CmoCh12G007750.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G007750.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	NADH-ubiquinone oxidoreductase chain 3 (1.6.5.3)
Location	Cmo_Chr12 : 6188100 .. 6188456 (+)
Sequence length	336

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTTTTCTAGTTTCTTTGATCCCACTCGGTCTTCATTTTCCATTTGCTTCTAATAGTTCAACCTATCTAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAAAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTCACCTTTTCTTTTCCTTAGGCAGTACCTCTCAACAAGATTGATCTGTTTGGATCTTGGTCCATGATGGCCTTTTTATTTATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTTGGATCGGGAGTAA

mRNA sequence

ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTTTTCTAGTTTCTTTGATCCCACTCGGTCTTCATTTTCCATTTGCTTCTAATAGTTCAACCTATCTAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAAAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGCAGTACCTCTCAACAAGATTGATCTGTTTGGATCTTGGTCCATGATGGCCTTTTTATTTATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTTGGATCGGGAGTAA

Coding sequence (CDS)

ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTTTTCTAGTTTCTTTGATCCCACTCGGTCTTCATTTTCCATTTGCTTCTAATAGTTCAACCTATCTAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAAAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGCAGTACCTCTCAACAAGATTGATCTGTTTGGATCTTGGTCCATGATGGCCTTTTTATTTATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTTGGATCGGGAGTAA

Homology

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BLAST of CmoCh12G007750.1 vs. Swiss-Prot
Match: NU3M_PANGI (NADH-ubiquinone oxidoreductase chain 3 OS=Panax ginseng GN=ND3 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 8.8e-48
Identity = 99/118 (83.90%), Postives = 102/118 (86.44%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLG+ FPFASNSSTY +KLSAYECGFDPSGDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPDKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFII DPE       AVP NKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Sbjct: 61  YLVSILFIIPDPEVTFSFPWAVPPNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. Swiss-Prot
Match: NU3M_PINSY (NADH-ubiquinone oxidoreductase chain 3 OS=Pinus sylvestris GN=NAD3 PE=2 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-44
Identity = 94/118 (79.66%), Postives = 97/118 (82.20%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LV LIPLG+ F FASN STY EKLSAYECGFDP GDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISLLVCLIPLGVPFLFASNGSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFII D       P AV LNKIDLFG WSMM FL ILTIGFLYEWK+GALD E
Sbjct: 61  YLVSILFIIFDLEVTFFFPWAVSLNKIDLFGFWSMMVFLLILTIGFLYEWKKGALDWE 118

[Close]

BLAST of CmoCh12G007750.1 vs. Swiss-Prot
Match: NU3M_HELAN (NADH-ubiquinone oxidoreductase chain 3 OS=Helianthus annuus GN=ND3 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-44
Identity = 96/118 (81.36%), Postives = 98/118 (83.05%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           M EFAPICIYLVIS LVSLI LG+ F FASNSSTY EKLSAYECGFDP GDA+SRFDIRF
Sbjct: 1   MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFII D       P AV LNKIDLFG WSMMAFL ILTIGFLYEWKRGALD E
Sbjct: 61  YLVSILFIIFDLEVTFFFPWAVSLNKIDLFGFWSMMAFLLILTIGFLYEWKRGALDWE 118

[Close]

BLAST of CmoCh12G007750.1 vs. Swiss-Prot
Match: NU3M_WHEAT (NADH-ubiquinone oxidoreductase chain 3 OS=Triticum aestivum GN=ND3 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-44
Identity = 96/118 (81.36%), Postives = 98/118 (83.05%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           M EFAPICIYLVIS LVSLI LG+ F FASNSSTY EKLSAYECGFDP GDA+SRFDIRF
Sbjct: 1   MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFII D       P AV LNKIDLFG WSMMAFL ILTIGFLYEWKRGALD E
Sbjct: 61  YLVSILFIIFDLEVTFFFPWAVSLNKIDLFGFWSMMAFLLILTIGFLYEWKRGALDWE 118

[Close]

