CmoCh19G006680.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G006680.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Specific tissue protein
Location	Cmo_Chr19 : 7158494 .. 7160147 (+)
Sequence length	1443

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATAAAAGGTATATAGAGGAAGAGTTTGTGGTTTTCTTTTGTAGGGAACTCAACAAAGGAGGAACGAAGTGATATCAAAACATGAAGGGGCTTGTGTTCATCAATTTCTTCCTACTTATTTTGGTAATTAATTACCAATTCCATTCATCTTTCCCTACTCTAACCCCTTTTCGTATTGAATTTAAGTTATTTTCGTATACTCGAACATGTTTTGATTTCGGCTTTTTTGTGGTGAATTTAGCTTGCAAACACTATAGAATCAAGGTACGAGCCAGGAGATCATCACTGGAGAAATTTCATTGACGACAAGTCATTGCGTGAAAAAATTGGAGAATTTATCCAATCTTATCCAAACTCACTTCTTTCTGAGAAGGAAATGGAAGATTGCACCGGAACTTTGAAGCTTGAAGATGGAAAGCTATTCGTCAAAAATCTCGAGCCTCGACCACAAGCCACATTTGACTCGGATGTAGTCAAAACTAAACTTTTTTCTATAGACATAAAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCCGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCCGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCTGGATGTTGTCAAAACTAAACTTTTTTCTGAAAACATAAAACCCCGACCAAGTGCTTCATTTTATCCGGATGATATCAGATTAAAGGTTGTCAAAGATATAAAACCGCGACCAAGTGTCACGTTTTATCCAGATGATATCAAAACAAAGATTGCCAAAGATATAGAACCACAACCAAGTATTACATTCTATCCCGATGATATCAAAACAAAGATTGCCAAAGATATAGAACCACGACAAAGTGTCACATTTTATCCGGATGACATCAATTTAAAAGTTGGCAAAGATATAGAACCGCGACCAAGTGTCACGTTTTATCCCAATGATATCAAAACAAAGATTGTCAAAGATATAGAACCGCGCACAAGTGTCACATTTTATCCCGATGATATCAAAACAAATCTTGTTATCAAACCTATAGAGCCACGATCAAGTACCACATTTCATCGAGACAATCTCAAAGCCAAAGAGTTCTCGATCGATGCTCTCCGTGATGAAGCTGACGTACAAGTGGCACAAGCTTGA

mRNA sequence

ATGGAAGATAAAAGGTATATAGAGGAAGAGTTTGTGCTTGCAAACACTATAGAATCAAGGTACGAGCCAGGAGATCATCACTGGAGAAATTTCATTGACGACAAGTCATTGCGTGAAAAAATTGGAGAATTTATCCAATCTTATCCAAACTCACTTCTTTCTGAGAAGGAAATGGAAGATTGCACCGGAACTTTGAAGCTTGAAGATGGAAAGCTATTCGTCAAAAATCTCGAGCCTCGACCACAAGCCACATTTGACTCGGATGTAGTCAAAACTAAACTTTTTTCTATAGACATAAAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCCGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCCGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCTGGATGTTGTCAAAACTAAACTTTTTTCTGAAAACATAAAACCCCGACCAAGTGCTTCATTTTATCCGGATGATATCAGATTAAAGGTTGTCAAAGATATAAAACCGCGACCAAGTGTCACGTTTTATCCAGATGATATCAAAACAAAGATTGCCAAAGATATAGAACCACAACCAAGTATTACATTCTATCCCGATGATATCAAAACAAAGATTGCCAAAGATATAGAACCACGACAAAGTGTCACATTTTATCCGGATGACATCAATTTAAAAGTTGGCAAAGATATAGAACCGCGACCAAGTGTCACGTTTTATCCCAATGATATCAAAACAAAGATTGTCAAAGATATAGAACCGCGCACAAGTGTCACATTTTATCCCGATGATATCAAAACAAATCTTGTTATCAAACCTATAGAGCCACGATCAAGTACCACATTTCATCGAGACAATCTCAAAGCCAAAGAGTTCTCGATCGATGCTCTCCGTGATGAAGCTGACGTACAAGTGGCACAAGCTTGA

Coding sequence (CDS)

