216
            E  ++ G  S LQ+   T        LSGGQKQRVAIA A+ +  KVLLLDE T+ LD +
Sbjct: 1172 ELSNAHGFISGLQQGYDTMVGERGVQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAE 1231

Query: 217  DQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVIMHGDVESV 250
             +  V  A+   + N    T + V HRL  ++ AD    +++G ++  G  E++
Sbjct: 1232 SERVVQDALDRVMVNR---TTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETL 1276

[Close]

BLAST of CmoCh20G010600.1 vs. NCBI nr
Match: gi|659121891|ref|XP_008460865.1| (PREDICTED: ABC transporter I family member 10, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 473.8 bits (1218), Expect = 2.0e-130
Identity = 240/267 (89.89%), Postives = 252/267 (94.38%), Query Frame = 1


Query: 1   MLLKSSIFNPVPTSPPLLPPLFSGSPSRANLTENIAIEGRNLTFSITTRQGKIVPILRDC 60
           M+LKSS FN V  SPPLL PLFS  PSR N+TENIAIEGRNL+FSITT+QG  VPILRDC
Sbjct: 1   MVLKSSSFNLVTPSPPLLSPLFSNPPSRINITENIAIEGRNLSFSITTKQGNFVPILRDC 60

Query: 61  SLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTV 120
           SLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLN ++GAVYVKKPKCFVFQNPDYQVVMPTV
Sbjct: 61  SLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNTTSGAVYVKKPKCFVFQNPDYQVVMPTV 120

Query: 121 EADVAFGLGKLNLTNEEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC 180
           EADVAFGLGKLNL+N+EVKSRVLEALS+VGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC
Sbjct: 121 EADVAFGLGKLNLSNDEVKSRVLEALSAVGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC 180

Query: 181 KVLLLDELTTFLDEKDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV 240
           KVLLLDELTTFLDE DQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV
Sbjct: 181 KVLLLDELTTFLDENDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV 240

Query: 241 IMHGDVESVQSFIKTKQSDYIKRIYYS 268
           +MHGDV S+QSFI+TKQSDYIKR Y S
Sbjct: 241 VMHGDVASIQSFIQTKQSDYIKRTYCS 267

[Close]

BLAST of CmoCh20G010600.1 vs. NCBI nr
Match: gi|449459220|ref|XP_004147344.1| (PREDICTED: ABC transporter I family member 10, chloroplastic [Cucumis sativus])

HSP 1 Score: 473.0 bits (1216), Expect = 3.4e-130
Identity = 240/267 (89.89%), Postives = 251/267 (94.01%), Query Frame = 1


Query: 1   MLLKSSIFNPVPTSPPLLPPLFSGSPSRANLTENIAIEGRNLTFSITTRQGKIVPILRDC 60
           M+LKSS FN V  SPPLL PLFS  PSR N TENIAIEGRNL FSITT+QGK VPILRDC
Sbjct: 1   MVLKSSSFNLVAPSPPLLSPLFSNPPSRINTTENIAIEGRNLNFSITTKQGKSVPILRDC 60

Query: 61  SLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTV 120
           SLRIPSG+FWMLLGPNGCGKSTLLKVLAGLLN ++GAVYVKKPKCFVFQNPDYQVVMPTV
Sbjct: 61  SLRIPSGEFWMLLGPNGCGKSTLLKVLAGLLNTTSGAVYVKKPKCFVFQNPDYQVVMPTV 120

Query: 121 EADVAFGLGKLNLTNEEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC 180
           EADVAFGLGKLNL N+EVKSRVLEALS+VGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC
Sbjct: 121 EADVAFGLGKLNLNNDEVKSRVLEALSAVGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC 180

Query: 181 KVLLLDELTTFLDEKDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV 240
           KVLLLDELTTFLDE DQ GVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV
Sbjct: 181 KVLLLDELTTFLDENDQTGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV 240

