CmoCh11G013800.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G013800.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Rapid alkalinization factor
Location	Cmo_Chr11 : 9642388 .. 9642753 (+)
Sequence length	366

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACAATGAAGCTCTCCATCTTTATCCTCCTCGTCTTTGTCGTAGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTTGTCAACGATAATGCTGCATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCCCGCAAGAGGTATTTAAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGTGCCGCTATCACTGGATGTGCTCGATTCACTGATTAA

mRNA sequence

ATGGGAACAATGAAGCTCTCCATCTTTATCCTCCTCGTCTTTGTCGTAGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTTGTCAACGATAATGCTGCATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCCCGCAAGAGGTATTTAAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGTGCCGCTATCACTGGATGTGCTCGATTCACTGATTAA

Coding sequence (CDS)

ATGGGAACAATGAAGCTCTCCATCTTTATCCTCCTCGTCTTTGTCGTAGCTGTTCCGCTCTCCTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTTGTCAACGATAATGCTGCATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGTCGACAACTTTTCCAATATGGATTCGTTTATAATAAGGAAGCCCGCAAGAGGTATTTAAGCTACTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAAGGATCAATCCTTATCGTCGCGGTTGTGCCGCTATCACTGGATGTGCTCGATTCACTGATTAA

Homology

[Close]

BLAST of CmoCh11G013800.1 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.1e-14
Identity = 50/113 (44.25%), Postives = 62/113 (54.87%), Query Frame = 1


Query: 8   IFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVYN 67
           + IL +  +AV    A    +   S VN        G       +E +RRQL        
Sbjct: 6   LLILGLLTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQL-------- 65

Query: 68  KEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
             AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Sbjct: 66  -AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]

BLAST of CmoCh11G013800.1 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.3e-14
Identity = 50/119 (42.02%), Postives = 65/119 (54.62%), Query Frame = 1


Query: 1   MGTMKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLF 60
           MG   L IF LL+  +      A +  +   S +N            S   +E +RRQL 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTK--SCINGQGCIGEDDELESLMDSETNRRQLA 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           +          +RY+ Y AL++NN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 61  R---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]

BLAST of CmoCh11G013800.1 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 1


Query: 29  NASSLVNDNAAYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRYLSYYALRQNNI 88
           + S+ + D     + GG+  E    DS   RR L          A +RY+SY ALR+N I
Sbjct: 55  SVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTI 114

Query: 89  PCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 115 PCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmoCh11G013800.1 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1


Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  +Y+SY ALR+N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmoCh11G013800.1 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-10
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 1


Query: 37  NAAYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYD 96
           ++ +S   G  +E + E+   + F         A+K+Y+SY A+R+N++PC RRG SYY+
Sbjct: 39  SSLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYN 98

Query: 97  CKKRRRINPYRRGCAAITGCAR 119
           C++  + NPY RGC+ IT C R
Sbjct: 99  CQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmoCh11G013800.1 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-24
Identity = 68/121 (56.20%), Postives = 79/121 (65.29%), Query Frame = 1


Query: 1   MGTMKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLF 60
           M + KL +F+LL+ VVA PL  AL +    S    D   Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + +YL Y ALR+NNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of CmoCh11G013800.1 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.1e-21
Identity = 64/121 (52.89%), Postives = 78/121 (64.46%), Query Frame = 1


Query: 4   MKLSI-FILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTE--DSRRQLF 63
           MKL +  +LLV  +A+ L  AL + + A      N  Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
           QYGF Y K  + +YL Y ALR+NN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]

BLAST of CmoCh11G013800.1 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.3e-14
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ Y+SY AL++NN+PCGRRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmoCh11G013800.1 vs. TrEMBL
Match: A0A078FRQ3_BRANA (BnaA05g09880D protein OS=Brassica napus GN=BnaA05g09880D PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-13
Identity = 51/113 (45.13%), Postives = 63/113 (55.75%), Query Frame = 1


Query: 8   IFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVYN 67
           + IL +  +AV    A    S   S VN         G  S   +E +RRQL        
Sbjct: 6   LLILCLLTLAVVAESANVTWSLTRSCVNGQGCIGDDDGLESLMDSETNRRQL-------- 65