ATGGAAGATAAAAGGTATATAGAGGAAGAGTTTGTGCTTGCAAACACTATAGAATCAAGGTACGAGCCAGGAGATCATCACTGGAGAAATTTCATTGACGACAAGTCATTGCGTGAAAAAATTGGAGAATTTATCCAATCTTATCCAAACTCACTTCTTTCTGAGAAGGAAATGGAAGATTGCACCGGAACTTTGAAGCTTGAAGATGGAAAGCTATTCGTCAAAAATCTCGAGCCTCGACCACAAGCCACATTTGACTCGGATGTAGTCAAAACTAAACTTTTTTCTATAGACATAAAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCCGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCCGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCCGGATGTTGTCAAAACTAAACTTTTTTCTAAAGACATAGAACCCCGACCAAGTGCATCGTTTTATCCCGATGATACCAAGAAAAAGTTTATCGCTGAAGATATAGAACCACGACCAAACCTCTCATTTTATCTGGATGTTGTCAAAACTAAACTTTTTTCTGAAAACATAAAACCCCGACCAAGTGCTTCATTTTATCCGGATGATATCAGATTAAAGGTTGTCAAAGATATAAAACCGCGACCAAGTGTCACGTTTTATCCAGATGATATCAAAACAAAGATTGCCAAAGATATAGAACCACAACCAAGTATTACATTCTATCCCGATGATATCAAAACAAAGATTGCCAAAGATATAGAACCACGACAAAGTGTCACATTTTATCCGGATGACATCAATTTAAAAGTTGGCAAAGATATAGAACCGCGACCAAGTGTCACGTTTTATCCCAATGATATCAAAACAAAGATTGTCAAAGATATAGAACCGCGCACAAGTGTCACATTTTATCCCGATGATATCAAAACAAATCTTGTTATCAAACCTATAGAGCCACGATCAAGTACCACATTTCATCGAGACAATCTCAAAGCCAAAGAGTTCTCGATCGATGCTCTCCGTGATGAAGCTGACGTACAAGTGGCACAAGCTTGA

Homology

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BLAST of CmoCh19G006680.1 vs. Swiss-Prot
Match: OSS2_PEA (Organ-specific protein S2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.0e-07
Identity = 43/111 (38.74%), Postives = 55/111 (49.55%), Query Frame = 1


Query: 142 DIEPRPSASFYPDD---TKKKFIA-EDIEPRPNLSFYPD----VVKTKLFSKDIEPRPSA 201
           + EPRP AS Y D+    K+   A  + EPRPN S Y D      + K  S + EPRP+ 
Sbjct: 69  EFEPRPYASAYGDNEIHAKENMGAIGEFEPRPNASAYGDNEIHANENKGASGEFEPRPNI 128

Query: 202 SFYPDD----TKKKFIAEDIEPRPNLSFYPDVVKTKLFSKDIEPRPSASFY 241
           S Y D+     + K    + E RPN S Y D      F+ D EPRPS + Y
Sbjct: 129 SAYGDNEIHANENKGAIGEFETRPNASAYGDNEIGAEFTDDFEPRPSMTKY 179

[Close]

BLAST of CmoCh19G006680.1 vs. TrEMBL
Match: A0A0A0K3R4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262890 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 3.2e-109
Identity = 224/392 (57.14%), Postives = 277/392 (70.66%), Query Frame = 1


Query: 15  NTIESRYEPGDHHWRNFIDDKSLREKIGEFIQSYPNSLLSEKEMEDCTGTLKLEDGKLFV 74
           N IESRYEPG   W+N I+D SL               +  +E EDC     L++   F 
Sbjct: 19  NGIESRYEPGGQ-WKNVIEDDSLP--------------VVSQEKEDCFKYKSLKNENTFF 78

Query: 75  KNLEPRPQATF-DSDVVKTKLFSIDIKPRPSASFYP-DDTKKKFIAEDIEPRPNLSFYP- 134
            + +PRP  TF  +D  K + F+ DI+PRPSA+FYP D++K +F  +DIEPRP+ +FYP 
Sbjct: 79  NDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATFYPN 138

Query: 135 DVVKTKLFSKDIEPRPSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEP 194
           D  K KLF+KDIEPRPSA+FYP DDTK K   +DIEPRP+ +FYP D  K KLF+KDIEP
Sbjct: 139 DDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEP 198

Query: 195 RPSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYP-DDTKK 254
           RPSA+FYP DDTK K   +DIEPRP+ +FYP D  K KLF+KDIEPRPSA+FYP DDTK 
Sbjct: 199 RPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKN 258

Query: 255 KFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYP-DDTKKKFIAEDIEPRPNLS 314
           K   +DIEPRP+ +FYP D  K KLF+KDIEPRPSA+FYP DDTK K   +DIEPRP+ +
Sbjct: 259 KLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSAT 318

Query: 315 FY-LDVVKTKLFSENIKPRPSASFYP-DDIRLKV-VKDIKPRPSVTFYPDDIKTK--IAK 374
           FY  D  K KLF+++I+PRPSA+FYP DD + K+  KDI+PRPS TFYP+D   K    K
Sbjct: 319 FYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTNKKFFTK 378