BLAST of CmoCh12G007750.1 vs. Swiss-Prot
Match: NU3M_SOLTU (NADH-ubiquinone oxidoreductase chain 3 OS=Solanum tuberosum GN=ND3 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.7e-44
Identity = 96/118 (81.36%), Postives = 98/118 (83.05%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLGL F F+SNSSTY EK SAYECG DPSGDA+SR DIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFLFSSNSSTYPEKSSAYECGLDPSGDARSRVDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFII DPE       AVP NKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Sbjct: 61  YLVSILFIIPDPEVTFSFPWAVPPNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. TrEMBL
Match: G3EU38_CUCME (NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis melo subsp. melo GN=nad3 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 5.6e-49
Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLGL FPFASNS+TY EKLSAYECGFDPSGDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFASNSATYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL ILTIGFLYEWKRGA DRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. TrEMBL
Match: G3EIY2_CUCSA (NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis sativus GN=nad3 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 5.6e-49
Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLGL FPF+SNSSTY EKLSAYECGFDPSGDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL ILTIGFLYEWKRGA DRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. TrEMBL
Match: A0A142BZ04_ZIZJJ (NADH-ubiquinone oxidoreductase chain 3 OS=Ziziphus jujuba GN=nad3 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-47
Identity = 102/118 (86.44%), Postives = 104/118 (88.14%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLG+ FPFASNSSTY EKLSAYECGFDPSGDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISSLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. TrEMBL
Match: Q5U6C6_BETVU (NADH-ubiquinone oxidoreductase chain 3 OS=Beta vulgaris subsp. vulgaris GN=nad3 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.1e-47
Identity = 100/118 (84.75%), Postives = 104/118 (88.14%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLG+ FPF+SN+STY EKLSAYECGFDP GDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISLLVSLIPLGVPFPFSSNTSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKID FGSWSMMAFL ILTIGFLYEWKRGA DRE
Sbjct: 61  YLVSILFIILDPEVTFFFPWAVPLNKIDPFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. TrEMBL
Match: J7FAB9_SILVU (NADH-ubiquinone oxidoreductase chain 3 OS=Silene vulgaris GN=nad3 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.8e-47
Identity = 100/118 (84.75%), Postives = 103/118 (87.29%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           M EFAPICIYLVIS LVSLIPLGL FPF+SN+STY EKLSAYECGFDP GDA+SRFDIRF
Sbjct: 1   MLEFAPICIYLVISLLVSLIPLGLPFPFSSNTSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKID FG WSMMAFL ILTIGFLYEWKRGALDRE
Sbjct: 61  YLVSILFIILDPEVTFFFPWAVPLNKIDPFGFWSMMAFLLILTIGFLYEWKRGALDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. TAIR10
Match: AT2G07751.1 (AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-47
Identity = 98/118 (83.05%), Postives = 101/118 (85.59%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPI IYLVIS LVSLI LG+ FPFASNSSTY EKLSAYECGFDPSGDA+SRFDIRF
Sbjct: 1   MSEFAPISIYLVISLLVSLILLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILF+I D       P AVP NKIDLFG WSMMAFLFILTIGFLYEWKRGA DRE
Sbjct: 61  YLVSILFLIPDLEVTFFFPWAVPPNKIDLFGFWSMMAFLFILTIGFLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. TAIR10
Match: ATMG00990.1 (ATMG00990.1 NADH dehydrogenase 3)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-47
Identity = 98/118 (83.05%), Postives = 101/118 (85.59%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPI IYLVIS LVSLI LG+ FPFASNSSTY EKLSAYECGFDPSGDA+SRFDIRF
Sbjct: 2   MSEFAPISIYLVISLLVSLILLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSRFDIRF 61

Query: 61  YLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILF+I D       P AVP NKIDLFG WSMMAFLFILTIGFLYEWKRGA DRE
Sbjct: 62  YLVSILFLIPDLEVTFFFPWAVPPNKIDLFGFWSMMAFLFILTIGFLYEWKRGASDRE 119

[Close]

BLAST of CmoCh12G007750.1 vs. TAIR10
Match: ATCG00440.1 (ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.7e-10
Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 1