Query: 68  KEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
             AR+RY+SY AL++NN+PC RRG SYYDC KR+R NPYRRGC+ IT C R T
Sbjct: 66  -AARRRYISYGALKKNNVPCSRRGRSYYDCTKRKRANPYRRGCSIITHCYRLT 109

[Close]

BLAST of CmoCh11G013800.1 vs. TrEMBL
Match: M4CMN5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-13
Identity = 51/113 (45.13%), Postives = 63/113 (55.75%), Query Frame = 1


Query: 8   IFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVYN 67
           + IL +  +AV    A    S   S VN         G  S   +E +RRQL        
Sbjct: 6   LLILCLLTLAVVAESANVTWSLTRSCVNGQGCIGDDDGLESLMDSETNRRQL-------- 65

Query: 68  KEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
             AR+RY+SY AL++NN+PC RRG SYYDC KR+R NPYRRGC+ IT C R T
Sbjct: 66  -AARRRYISYGALKKNNVPCSRRGRSYYDCTKRKRANPYRRGCSIITHCYRLT 109

[Close]

BLAST of CmoCh11G013800.1 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15
Identity = 50/113 (44.25%), Postives = 62/113 (54.87%), Query Frame = 1


Query: 8   IFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVYN 67
           + IL +  +AV    A    +   S VN        G       +E +RRQL        
Sbjct: 6   LLILGLLTLAVVAESANATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQL-------- 65

Query: 68  KEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
             AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Sbjct: 66  -AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHCYRQT 109

[Close]

BLAST of CmoCh11G013800.1 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 78.6 bits (192), Expect = 3.0e-15
Identity = 50/119 (42.02%), Postives = 65/119 (54.62%), Query Frame = 1


Query: 1   MGTMKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLF 60
           MG   L IF LL+  +      A +  +   S +N            S   +E +RRQL 
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTK--SCINGQGCIGEDDELESLMDSETNRRQLA 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           +          +RY+ Y AL++NN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Sbjct: 61  R---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYRY 108

[Close]

BLAST of CmoCh11G013800.1 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 70.9 bits (172), Expect = 6.3e-13
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 1


Query: 29  NASSLVNDNAAYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRYLSYYALRQNNI 88
           + S+ + D     + GG+  E    DS   RR L          A +RY+SY ALR+N I
Sbjct: 55  SVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTI 114

Query: 89  PCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 115 PCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmoCh11G013800.1 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1


Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  +Y+SY ALR+N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmoCh11G013800.1 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 1


Query: 37  NAAYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYD 96
           ++ +S   G  +E + E+   + F         A+K+Y+SY A+R+N++PC RRG SYY+
Sbjct: 39  SSLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYN 98

Query: 97  CKKRRRINPYRRGCAAITGCAR 119
           C++  + NPY RGC+ IT C R
Sbjct: 99  CQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmoCh11G013800.1 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 9.7e-24
Identity = 68/121 (56.20%), Postives = 79/121 (65.29%), Query Frame = 1


Query: 1   MGTMKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLF 60
           M + KL +F+LL+ VVA PL  AL +    S    D   Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + +YL Y ALR+NNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of CmoCh11G013800.1 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 6.3e-23
Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 1


Query: 1   MGTMKLSIFILLVFVVAVPLSFALHET-SNASSLVNDNAAYSFFGGDSSEAMTEDSRRQL 60
           M +MKL +F+L++ VVA PL  A  +  ++A +  N    Y F   +      EDSRR L
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSDDWTHAYAAPN----YDFTTNN------EDSRRLL 60

Query: 61  FQYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGF Y K  + +YL Y ALR+NN PC  RG SYYDCKKRR+ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARF 111

Query: 121 TD 122
           TD
Sbjct: 121 TD 111

[Close]

BLAST of CmoCh11G013800.1 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-20
Identity = 64/121 (52.89%), Postives = 78/121 (64.46%), Query Frame = 1


Query: 4   MKLSI-FILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTE--DSRRQLF 63
           MKL +  +LLV  +A+ L  AL + + A      N  Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
           QYGF Y K  + +YL Y ALR+NN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]