Query: 375 DIEPQPSITFYP-DDIKTKI-AKDIEPRQSVT 390
           DIEP+PS+TFYP +D K K+  K+IE R S T
Sbjct: 379 DIEPRPSVTFYPNNDSKNKLFIKNIESRLSTT 395

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BLAST of CmoCh19G006680.1 vs. TrEMBL
Match: A0A0A0K5Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259390 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.6e-100
Identity = 198/352 (56.25%), Postives = 243/352 (69.03%), Query Frame = 1


Query: 12  VLANTIESRYEPGDHHWRNFIDDKSLREKIGEFIQSYPNSLLSEKEMEDCTGTLKLEDGK 71
           + A TIESR+EPGDHHWRN + DK                      M+DCT TLK+EDGK
Sbjct: 14  LFAGTIESRHEPGDHHWRNLMKDK----------------------MDDCTETLKVEDGK 73

Query: 72  LFVKNLEPRPQATFDSDVVKTKLFSIDIKPRPSASFYPDDTKKKFIAEDIEPRPNLSFYP 131
           LF+   EPRPQATF  DV +TK+ S D++ RPS SF PDDT+ K   E IE  P++ FYP
Sbjct: 74  LFI---EPRPQATFHGDV-QTKILSKDLEQRPSVSFRPDDTRTKLFVEHIELSPSIKFYP 133

Query: 132 DVVKTKLFSKDIEPRPSASFYPDDTKKKFIAEDIEPRPNLSFYPDVVKTKLFSKDIEPRP 191
             +K KL  KD +  P    Y +D K  F  +DIE +    FY D  K KL +KDIEPRP
Sbjct: 134 HEIKAKL-DKDTDVPPRTLIYLNDIKSNFFVKDIERQLRARFYRDDNKRKL-AKDIEPRP 193

Query: 192 SASFYPDDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYPDD-TKKKFI 251
           + SFYPDDTK K  AED+EPRPN+SFYP D  KTKLF++D+EPRP+ SFYPDD TK K  
Sbjct: 194 NVSFYPDDTKTKLFAEDLEPRPNVSFYPDDETKTKLFAEDVEPRPNVSFYPDDETKTKLF 253

Query: 252 AEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYPDD-TKKKFIAEDIEPRPNLSFYL 311
           AED+EPRPN+SFYP D  KTKLF +D+EPRP+ SFYPDD TK K  AED+EPRPN  FY 
Sbjct: 254 AEDVEPRPNVSFYPDDDTKTKLFVEDVEPRPNVSFYPDDETKTKLFAEDVEPRPNSFFYP 313

Query: 312 -DVVKTKLFSENIKPRPSASFYP-DDIRLKVV-KDIKPRPSVTFYPDDIKTK 357
            D +KTKL  + I+PRP+ SFYP DD + K++ +DI+PRP+V+FYPD++K K
Sbjct: 314 DDDIKTKLLVQEIEPRPNVSFYPDDDTKTKLLAEDIEPRPNVSFYPDNLKAK 337

[Close]

BLAST of CmoCh19G006680.1 vs. TrEMBL
Match: A0A0A0K958_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262900 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.9e-61
Identity = 142/270 (52.59%), Postives = 173/270 (64.07%), Query Frame = 1


Query: 15  NTIESRYEPGDHHWRNFIDDKSLREKIGEFIQSYPNSLLSEKEMEDCTGTLKLEDGKLFV 74
           N IESRYEPG   W+N I+D SL               +  +E EDC     L++   F 
Sbjct: 19  NGIESRYEPGGQ-WKNVIEDDSL--------------PVVSQEKEDCFKYKSLKNENTFF 78

Query: 75  KNLEPRPQATFDSDVVKTKLFSIDIKPRPSASFYPDD-TKKKFIAEDIEPRPNLSFYP-D 134
                                  DIKPRPS +FYP+D +K KF  +DIEPRP+L+FYP D
Sbjct: 79  N----------------------DIKPRPSITFYPNDGSKDKFFIKDIEPRPSLTFYPND 138

Query: 135 VVKTKLFSKDIEPRPSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPR 194
             K KLF+KDIEPRPS +FYP DDTK K   +DIEPRP+L+FYP D  K KLF+KDIEPR
Sbjct: 139 DTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKDIEPRPSLTFYPNDDTKNKLFTKDIEPR 198

Query: 195 PSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYP-DDTKKK 254
           PS +FYP DDTK K   +DIEPRP+L+FYP D  K K F KDIEPRPS +FYP D++K K
Sbjct: 199 PSLTFYPNDDTKNKLFTKDIEPRPSLTFYPNDESKDKFFIKDIEPRPSTTFYPNDESKDK 251

