CmoCh08G006770.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTGGATAAAATCTCGCAGGCCATCGTTCTTGCTGCCCATTCAATAATCTTTCTTGTTCTGTTGCATTATGGAAATGGCGAATGAATGGAGTCGCACTGCTCTTCTTATCATCGACTTCCAGGTTTTTCTTAATTTTCTTCCTAATTTTCGCTCTTCAAATTCATGCTCAAAATCAACCTTCTTCCAATTCTTGGTTGCAGAGAGATTTCTTTGATGAACGATCTGTGTTTGCTGTACCAGGAGCCTACGCCATACTTCCAAGCGTGTATGATGCCCTCGAATGTGCAAGGAAGCGAGGCATGTTCGTCGTTTGGGTCCGTTTCTTCCTTTGTCTGCTTTAATTTTGTTTTTTGGAATTGTAATCCCTACGAAATCCCTAAAGCATTTCAACAATCAAGAAAATGTTGTTTCTGGTAACTTTTCTGTTATAGATACATTAGTGGTTTCGGATTGCGAGAGATTATTCCCGTTCTTCTGAGATGCTTGTCAAGTTACTCTGATGTATGGAGAAATTGAACCCGAGAGCCCTGATTGTTAGTTGAGAAAATGTTTCATATAACGTTATATGGTAAGATATGAAAACTATTTGAAAGAATCTATAATTTCAACAATCTCCATATACTATCATGTATAATTTCAACAATCGAACTAGAAAAAGGGAAAAATGTTGTTTGTTGATGTGGATTCAGACCGAAGGTAGCTCTGCTCTCCAGTTAAGTAGTCAAAGCAGGCAGACCTAACCTTCAAGATAGGCTCACAAGACAAGTGTGGTGCTATGCCCAATGCTCGGATGCCTAATTTCTTAGATTGCAGAGGTTTTGAGCTTAGTTAGGATAGTTTGCATAACTGGTTAGTGGTATGAGTCCCTTCTATTTATATTTTTTCTCCTTCACTCGCGTGTTAGAGTCGTACGTTGAGTCACCTAGAATTAGAGCGAAGGGACACCTACCTCAACTTAGATGACACCCAGCTTGATAGGCATGGTATTCCTCTTGGCTTGGCCTTGGGAGCCTGGCCAGCGATTCTTCCTTCAATGTGCCCGTGGGCTTTCAAGTCACCCCATGACACTGTTATTTGTGGGTCTTTTATTATGTTTATGTGTTGAGGATTGTTGGGAGGGAGTCCCACGTTGGCTAATTTAAGGAATGATTATGAGTTTATAAGTAAGGAATACATCTTCATTGGTACGAGGCCTTTTCGGGAAGCCCAAAGCAAAGTCATGTGAGCTTATGTTCAAAATGGACAATATCATACCATTGTGGAGATCCGTGATTCATAACATTATGCTGATTGTTGTACAAGTTGATTCTGATTATCACATGTTGCAGCATTGACTTCGTTAGTTAACTCTTATTATCCTTGAGTTTAATTGATTGCTGCTCATTACCCTGTTTGGTACTAATTGAAGAGTAAAGAGAGTGAAATTCGTACTAGCAAATTGGTAATATGCTGAATTAGTCTGTTTTAATCCAAGGTTGTGCGAGAGCATGATCCTGAAGGACGTGACGTTGAACGGTTTCGACGCCATCTCTACGGCAGTGGAAAGCAGAATCCGGTATCAAAGGGAAGCATAGGGGCAGAGTTAATAGAAGGCTTTGAAATAAAAGAAGGAGAATACAAGTTGGTGAAAACCAGGTTCAGTGCCTTCTTTAATACTAACTTGCATTCCCTTCTGCAAGCGACGGGTATTACTGATTTGGTCATCTGTGGTAAGATTCAATATGTACACATCTCCTGTTACCGATCGAATAAGAATTCAAAGAATGGAATAAATGGTTGATGGCTGATACATATTCTAGGTGTTCAAACGCCAAACTGTATCAGACAGACTGTTTTCGATGCTATATCTTTGGATTACCATTCTATCACTGTTCTTTATGATGCAACAGCAGCTGCTTCAGTCCAAATCCATCATGGTATGTGAATTTGCTGATCTAAATCCCTTCTCTTTCCAAGAACAATACATGTCTATGATTTTGCTATTGAAATCTCTTCATATATATGACAATGAAAATGCTGTGAGGAGGTGAAAAAAAAAACAGTGCTGATGAACTTTGTGAGATGAAATCAAATGAATGATGAGGGAATTTCTGAATTTTTTTTTTGTATCAGATAATATCACTGACATGGAGAATGTGGGAGTTGTGGTCGTAAGAGTCGATCAATGGGACGGGTCTGTTGTTGAACCCCTACCACCCCTACCTACCATGGGAAATGTAGTTAGTGCTGGTAAATGATCTCCTACGATAAATAATGGTTCGATCTCAACCCGTGCAAGATTGGATGTATCGAAATAATCAAACACTCCGTATTCCAGGTTATTGTCGTTTTTCTTCTTCTTTTCTTTTGGAGAAAGTATGACCATGGTGATGGAATAAGTGAAGTACGTTTTTCATATTTTCATGTAAGAGTCTAGTTGAGTGATTTGAAGATTTCATGTAGGTTTCAACCCTTCATAAAAGCAACACTTTTTAAATAACTTGTTTAAGCCTAAACATGTCTGCCTTCTTAAAGTAAGTTCCTTTGAAAATACTCTTCCCTCAGAGAGAACATAATTGACCGGTAGTCATGCATGCGCTATATCTGAGCGCTTGAGTTCGAACTCCA