Query: 241 IMHGDVESVQSFIKTKQSDYIKRIYYS 268
           +MHGDV S+QSFI+TKQSDYIKRIY+S
Sbjct: 241 VMHGDVASIQSFIQTKQSDYIKRIYHS 267

[Close]

BLAST of CmoCh20G010600.1 vs. NCBI nr
Match: gi|823252465|ref|XP_012458843.1| (PREDICTED: ABC transporter I family member 10, chloroplastic isoform X1 [Gossypium raimondii])

HSP 1 Score: 389.0 bits (998), Expect = 6.5e-105
Identity = 193/247 (78.14%), Postives = 217/247 (87.85%), Query Frame = 1


Query: 18  LPPLFSGSPSRANLTENIAIEGRNLTFSITTRQGKIVPILRDCSLRIPSGQFWMLLGPNG 77
           L PL S S +R N TE++AIEGRN+ FS+ TRQG+IVPIL+DCS+RIPSGQ WMLLGPNG
Sbjct: 14  LSPLRSTSSTRDNATESVAIEGRNINFSVNTRQGRIVPILKDCSIRIPSGQLWMLLGPNG 73

Query: 78  CGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTVEADVAFGLGKLNLTNEE 137
           CGKSTLLK+LAGLL  + GA+YV++PK +VFQNPD+QVVMPTVEADVAFGLG+LNLTN E
Sbjct: 74  CGKSTLLKILAGLLTPTNGALYVRRPKSYVFQNPDHQVVMPTVEADVAFGLGRLNLTNSE 133

Query: 138 VKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDEKDQ 197
           V+SRV +AL +VGMS YLQR VQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDE DQ
Sbjct: 134 VRSRVSKALEAVGMSEYLQRPVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQ 193

Query: 198 MGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKVIMHGDVESVQSFIKTKQ 257
           MGVIKAV+N L  S +VTALWVTHRLEELEYADGA+YMEDG+VIMHGD  S+  FIK KQ
Sbjct: 194 MGVIKAVQNLLDISGEVTALWVTHRLEELEYADGAVYMEDGRVIMHGDAASINKFIKAKQ 253

Query: 258 SDYIKRI 265
           S YI RI
Sbjct: 254 SSYINRI 260

[Close]

BLAST of CmoCh20G010600.1 vs. NCBI nr
Match: gi|694362555|ref|XP_009360740.1| (PREDICTED: ABC transporter I family member 10, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 387.1 bits (993), Expect = 2.5e-104
Identity = 195/264 (73.86%), Postives = 226/264 (85.61%), Query Frame = 1


Query: 1   MLLKSSIFNPVPTSPPLLPPLFSGSPSRANLTENIAIEGRNLTFSITTRQGKIVPILRDC 60
           M+  S + +P   S P + PL+S   +R N+TE+IAIEGRNL++S+  RQGK +PILRDC
Sbjct: 1   MMNPSILMHP---SKPFVSPLYSTPRTRTNVTESIAIEGRNLSYSVAMRQGKTLPILRDC 60

Query: 61  SLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTV 120
           SLRIPSGQFWMLLGPNGCGKSTLLK+LAGLLN + G+V+VK+P+ FVFQNPD+QVVMPTV
Sbjct: 61  SLRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTIGSVHVKRPRSFVFQNPDHQVVMPTV 120

Query: 121 EADVAFGLGKLNLTNEEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC 180
           EADVAFGLGK NLT +EVKSRV +AL +V MS ++QRSVQTLSGGQKQRVAIAGALAEAC
Sbjct: 121 EADVAFGLGKFNLTPDEVKSRVSKALDAVSMSKFMQRSVQTLSGGQKQRVAIAGALAEAC 180

Query: 181 KVLLLDELTTFLDEKDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV 240
           KVLLLDELTTFLDE DQ+GVIKAVRN L +S DVTALWVTHRLEELEYADGA+YMEDG+V
Sbjct: 181 KVLLLDELTTFLDENDQIGVIKAVRNCLDSSGDVTALWVTHRLEELEYADGAVYMEDGRV 240