Query: 255 FIAEDIEPRPNLSFYP-DVVKTKLFSKDIE 277
              +DIEPRP+L+FYP +  K KLF+K+IE
Sbjct: 259 VFIKDIEPRPSLTFYPSNENKDKLFTKNIE 251

[Close]

BLAST of CmoCh19G006680.1 vs. TrEMBL
Match: A0A103YKI8_CYNCS (Organ specific protein OS=Cynara cardunculus var. scolymus GN=Ccrd_010870 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.3e-46
Identity = 130/401 (32.42%), Postives = 199/401 (49.63%), Query Frame = 1


Query: 98  DIKPRPSASFYPDDTKKKFIAEDIEPRPNLSFYPD---VVKTKLFSKDIEPRPSASFYPD 157
           + K RP  S   +D  +   + D EPRPN+S Y D   +   K+F +D EPRP+ S Y +
Sbjct: 67  EFKTRPDISVDDNDVNQDSSSNDFEPRPNISVYDDGASLKDKKMFEEDFEPRPNISAYDN 126

Query: 158 DT---KKKFIAEDIEPRPNLSFYPDVV---KTKLFSKDIEPRPSASFYPDDT---KKKFI 217
           D    ++K   E+ EPRPN+S Y +     + K F +D EPRP+ S Y +D    +KK  
Sbjct: 127 DASSKRRKTFDEEFEPRPNISAYDNDAGSERKKTFKEDFEPRPNISAYDNDAGSERKKTF 186

Query: 218 AEDIEPRPNLSFYPDVVK---TKLFSKDIEPRPSASFYPDDTK---KKFIAEDIEPRPNL 277
            E  EPRPN+S Y + V    TK F K+ EPRP+ S Y +D     KK   E+ EPRPN+
Sbjct: 187 DEKFEPRPNISAYDNDVSLKGTKTFDKEFEPRPNVSVYDNDVDLKGKKTSNEEFEPRPNI 246

Query: 278 SFYPDVV---KTKLFSKDIEPRPSASFYPDDT---KKKFIAEDIEPRPNLSFYLDVVK-- 337
           S Y + V     K F ++ EPRPS + Y D      KK   +D EPRPN++  +D  +  
Sbjct: 247 SVYDNGVGLKGKKTFDEEFEPRPSVTAYDDGVGVKGKKTHDKDFEPRPNIATTVDARQDP 306

Query: 338 -----TKLFSENIKPRPSASFYPDDIRLKVVKDIKPRPSVTFYPDDIKT-KIAKDIEPQP 397
                T      +K R          R    ++ + RP+++   +++      KD EP+P
Sbjct: 307 FVRRATSTTPLPMKKRHCHVSEKATDRKSFHEEFEQRPNISVNDNEVSPGDNNKDFEPRP 366

Query: 398 SITFYPDDIKTKIAKDIEPRQSVTFYPDDINLKVGK----DIEPRPSVTFYPNDIKTKIV 457
           ++  Y D I  K  K  EP+  ++   +   +K  K    + EPRP+ + Y +  K    
Sbjct: 367 NVLVYDDSISLKGKKTFEPKSDISVDYNSAYIKSKKTFEEEFEPRPNSSVYDDGGKKTFD 426

Query: 458 KDIEPRTSVTFYPDDIKTNLVIKPIEPRSSTTFHRDNLKAK 463
           ++ EPR + + Y D  K     +  EPR +++ + +  + K
Sbjct: 427 EEFEPRPNSSVYDDGGKKTF-DEEFEPRPNSSVYDEGFEPK 466

[Close]

BLAST of CmoCh19G006680.1 vs. TrEMBL
Match: A0A061DZ48_THECC (Specific tissue protein 1, putative OS=Theobroma cacao GN=TCM_006907 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.5e-45
Identity = 137/339 (40.41%), Postives = 180/339 (53.10%), Query Frame = 1


Query: 12  VLANTIESRYEPGDHHWRNFIDDKSLREKIGEF--IQSYPNSLLSEK-EMEDCTGTLKLE 71
           + ANTI +R +PG++ WR  + D+ + E I     I +  +S   EK    D   + + +
Sbjct: 16  LFANTIAARTDPGEY-WRAMMKDEPMPEAIEGLLRIDAAASSFSDEKPNCHDADQSFEPQ 75