ACTGGATAAAATCTCGCAGGCCATCGTTCTTGCTGCCCATTCAATAATCTTTCTTGTTCTGTTGCATTATGGAAATGGCGAATGAATGGAGTCGCACTGCTCTTCTTATCATCGACTTCCAGAGAGATTTCTTTGATGAACGATCTGTGTTTGCTGTACCAGGAGCCTACGCCATACTTCCAAGCGTGTATGATGCCCTCGAATGTGCAAGGAAGCGAGGCATGTTCGTCGTTTGGGTTGTGCGAGAGCATGATCCTGAAGGACGTGACGTTGAACGGTTTCGACGCCATCTCTACGGCAGTGGAAAGCAGAATCCGGTATCAAAGGGAAGCATAGGGGCAGAGTTAATAGAAGGCTTTGAAATAAAAGAAGGAGAATACAAGTTGGTGAAAACCAGGTTCAGTGCCTTCTTTAATACTAACTTGCATTCCCTTCTGCAAGCGACGGGTATTACTGATTTGGTCATCTGTGGTGTTCAAACGCCAAACTGTATCAGACAGACTGTTTTCGATGCTATATCTTTGGATTACCATTCTATCACTGTTCTTTATGATGCAACAGCAGCTGCTTCAGTCCAAATCCATCATGATAATATCACTGACATGGAGAATGTGGGAGTTGTGGTCGTAAGAGTCGATCAATGGGACGGGTCTGTTGTTGAACCCCTACCACCCCTACCTACCATGGGAAATGTAGTTAGTGCTGGTAAATGATCTCCTACGATAAATAATGGTTCGATCTCAACCCGTGCAAGATTGGATGTATCGAAATAATCAAACACTCCGTATTCCAGGTTATTGTCGTTTTTCTTCTTCTTTTCTTTTGGAGAAAGTATGACCATGGTGATGGAATAAGTGAAGTACGTTTTTCATATTTTCATGTAAGAGTCTAGTTGAGTGATTTGAAGATTTCATGTAGGTTTCAACCCTTCATAAAAGCAACACTTTTTAAATAACTTGTTTAAGCCTAAACATGTCTGCCTTCTTAAAGTAAGTTCCTTTGAAAATACTCTTCCCTCAGAGAGAACATAATTGACCGGTAGTCATGCATGCGCTATATCTGAGCGCTTGAGTTCGAACTCCA ATGGAAATGGCGAATGAATGGAGTCGCACTGCTCTTCTTATCATCGACTTCCAGAGAGATTTCTTTGATGAACGATCTGTGTTTGCTGTACCAGGAGCCTACGCCATACTTCCAAGCGTGTATGATGCCCTCGAATGTGCAAGGAAGCGAGGCATGTTCGTCGTTTGGGTTGTGCGAGAGCATGATCCTGAAGGACGTGACGTTGAACGGTTTCGACGCCATCTCTACGGCAGTGGAAAGCAGAATCCGGTATCAAAGGGAAGCATAGGGGCAGAGTTAATAGAAGGCTTTGAAATAAAAGAAGGAGAATACAAGTTGGTGAAAACCAGGTTCAGTGCCTTCTTTAATACTAACTTGCATTCCCTTCTGCAAGCGACGGGTATTACTGATTTGGTCATCTGTGGTGTTCAAACGCCAAACTGTATCAGACAGACTGTTTTCGATGCTATATCTTTGGATTACCATTCTATCACTGTTCTTTATGATGCAACAGCAGCTGCTTCAGTCCAAATCCATCATGATAATATCACTGACATGGAGAATGTGGGAGTTGTGGTCGTAAGAGTCGATCAATGGGACGGGTCTGTTGTTGAACCCCTACCACCCCTACCTACCATGGGAAATGTAGTTAGTGCTGGTAAATGA
BLAST of CmoCh08G006770.1 vs. Swiss-Prot
Match: NIC4_ARATH (Probable inactive nicotinamidase At3g16190 OS=Arabidopsis thaliana GN=At3g16190 PE=2 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.5e-61 Identity = 114/191 (59.69%), Postives = 146/191 (76.44%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. Swiss-Prot
Match: RUTB_HALO1 (Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) GN=rutB PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 8.0e-13 Identity = 51/189 (26.98%), Postives = 94/189 (49.74%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. Swiss-Prot
Match: RUTB_CAUST (Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=rutB PE=3 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.0e-12 Identity = 52/175 (29.71%), Postives = 88/175 (50.29%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. Swiss-Prot
Match: RUTB_AGRRK (Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rutB PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.2e-12 Identity = 47/174 (27.01%), Postives = 88/174 (50.57%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. Swiss-Prot
Match: RUTB_ECO7I (Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=rutB PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.2e-12 Identity = 52/185 (28.11%), Postives = 86/185 (46.49%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. TrEMBL