Query: 241 IMHGDVESVQSFIKTKQSDYIKRI 265
            MHG+   +  FIKT+QS YIK I
Sbjct: 241 KMHGNAADIMDFIKTRQSAYIKEI 261

[Close]

BLAST of CmoCh20G010600.1 vs. NCBI nr
Match: gi|645264380|ref|XP_008237649.1| (PREDICTED: ABC transporter I family member 10, chloroplastic isoform X1 [Prunus mume])

HSP 1 Score: 384.4 bits (986), Expect = 1.6e-103
Identity = 192/266 (72.18%), Postives = 225/266 (84.59%), Query Frame = 1


Query: 1   MLLKSSIFNPVPTSPPLLPPLFSGSPSRANLTENIAIEGRNLTFSITTRQGKIVPILRDC 60
           M+  S++ +P   S P + PL+S    R N TENIAIEGRNL+FS+ TRQGK +PIL+DC
Sbjct: 1   MMNPSNLIHP---SKPFVSPLYSTPRVRTNFTENIAIEGRNLSFSVGTRQGKTIPILKDC 60

Query: 61  SLRIPSGQFWMLLGPNGCGKSTLLKVLAGLLNASTGAVYVKKPKCFVFQNPDYQVVMPTV 120
           SL IPSGQFWMLLGPNGCGKSTLLK+LAGLLN + G V+VK+P+ FVFQNPD+QVVMPTV
Sbjct: 61  SLHIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTDGTVHVKRPRSFVFQNPDHQVVMPTV 120

Query: 121 EADVAFGLGKLNLTNEEVKSRVLEALSSVGMSSYLQRSVQTLSGGQKQRVAIAGALAEAC 180
           EADVAFGLGK NLT + VK RV +AL +V M +Y+QRSVQTLSGGQKQRVAIAGALAEAC
Sbjct: 121 EADVAFGLGKFNLTPDVVKCRVSKALDAVSMLNYMQRSVQTLSGGQKQRVAIAGALAEAC 180

Query: 181 KVLLLDELTTFLDEKDQMGVIKAVRNSLHNSEDVTALWVTHRLEELEYADGAIYMEDGKV 240
           KVLLLDELTTFLDE DQ+GVI+AVRNS+ +S +VTALWVTHRLEELEYADGA+YMEDG+V
Sbjct: 181 KVLLLDELTTFLDENDQIGVIRAVRNSVDSSREVTALWVTHRLEELEYADGAVYMEDGRV 240

Query: 241 IMHGDVESVQSFIKTKQSDYIKRIYY 267
           +MHG+   + +FI T+QS YIK I Y
Sbjct: 241 VMHGNARDIMNFITTRQSAYIKEINY 263

The following BLAST results are available for this feature:

BLAST of CmoCh20G010600.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AB10I_ARATH	4.2e-96	69.23	ABC transporter I family member 10, chloroplastic OS=Arabidopsis thaliana GN=ABC...	[more]
ECFA1_LACS1	9.9e-37	41.08	Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Lactobacillus sa...	[more]
ECFA1_CALS4	1.1e-35	39.26	Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Caldanaerobacter...	[more]
ECFA1_STRPB	4.6e-34	39.17	Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Streptococcus py...	[more]
ECFA1_LACBA	4.6e-34	39.73	Energy-coupling factor transporter ATP-binding protein EcfA1 OS=Lactobacillus br...	[more]

BLAST of CmoCh20G010600.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK85_CUCSA	2.4e-130	89.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336110 PE=4 SV=1	[more]
A0A0D2VUW5_GOSRA	4.5e-105	78.14	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G035000 PE=4 SV=1	[more]
A0A061DIV0_THECC	5.7e-100	76.69	ABC transporter family protein (Fragment) OS=Theobroma cacao GN=TCM_046684 PE=4 ...	[more]
W9QWU9_9ROSA	1.7e-99	75.29	ABC transporter I family member 10 OS=Morus notabilis GN=L484_020707 PE=4 SV=1	[more]
I1KBJ4_SOYBN	2.2e-99	73.41	Uncharacterized protein OS=Glycine max GN=GLYMA_06G153500 PE=4 SV=1	[more]