Query: 72  DGKLFVKNLEPRPQAT-FDSDV--VKTKLFSIDIKPRPSASFYPDDTKKKFIAEDIEPRP 131
             K FVK+ EP   AT +D+D+   + K F  D  PR +        +K   A D EPRP
Sbjct: 76  KEKTFVKDFEPGHGATAYDNDIKPAEEKSFVKDFNPRSTG-------EKSSFANDFEPRP 135

Query: 132 NLSFYPDVV-----KTKLFSKDIEPRPSASFYPDDT---KKKFIAEDIEPRPNLSFYPDV 191
           + + + D V     K   F+K  EP+PSA+ Y DD    +K  IA D EPRP+++ Y D 
Sbjct: 136 SATAHTDDVGLKEKKLSSFAKSFEPKPSATAYTDDVGSKEKLSIANDFEPRPSVTTYTDN 195

Query: 192 VKTK----LFSKDIEPRPSASFYPDDT----KKKFIAEDIEPRPNLSFYPDVVKTK---- 251
           V  K     F  D EPRPSA+ Y DD     KK   A D EPRP ++ Y D V  K    
Sbjct: 196 VDLKEEKLAFVNDFEPRPSATAYTDDVGLREKKLSFANDFEPRPGVTAYTDDVGLKENKL 255

Query: 252 LFSKDIEPRPSASFYPDDT---KKKFIAEDIEPRPNLSFYPDVV---KTKL-FSKDIEPR 311
            F+KD EPRPS + Y DD    +KK  A D EPRP++S Y D V   K KL F+ D EPR
Sbjct: 256 AFAKDFEPRPSVTAYVDDVGLKEKKLFANDFEPRPSVSAYTDDVGLKKKKLAFANDFEPR 315

Query: 312 PSASFYPDDT--KKKFI--AEDIEPRPNLSFYLDVVKTK 314
           PS S Y DD   KKK +  A D +PRP++S Y D V  K
Sbjct: 316 PSVSAYTDDVGLKKKELSFANDFKPRPSVSAYTDNVDLK 346

[Close]

BLAST of CmoCh19G006680.1 vs. NCBI nr
Match: gi|778726206|ref|XP_011659073.1| (PREDICTED: proteoglycan 4-like isoform X1 [Cucumis sativus])

HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112
Identity = 231/399 (57.89%), Postives = 284/399 (71.18%), Query Frame = 1


Query: 15  NTIESRYEPGDHHWRNFIDDKSLREKIGEFIQSYPNSLLSEKEMEDCTGTLKLEDGKLFV 74
           N IESRYEPG   W+N I+D SL               +  +E EDC     L++   F 
Sbjct: 19  NGIESRYEPGGQ-WKNVIEDDSLP--------------VVSQEKEDCFKYKSLKNENTFF 78

Query: 75  KNLEPRPQATF-DSDVVKTKLFSIDIKPRPSASFYP-DDTKKKFIAEDIEPRPNLSFYP- 134
            + +PRP  TF  +D  K + F+ DI+PRPSA+FYP D++K +F  +DIEPRP+ +FYP 
Sbjct: 79  NDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATFYPN 138

Query: 135 DVVKTKLFSKDIEPRPSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEP 194
           D  K KLF+KDIEPRPSA+FYP DDTK K   +DIEPRP+ +FYP D  K KLF+KDIEP
Sbjct: 139 DDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEP 198

Query: 195 RPSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYP-DDTKK 254
           RPSA+FYP DDTK K   +DIEPRP+ +FYP D  K KLF+KDIEPRPSA+FYP DDTK 
Sbjct: 199 RPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKN 258

Query: 255 KFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYP-DDTKKKFIAEDIEPRPNLS 314
           K   +DIEPRP+ +FYP D  K KLF+KDIEPRPSA+FYP DDTK K   +DIEPRP+ +
Sbjct: 259 KLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSAT 318

Query: 315 FY-LDVVKTKLFSENIKPRPSASFYP-DDIRLKV-VKDIKPRPSVTFYP-DDIKTK-IAK 374
           FY  D  K KLF+++I+PRPSA+FYP DD + K+  KDI+PRPS TFYP D+ K K   K
Sbjct: 319 FYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDESKDKFFIK 378

Query: 375 DIEPQPSITFYP-DDIKTKI-AKDIEPRQSVTFYPDDIN 397
           DIEP+PS TFYP D+ K K+  KDIEPR S+TFYP + N
Sbjct: 379 DIEPRPSTTFYPNDESKDKVFIKDIEPRPSLTFYPSNEN 402

[Close]

BLAST of CmoCh19G006680.1 vs. NCBI nr
Match: gi|700189107|gb|KGN44340.1| (hypothetical protein Csa_7G262890 [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 4.6e-109
Identity = 224/392 (57.14%), Postives = 277/392 (70.66%), Query Frame = 1