Query: 12  VISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD 71
           V++FL+S    G+  P         EKLS+YE G +P GDA  +F IR+Y+ +++F++ D
Sbjct: 22  VLAFLIS----GVLSPIRKGP----EKLSSYESGIEPIGDAWLQFRIRYYMFALVFVVFD 81

Query: 72  PEAVPL----NKIDLFG-SWSMMAFLF--ILTIGFLYEWKRGALD 110
            E V L       D+ G S  + AF+F  IL +G +Y W++GAL+
Sbjct: 82  VETVFLYPWAMSFDVLGVSAFIEAFIFVLILILGLVYAWRKGALE 118

[Close]

BLAST of CmoCh12G007750.1 vs. NCBI nr
Match: gi|346683368|ref|YP_004849330.1| (NADH dehydrogenase subunit 3 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 8.0e-49
Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLGL FPF+SNSSTY EKLSAYECGFDPSGDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFSSNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL ILTIGFLYEWKRGA DRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. NCBI nr
Match: gi|345034437|gb|AEN56123.1| (NADH dehydrogenase subunit 3 [Cucumis melo subsp. melo])

HSP 1 Score: 201.4 bits (511), Expect = 8.0e-49
Identity = 104/118 (88.14%), Postives = 106/118 (89.83%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLGL FPFASNS+TY EKLSAYECGFDPSGDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISPLVSLIPLGLPFPFASNSATYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL ILTIGFLYEWKRGA DRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. NCBI nr
Match: gi|1016470804|ref|YP_009241665.1| (NADH dehydrogenase subunit 3 (mitochondrion) [Ziziphus jujuba])

HSP 1 Score: 196.4 bits (498), Expect = 2.6e-47
Identity = 102/118 (86.44%), Postives = 104/118 (88.14%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLG+ FPFASNSSTY EKLSAYECGFDPSGDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISSLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKID FGSWSMMAFL ILTIG LYEWKRGA DRE
Sbjct: 61  YLVSILFIILDPEVTFSFPWAVPLNKIDPFGSWSMMAFLLILTIGSLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. NCBI nr
Match: gi|54606761|dbj|BAD66784.1| (NADH dehydrogenase subunit 3 (mitochondrion) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 195.7 bits (496), Expect = 4.4e-47
Identity = 100/118 (84.75%), Postives = 104/118 (88.14%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           MSEFAPICIYLVIS LVSLIPLG+ FPF+SN+STY EKLSAYECGFDP GDA+SRFDIRF
Sbjct: 1   MSEFAPICIYLVISLLVSLIPLGVPFPFSSNTSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKID FGSWSMMAFL ILTIGFLYEWKRGA DRE
Sbjct: 61  YLVSILFIILDPEVTFFFPWAVPLNKIDPFGSWSMMAFLLILTIGFLYEWKRGASDRE 118

[Close]

BLAST of CmoCh12G007750.1 vs. NCBI nr
Match: gi|385198371|gb|AFI44267.1| (NADH dehydrogenase subunit 3 (mitochondrion) [Silene vulgaris])

HSP 1 Score: 194.5 bits (493), Expect = 9.8e-47
Identity = 100/118 (84.75%), Postives = 103/118 (87.29%), Query Frame = 1


Query: 1   MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRF 60
           M EFAPICIYLVIS LVSLIPLGL FPF+SN+STY EKLSAYECGFDP GDA+SRFDIRF
Sbjct: 1   MLEFAPICIYLVISLLVSLIPLGLPFPFSSNTSTYPEKLSAYECGFDPFGDARSRFDIRF 60

Query: 61  YLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDRE 112
           YLVSILFIILDPE       AVPLNKID FG WSMMAFL ILTIGFLYEWKRGALDRE
Sbjct: 61  YLVSILFIILDPEVTFFFPWAVPLNKIDPFGFWSMMAFLLILTIGFLYEWKRGALDRE 118

The following BLAST results are available for this feature:

BLAST of CmoCh12G007750.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NU3M_PANGI	8.8e-48	83.90	NADH-ubiquinone oxidoreductase chain 3 OS=Panax ginseng GN=ND3 PE=3 SV=1	[more]
NU3M_PINSY	1.6e-44	79.66	NADH-ubiquinone oxidoreductase chain 3 OS=Pinus sylvestris GN=NAD3 PE=2 SV=2	[more]
NU3M_HELAN	1.6e-44	81.36	NADH-ubiquinone oxidoreductase chain 3 OS=Helianthus annuus GN=ND3 PE=2 SV=1	[more]
NU3M_WHEAT	1.6e-44	81.36	NADH-ubiquinone oxidoreductase chain 3 OS=Triticum aestivum GN=ND3 PE=2 SV=1	[more]
NU3M_SOLTU	2.7e-44	81.36	NADH-ubiquinone oxidoreductase chain 3 OS=Solanum tuberosum GN=ND3 PE=3 SV=1	[more]

BLAST of CmoCh12G007750.1 vs. TrEMBL


Match Name	E-value	Identity	Description
G3EU38_CUCME	5.6e-49	88.14	NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis melo subsp. melo GN=nad3 PE=3 ...	[more]
G3EIY2_CUCSA	5.6e-49	88.14	NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis sativus GN=nad3 PE=3 SV=1	[more]
A0A142BZ04_ZIZJJ	1.8e-47	86.44	NADH-ubiquinone oxidoreductase chain 3 OS=Ziziphus jujuba GN=nad3 PE=3 SV=1	[more]
Q5U6C6_BETVU	3.1e-47	84.75	NADH-ubiquinone oxidoreductase chain 3 OS=Beta vulgaris subsp. vulgaris GN=nad3 ...	[more]
J7FAB9_SILVU	6.8e-47	84.75	NADH-ubiquinone oxidoreductase chain 3 OS=Silene vulgaris GN=nad3 PE=3 SV=1	[more]

BLAST of CmoCh12G007750.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G07751.1	1.2e-47	83.05	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein	[more]
ATMG00990.1	1.2e-47	83.05	ATMG00990.1 NADH dehydrogenase 3	[more]
ATCG00440.1	2.7e-10	38.10	ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein	[more]

BLAST of CmoCh12G007750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|346683368\|ref\|YP_004849330.1\|	8.0e-49	88.14	NADH dehydrogenase subunit 3 [Cucumis sativus]	[more]
gi\|345034437\|gb\|AEN56123.1\|	8.0e-49	88.14	NADH dehydrogenase subunit 3 [Cucumis melo subsp. melo]	[more]
gi\|1016470804\|ref\|YP_009241665.1\|	2.6e-47	86.44	NADH dehydrogenase subunit 3 (mitochondrion) [Ziziphus jujuba]	[more]
gi\|54606761\|dbj\|BAD66784.1\|	4.4e-47	84.75	NADH dehydrogenase subunit 3 (mitochondrion) [Beta vulgaris subsp. vulgaris]	[more]
gi\|385198371\|gb\|AFI44267.1\|	9.8e-47	84.75	NADH dehydrogenase subunit 3 (mitochondrion) [Silene vulgaris]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000440	NADH_UbQ/plastoQ_OxRdtase_su3

Vocabulary: **Molecular Function**
Term	Definition
GO:0008137	NADH dehydrogenase (ubiquinone) activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031966	mitochondrial membrane
cellular_component	GO:0070469	respiratory chain
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh12G007750	CmoCh12G007750	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh12G007750.1	CmoCh12G007750.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G007750.1.exon.1	CmoCh12G007750.1.exon.1	exon
CmoCh12G007750.1.exon.2	CmoCh12G007750.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G007750.1.CDS.1	CmoCh12G007750.1.CDS.1	CDS
CmoCh12G007750.1.CDS.2	CmoCh12G007750.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000440	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	PANTHER	PTHR11058	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3	coord: 1..111 score: 5.0
IPR000440	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	PFAM	PF00507	Oxidored_q4	coord: 30..109 score: 1.1
None	No IPR available	PANTHER	PTHR11058:SF11	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3	coord: 1..111 score: 5.0