BLAST of CmoCh20G010600.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33460.1	2.4e-97	69.23	ABC transporter family protein	[more]
AT1G02530.1	1.4e-17	29.44	P-glycoprotein 12	[more]
AT2G36910.1	7.1e-17	29.96	ATP binding cassette subfamily B1	[more]
AT1G02520.1	1.2e-16	29.03	P-glycoprotein 11	[more]
AT3G62150.1	1.2e-16	31.20	P-glycoprotein 21	[more]

BLAST of CmoCh20G010600.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121891\|ref\|XP_008460865.1\|	2.0e-130	89.89	PREDICTED: ABC transporter I family member 10, chloroplastic isoform X1 [Cucumis...	[more]
gi\|449459220\|ref\|XP_004147344.1\|	3.4e-130	89.89	PREDICTED: ABC transporter I family member 10, chloroplastic [Cucumis sativus]	[more]
gi\|823252465\|ref\|XP_012458843.1\|	6.5e-105	78.14	PREDICTED: ABC transporter I family member 10, chloroplastic isoform X1 [Gossypi...	[more]
gi\|694362555\|ref\|XP_009360740.1\|	2.5e-104	73.86	PREDICTED: ABC transporter I family member 10, chloroplastic [Pyrus x bretschnei...	[more]
gi\|645264380\|ref\|XP_008237649.1\|	1.6e-103	72.18	PREDICTED: ABC transporter I family member 10, chloroplastic isoform X1 [Prunus ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003439	ABC_transporter-like
IPR003593	AAA+_ATPase
IPR017871	ABC_transporter_CS
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0016887	ATPase activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0042908	xenobiotic transport
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008559	xenobiotic-transporting ATPase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh20G010600	CmoCh20G010600	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh20G010600.1	CmoCh20G010600.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G010600.1.exon.6	CmoCh20G010600.1.exon.6	exon
CmoCh20G010600.1.exon.5	CmoCh20G010600.1.exon.5	exon
CmoCh20G010600.1.exon.4	CmoCh20G010600.1.exon.4	exon
CmoCh20G010600.1.exon.3	CmoCh20G010600.1.exon.3	exon
CmoCh20G010600.1.exon.2	CmoCh20G010600.1.exon.2	exon
CmoCh20G010600.1.exon.1	CmoCh20G010600.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G010600.1.five_prime_UTR.1	CmoCh20G010600.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G010600.1.CDS.1	CmoCh20G010600.1.CDS.1	CDS
CmoCh20G010600.1.CDS.2	CmoCh20G010600.1.CDS.2	CDS
CmoCh20G010600.1.CDS.3	CmoCh20G010600.1.CDS.3	CDS
CmoCh20G010600.1.CDS.4	CmoCh20G010600.1.CDS.4	CDS
CmoCh20G010600.1.CDS.5	CmoCh20G010600.1.CDS.5	CDS
CmoCh20G010600.1.CDS.6	CmoCh20G010600.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G010600.1.three_prime_UTR.1	CmoCh20G010600.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like	PFAM	PF00005	ABC_tran	coord: 57..189 score: 2.7
IPR003439	ABC transporter-like	PROFILE	PS50893	ABC_TRANSPORTER_2	coord: 37..262 score: 20
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 66..239 score: 1.2
IPR017871	ABC transporter, conserved site	PROSITE	PS00211	ABC_TRANSPORTER_1	coord: 162..176 scor
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 32..251 score: 7.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 30..253 score: 3.85
None	No IPR available	PANTHER	PTHR24220	FAMILY NOT NAMED	coord: 38..251 score: 2.4