Query: 15  NTIESRYEPGDHHWRNFIDDKSLREKIGEFIQSYPNSLLSEKEMEDCTGTLKLEDGKLFV 74
           N IESRYEPG   W+N I+D SL               +  +E EDC     L++   F 
Sbjct: 19  NGIESRYEPGGQ-WKNVIEDDSLP--------------VVSQEKEDCFKYKSLKNENTFF 78

Query: 75  KNLEPRPQATF-DSDVVKTKLFSIDIKPRPSASFYP-DDTKKKFIAEDIEPRPNLSFYP- 134
            + +PRP  TF  +D  K + F+ DI+PRPSA+FYP D++K +F  +DIEPRP+ +FYP 
Sbjct: 79  NDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATFYPN 138

Query: 135 DVVKTKLFSKDIEPRPSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEP 194
           D  K KLF+KDIEPRPSA+FYP DDTK K   +DIEPRP+ +FYP D  K KLF+KDIEP
Sbjct: 139 DDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEP 198

Query: 195 RPSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYP-DDTKK 254
           RPSA+FYP DDTK K   +DIEPRP+ +FYP D  K KLF+KDIEPRPSA+FYP DDTK 
Sbjct: 199 RPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKN 258

Query: 255 KFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYP-DDTKKKFIAEDIEPRPNLS 314
           K   +DIEPRP+ +FYP D  K KLF+KDIEPRPSA+FYP DDTK K   +DIEPRP+ +
Sbjct: 259 KLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSAT 318

Query: 315 FY-LDVVKTKLFSENIKPRPSASFYP-DDIRLKV-VKDIKPRPSVTFYPDDIKTK--IAK 374
           FY  D  K KLF+++I+PRPSA+FYP DD + K+  KDI+PRPS TFYP+D   K    K
Sbjct: 319 FYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTNKKFFTK 378

Query: 375 DIEPQPSITFYP-DDIKTKI-AKDIEPRQSVT 390
           DIEP+PS+TFYP +D K K+  K+IE R S T
Sbjct: 379 DIEPRPSVTFYPNNDSKNKLFIKNIESRLSTT 395

[Close]

BLAST of CmoCh19G006680.1 vs. NCBI nr
Match: gi|778726210|ref|XP_011659075.1| (PREDICTED: proteoglycan 4-like isoform X2 [Cucumis sativus])

HSP 1 Score: 396.0 bits (1016), Expect = 9.6e-107
Identity = 221/386 (57.25%), Postives = 276/386 (71.50%), Query Frame = 1


Query: 15  NTIESRYEPGDHHWRNFIDDKSLREKIGEFIQSYPNSLLSEKEMEDCTGTLKLEDGKLFV 74
           N IESRYEPG   W+N I+D SL               +  +E EDC     L++   F 
Sbjct: 19  NGIESRYEPGGQ-WKNVIEDDSLP--------------VVSQEKEDCFKYKSLKNENTFF 78

Query: 75  KNLEPRPQATF-DSDVVKTKLFSIDIKPRPSASFYP-DDTKKKFIAEDIEPRPNLSFYP- 134
            + +PRP  TF  +D  K + F+ DI+PRPSA+FYP D++K +F  +DIEPRP+ +FYP 
Sbjct: 79  NDTKPRPSITFYPNDESKDRFFTKDIEPRPSATFYPNDESKDRFFTKDIEPRPSATFYPN 138

Query: 135 DVVKTKLFSKDIEPRPSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEP 194
           D  K KLF+KDIEPRPSA+FYP DDTK K   +DIEPRP+ +FYP D  K KLF+KDIEP
Sbjct: 139 DDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEP 198

Query: 195 RPSASFYP-DDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYP-DDTKK 254
           RPSA+FYP DDTK K   +DIEPRP+ +FYP D  K KLF+KDIEPRPSA+FYP DDTK 
Sbjct: 199 RPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKN 258

Query: 255 KFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYP-DDTKKKFIAEDIEPRPNLS 314
           K   +DIEPRP+ +FYP D  K KLF+KDIEPRPSA+FYP DDTK K   +DIEPRP+ +
Sbjct: 259 KLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSAT 318

Query: 315 FY-LDVVKTKLFSENIKPRPSASFYP-DDIRLKV-VKDIKPRPSVTFYP-DDIKTKI-AK 374
           FY  D  K KLF+++I+PRPSA+FYP DD + K+  KDI+PRPS TFYP D+ K K+  K
Sbjct: 319 FYPNDDTKNKLFTKDIEPRPSATFYPNDDTKNKLFTKDIEPRPSATFYPNDESKDKVFIK 378