BLAST of CmoCh11G013800.1 vs. NCBI nr
Match: gi|729376459|ref|XP_010549330.1| (PREDICTED: protein RALF-like 19 [Tarenaya hassleriana])

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-15
Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = 1


Query: 12  LVFVVAVPLSFALHETSNAS-----SLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYGFVY 71
           L+FV A+     + E++NAS     S VN         G  +   +E +RRQL Q     
Sbjct: 5   LLFVFALLTLAMVAESANASWPLTKSCVNGEGCIGDEDGVETLMDSETNRRQLAQ----- 64

Query: 72  NKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
                +RY+SY ALR+NN+PC RRG SYYDC++R+R+NPYRRGC+ IT CARFT
Sbjct: 65  ----GRRYISYGALRKNNVPCSRRGRSYYDCRRRKRVNPYRRGCSVITHCARFT 109

[Close]

BLAST of CmoCh11G013800.1 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 88.6 bits (218), Expect = 8.2e-15
Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 1


Query: 4   MKLSIFILLVFVVAVPLSFALHETSNASSLVNDNAAYSFFGGDSSEAMTEDSRRQLFQYG 63
           +KL +  LL+ +  V  + + H+ S     ++  +   F G D+   M  ++ R+    G
Sbjct: 3   VKLCLIFLLLALAVVAEASSFHDASWGLDHLSHGSVGDFIGEDNEMLMDSEASRRALAGG 62

Query: 64  FVYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 122
                   ++Y+SY AL++N +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFTD
Sbjct: 63  --------RKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFTD 112

The following BLAST results are available for this feature:

BLAST of CmoCh11G013800.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF19_ARATH	3.1e-14	44.25	Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1	[more]
RLF4_ARATH	5.3e-14	42.02	Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1	[more]
RLF23_ARATH	1.1e-11	43.01	Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1	[more]
RLF33_ARATH	1.2e-10	57.14	Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1	[more]
RLF22_ARATH	2.7e-10	39.02	Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1	[more]

BLAST of CmoCh11G013800.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHU4_CUCSA	6.8e-24	56.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1	[more]
A0A0A0KCD7_CUCSA	9.1e-21	52.89	F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1	[more]
R0HVQ3_9BRAS	6.3e-14	59.42	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1	[more]
A0A078FRQ3_BRANA	2.4e-13	45.13	BnaA05g09880D protein OS=Brassica napus GN=BnaA05g09880D PE=4 SV=1	[more]
M4CMN5_BRARP	2.4e-13	45.13	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]

BLAST of CmoCh11G013800.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33775.1	1.8e-15	44.25	ralf-like 19	[more]
AT1G28270.1	3.0e-15	42.02	ralf-like 4	[more]
AT3G16570.1	6.3e-13	43.01	rapid alkalinization factor 23	[more]
AT4G15800.1	6.9e-12	57.14	ralf-like 33	[more]
AT3G05490.1	1.5e-11	39.02	ralf-like 22	[more]

BLAST of CmoCh11G013800.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461879\|ref\|XP_004148669.1\|	9.7e-24	56.20	PREDICTED: protein RALF-like 19 [Cucumis sativus]	[more]
gi\|659080853\|ref\|XP_008441015.1\|	6.3e-23	54.92	PREDICTED: protein RALF-like 19 [Cucumis melo]	[more]
gi\|449466199\|ref\|XP_004150814.1\|	1.3e-20	52.89	PREDICTED: protein RALF-like 4 [Cucumis sativus]	[more]
gi\|729376459\|ref\|XP_010549330.1\|	2.2e-15	46.49	PREDICTED: protein RALF-like 19 [Tarenaya hassleriana]	[more]
gi\|1009109354\|ref\|XP_015889777.1\|	8.2e-15	38.98	PREDICTED: protein RALF-like 19 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh11G013800	CmoCh11G013800	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh11G013800.1	CmoCh11G013800.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G013800.1.exon.1	CmoCh11G013800.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G013800.1.CDS.1	CmoCh11G013800.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 53..118 score: 7.0
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 8..120 score: 5.5