Match: A0A0A0K7E5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447030 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 1.0e-83 Identity = 150/190 (78.95%), Postives = 167/190 (87.89%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. TrEMBL
Match: A0A059AI19_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02954 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 4.6e-68 Identity = 125/190 (65.79%), Postives = 153/190 (80.53%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. TrEMBL
Match: B9GXC4_POPTR (Isochorismatase hydrolase family protein OS=Populus trichocarpa GN=POPTR_0003s05020g PE=4 SV=2) HSP 1 Score: 251.1 bits (640), Expect = 1.2e-63 Identity = 119/195 (61.03%), Postives = 149/195 (76.41%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. TrEMBL
Match: F6HYD7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04150 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.5e-63 Identity = 122/190 (64.21%), Postives = 147/190 (77.37%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. TrEMBL
Match: A0A0B2P977_GLYSO (Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB OS=Glycine soja GN=glysoja_032719 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 2.6e-63 Identity = 117/192 (60.94%), Postives = 148/192 (77.08%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. TAIR10
Match: AT3G16190.1 (AT3G16190.1 Isochorismatase family protein) HSP 1 Score: 236.1 bits (601), Expect = 2.0e-62 Identity = 114/191 (59.69%), Postives = 146/191 (76.44%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: gi|449448020|ref|XP_004141764.1| (PREDICTED: probable inactive nicotinamidase At3g16190 [Cucumis sativus]) HSP 1 Score: 317.8 bits (813), Expect = 1.5e-83 Identity = 150/190 (78.95%), Postives = 167/190 (87.89%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: gi|659131118|ref|XP_008465520.1| (PREDICTED: uncharacterized protein LOC103503139 [Cucumis melo]) HSP 1 Score: 312.4 bits (799), Expect = 6.2e-82 Identity = 148/193 (76.68%), Postives = 168/193 (87.05%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: gi|702483912|ref|XP_010033854.1| (PREDICTED: uncharacterized protein LOC104423090 isoform X1 [Eucalyptus grandis]) HSP 1 Score: 265.8 bits (678), Expect = 6.6e-68 Identity = 125/190 (65.79%), Postives = 153/190 (80.53%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: gi|702483918|ref|XP_010033855.1| (PREDICTED: uncharacterized protein LOC104423090 isoform X2 [Eucalyptus grandis]) HSP 1 Score: 263.8 bits (673), Expect = 2.5e-67 Identity = 124/190 (65.26%), Postives = 152/190 (80.00%), Query Frame = 1
BLAST of CmoCh08G006770.1 vs. NCBI nr
Match: gi|566160913|ref|XP_002304210.2| (isochorismatase hydrolase family protein [Populus trichocarpa]) HSP 1 Score: 251.1 bits (640), Expect = 1.7e-63 Identity = 119/195 (61.03%), Postives = 149/195 (76.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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