Query: 375 DIEPQPSITFYP-DDIKTKI-AKDIE 384
           DIEP+PS+TFYP ++ K K+  K+IE
Sbjct: 379 DIEPRPSLTFYPSNENKDKLFTKNIE 389

[Close]

BLAST of CmoCh19G006680.1 vs. NCBI nr
Match: gi|778726203|ref|XP_004151481.2| (PREDICTED: uncharacterized protein LOC101212185 [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 2.3e-100
Identity = 198/352 (56.25%), Postives = 243/352 (69.03%), Query Frame = 1


Query: 12  VLANTIESRYEPGDHHWRNFIDDKSLREKIGEFIQSYPNSLLSEKEMEDCTGTLKLEDGK 71
           + A TIESR+EPGDHHWRN + DK                      M+DCT TLK+EDGK
Sbjct: 14  LFAGTIESRHEPGDHHWRNLMKDK----------------------MDDCTETLKVEDGK 73

Query: 72  LFVKNLEPRPQATFDSDVVKTKLFSIDIKPRPSASFYPDDTKKKFIAEDIEPRPNLSFYP 131
           LF+   EPRPQATF  DV +TK+ S D++ RPS SF PDDT+ K   E IE  P++ FYP
Sbjct: 74  LFI---EPRPQATFHGDV-QTKILSKDLEQRPSVSFRPDDTRTKLFVEHIELSPSIKFYP 133

Query: 132 DVVKTKLFSKDIEPRPSASFYPDDTKKKFIAEDIEPRPNLSFYPDVVKTKLFSKDIEPRP 191
             +K KL  KD +  P    Y +D K  F  +DIE +    FY D  K KL +KDIEPRP
Sbjct: 134 HEIKAKL-DKDTDVPPRTLIYLNDIKSNFFVKDIERQLRARFYRDDNKRKL-AKDIEPRP 193

Query: 192 SASFYPDDTKKKFIAEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYPDD-TKKKFI 251
           + SFYPDDTK K  AED+EPRPN+SFYP D  KTKLF++D+EPRP+ SFYPDD TK K  
Sbjct: 194 NVSFYPDDTKTKLFAEDLEPRPNVSFYPDDETKTKLFAEDVEPRPNVSFYPDDETKTKLF 253

Query: 252 AEDIEPRPNLSFYP-DVVKTKLFSKDIEPRPSASFYPDD-TKKKFIAEDIEPRPNLSFYL 311
           AED+EPRPN+SFYP D  KTKLF +D+EPRP+ SFYPDD TK K  AED+EPRPN  FY 
Sbjct: 254 AEDVEPRPNVSFYPDDDTKTKLFVEDVEPRPNVSFYPDDETKTKLFAEDVEPRPNSFFYP 313

Query: 312 -DVVKTKLFSENIKPRPSASFYP-DDIRLKVV-KDIKPRPSVTFYPDDIKTK 357
            D +KTKL  + I+PRP+ SFYP DD + K++ +DI+PRP+V+FYPD++K K
Sbjct: 314 DDDIKTKLLVQEIEPRPNVSFYPDDDTKTKLLAEDIEPRPNVSFYPDNLKAK 337

[Close]

BLAST of CmoCh19G006680.1 vs. NCBI nr
Match: gi|1021032744|gb|KZM90528.1| (hypothetical protein DCAR_022107 [Daucus carota subsp. sativus])

HSP 1 Score: 268.5 bits (685), Expect = 2.3e-68
Identity = 174/395 (44.05%), Postives = 232/395 (58.73%), Query Frame = 1


Query: 91  KTKLFSIDIKPRPSASFYPDDTKKK---FIAEDIEPRPNLSFYPDVVKTK---LFSKDIE 150
           K++L + DI+PRP+ S Y DD K K      +DIEPRPN+S Y    K +    F KDIE
Sbjct: 81  KSRLSARDIEPRPNISAYHDDEKLKKGNAHVDDIEPRPNISSYRGDKKLRDNESFDKDIE 140

Query: 151 PRPSASFYPDDTKKK---FIAEDIEPRPNLSFYPDVVKTK---LFSKDIEPRPSASFYPD 210
           PRP+ S Y DD K K      +DIEPRPN+S Y D  K +    F KDIEPRP+ S Y D
Sbjct: 141 PRPNISAYHDDEKLKKGNSYRDDIEPRPNISSYHDDEKLRNDESFDKDIEPRPNISAYHD 200

Query: 211 DTKKK---FIAEDIEPRPNLSFYPDVVK---TKLFSKDIEPRPSASFYPDD---TKKKFI 270
           D K K      +DIEPRPN+S Y D  K    + F KDIEPRP+ S Y DD    K    
Sbjct: 201 DEKLKKGNSYMDDIEPRPNISSYHDDEKLRNNESFDKDIEPRPNISSYHDDEKLQKSDSF 260

Query: 271 AEDIEPRPNLSFYPDVVKTK---LFSKDIEPRPSASFYPDD---TKKKFIAEDIEPRPNL 330
           ++DIEPRPN+S Y D  K +    F K+IEPRP+ S Y D    T+ +   +DIEPRPN+
Sbjct: 261 SKDIEPRPNISSYHDEEKLRNDESFDKNIEPRPNISAYHDGEKLTENESFDKDIEPRPNI 320

Query: 331 SFYLD---VVKTKLFSENIKPRPSASFYPDDIRLKVV----KDIKPRPSVTFYPDDIKTK 390
           S Y D   + K+  FS++I+PRP+ S Y DD +L+      KDI+ RP+++ Y DD K K
Sbjct: 321 SSYHDDEKLKKSDSFSKDIEPRPNISSYHDDEKLRDTESFDKDIEARPNISSYHDDEKLK 380

Query: 391 ----IAKDIEPQPSITFYPDDIK----TKIAKDIEPRQSVTFYPDDINLK----VGKDIE 436
                +KDIEP+P+I+ Y  D K        +DIEPR +++ Y DD  LK      KDIE
Sbjct: 381 KNDSFSKDIEPRPNISAYQGDKKLTENESFIRDIEPRPNISSYHDDEKLKKTDAFTKDIE 440

The following BLAST results are available for this feature:

BLAST of CmoCh19G006680.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
OSS2_PEA	1.0e-07	38.74	Organ-specific protein S2 OS=Pisum sativum PE=2 SV=1	[more]

BLAST of CmoCh19G006680.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3R4_CUCSA	3.2e-109	57.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262890 PE=4 SV=1	[more]
A0A0A0K5Y0_CUCSA	1.6e-100	56.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259390 PE=4 SV=1	[more]
A0A0A0K958_CUCSA	1.9e-61	52.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G262900 PE=4 SV=1	[more]
A0A103YKI8_CYNCS	2.3e-46	32.42	Organ specific protein OS=Cynara cardunculus var. scolymus GN=Ccrd_010870 PE=4 S...	[more]
A0A061DZ48_THECC	1.5e-45	40.41	Specific tissue protein 1, putative OS=Theobroma cacao GN=TCM_006907 PE=4 SV=1	[more]

BLAST of CmoCh19G006680.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh19G006680.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778726206\|ref\|XP_011659073.1\|	1.2e-112	57.89	PREDICTED: proteoglycan 4-like isoform X1 [Cucumis sativus]	[more]
gi\|700189107\|gb\|KGN44340.1\|	4.6e-109	57.14	hypothetical protein Csa_7G262890 [Cucumis sativus]	[more]
gi\|778726210\|ref\|XP_011659075.1\|	9.6e-107	57.25	PREDICTED: proteoglycan 4-like isoform X2 [Cucumis sativus]	[more]
gi\|778726203\|ref\|XP_004151481.2\|	2.3e-100	56.25	PREDICTED: uncharacterized protein LOC101212185 [Cucumis sativus]	[more]
gi\|1021032744\|gb\|KZM90528.1\|	2.3e-68	44.05	hypothetical protein DCAR_022107 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR024489	Organ_specific_prot

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh19G006680	CmoCh19G006680	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh19G006680.1	CmoCh19G006680.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G006680.1.exon.1	CmoCh19G006680.1.exon.1	exon
CmoCh19G006680.1.exon.2	CmoCh19G006680.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh19G006680.1.CDS.1	CmoCh19G006680.1.CDS.1	CDS
CmoCh19G006680.1.CDS.2	CmoCh19G006680.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024489	Organ specific protein	PFAM	PF10950	DUF2775	coord: 290..349 score: 2.1E-5coord: 23..130 score: 2.9E-11coord: 352..412 score: 6.7E-8coord: 226..284 score: 3.0E-8coord: 201..262 score: 1.0E-7coord: 269..328 score: 5.5E-6coord: 181..240 score: 3.4E-8coord: 245..306 score: 7.0E-8coord: 135..174 score: 6.2E-5coord: 158..218 score: 1.
None	No IPR available	PANTHER	PTHR33731	FAMILY NOT NAMED	coord: 13..265 score: 9.6
None	No IPR available	PANTHER	PTHR33731:SF1	SUBFAMILY NOT NAMED	coord: 13..265 score: 9.6