CmoCh05G008620.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACAGTCCATGTAAAGCCATGTACCGCCACGTGGCCTTCTTCAACCTCTGAATCCATTTCTCAAAAACCTGATTCCCCTCATTCTTCTTCTTCAATTTCCACCATGATCCTCTCTATCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCTCTCCTCTCATCGCCGCTCCTGAGCCAGCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCGTCGCGTTGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTCATGGTACGTTGGAGCTATTGTTTTTGCTGGTTCATCATCTATTTTACTTGTACCGAATTGATATATATGGTGCGATAGTAATTATGATGATGTTGATATCTTTGGTTAGATTTTTGCGTTGTTTTGGGAAATATTGTTGTTCATTGTGGATCAGGAAGCATTGGTATTATACTTCACATAGGGCAGGCATGTTGTGCTAGTTATCATTACGATAAAATCCATGTTCTGATTTGCTTTGCTATATTGTAGAACTGGGATATTTGTTGATTCCTGTTCTTCAAAATTTTATAGAAAGATATGGTCAGGGAATATTACTCCTCTTTAGTTCATTGTTTTCCTACCTGCCAGTCAAAAATTAGTATTAGATTAATGTTTTGTGGTGGAAACATGCAGTTTTTGCTGATTTAGAAGAAATCATTGGAGAGGAATGTAAAATTTGCGATAGAATTTGAAGTTGTAGAGACGTGGTAATGGAGTGAATATTCTGGACATTGAATTAATGCTATCTCTGTTTTTCTTTGAAGAATAACGTGTTCATTGTGGCTGTATTGTTGGTCGAGCCATATCTTATTGCATTCTTGTGTTTGTTCTCTCCGAGTGAGTGATGTGTGCGGATAGCATTCTGAAAGTTGAATACATTGTCATGTCTATTATTGTAAGTTGCAAAGATTGGCACTGATTAAGGGAATTATTGAAGGAGACTGCCTTAATGTAGTTGTCTACATGTTAACTAATACCATTATAATAGCCCAAGTCTACCGATGGCAAATATTGTCCTCTTTGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGAAGAGGTTTTCACACCCTTATAAATAATACTTCATTCTCCCCAACCGATGTGGGATCTCACAATCCAGCGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCGATGTGGGATCCCCCAATCCACCCTCTTTCGGAACCTAGTGTCCTTGCTGGCACACCGCCTCGTATCCACCTCTTTCAAGGCTTAGCCTCCTCGTTGGCACATCGCCCAATGTCTAGTTCTGATTTCATTTGTAATATGGTAATTTCTCCTTCCCACCCCAAATGGTGCAAAATTACTAGTCACCTTGGGTAACCTCCTTGAATAATTAAGATTTTATGCATTCTCACATCTTTGGAATCAACTTATATCAATAAGATGAGTATTCATGTTTAAACTCTAACCTTCATGATTTTTATTCAAGTTACAATGCATTTTTCTTTGATATTTCACCAGACTGCTTTGCATTCGTCAGAATTTTATATTATTATATGGACGTTCTTCATAATCTAGCCATAGTTACAAGTCATATGTTTTTAATAAGAGGTTGCATCTTTGGATTGCCAATAATTTCAGAATGAAGCACAGAATCTTCAGCTTGAAGACGGGGAACTAAGGGCAACATCATAGATTTAGCAATAAAGAAATATCGTGGCAAGAGTCTGGCTTTGGTGGCCTGGTAAATTTTCTCTACTACTTGTGGACTGCTTTTATTTTGTATAGTCTTTGTTTCCTGATAGTCCTGTCTGATGGGGAAAGGAGGCTAAAATAGCTCACAGAAGTATTTAGCCTCCAATCCTTCCAAGTAGAATTCTGAATTTGAGGGAGGGAGATTGTTGTAGAAATATTTAGCCTCCAATCCTTCAAATCTATACTATTATCTGAGTTTAAGTGAGGGGGTTGTTGCAAGTTTCTTTTTAATCGCTCTATGAAGTATATTACTGGTTCTGGCTGTGATTGGTTTTGGCTACTCGCATAAAGAAGTGTTGTTTTTGTTGTCTTGCCCTTATAGCCATAAAAGCTTTGCTTGTAAATGCACATTGCAAAAGTGATCTTTTAGTAGCTAAAGAGGATTCACATGTATCTTATATAGCTGACATTTTCATTCATTTGATGTTTAGATATAGATTCATATTATTCTTCAATTACCATTCACATGTGTTTGTATTATGAAGCTTAAAGACATAATTTTGTAGGAAAAAAGGAAAAGGAATCGTATTCAGGTGCAAGAACCAATCGATGAAGATGAAGAAAAAGGCTATTCAATTGGCATGAATAAGGTATAGGATGATGGGTACAATAATTTACTTGTTGACCAATTTTATTATAGTTATTTCAAATGTCTTGTGGTTCTTTTCTTGTCTTCAAAACTCTTTTACTTTTCCATTCCAGCCACGCTCGGTTGATTGACGCTCTTCTAGGCTTATCTTGCATATAAATTCTCGGGTCCCAAGTCCCAAATCCTGCATCCGTTGAGAACATTTCAATTTTGACTTAGACAAAATTGCAAGTACGAGAACATGTATAATATATATATATATAAAACATAAAAGGCAATTATCAAAGGTTTACTTACAGTGTAGAACACAATTTTGAGGCATTCAATCAGAAATTAC GACAGTCCATGTAAAGCCATGTACCGCCACGTGGCCTTCTTCAACCTCTGAATCCATTTCTCAAAAACCTGATTCCCCTCATTCTTCTTCTTCAATTTCCACCATGATCCTCTCTATCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCTCTCCTCTCATCGCCGCTCCTGAGCCAGCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCGTCGCGTTGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTCATGAATGAAGCACAGAATCTTCAGCTTGAAGACGGGGAACTAAGGGCAACATCATAGATTTAGCAATAAAGAAATATCGTGGCAAGAGTCTGGCTTTGGTGGCCTGGAAAAAAGGAAAAGGAATCGTATTCAGGTGCAAGAACCAATCGATGAAGATGAAGAAAAAGGCTATTCAATTGGCATGAATAAGCCACGCTCGGTTGATTGACGCTCTTCTAGGCTTATCTTGCATATAAATTCTCGGGTCCCAAGTCCCAAATCCTGCATCCGTTGAGAACATTTCAATTTTGACTTAGACAAAATTGCAAGTACGAGAACATGTATAATATATATATATATAAAACATAAAAGGCAATTATCAAAGGTTTACTTACAGTGTAGAACACAATTTTGAGGCATTCAATCAGAAATTAC ATGATCCTCTCTATCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCTCTCCTCTCATCGCCGCTCCTGAGCCAGCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAGTCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCAATCCGTCGCGTTGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTCATGA
BLAST of CmoCh05G008620.1 vs. TrEMBL
Match: A0A0A0LN19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G99990 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 1.7e-70 Identity = 135/168 (80.36%), Postives = 148/168 (88.10%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. TrEMBL
Match: W9S3W1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005575 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 5.3e-51 Identity = 101/141 (71.63%), Postives = 116/141 (82.27%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. TrEMBL
Match: A0A067K3P8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18043 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 7.6e-50 Identity = 97/156 (62.18%), Postives = 127/156 (81.41%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. TrEMBL
Match: M5W029_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011321mg PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 9.3e-48 Identity = 94/146 (64.38%), Postives = 115/146 (78.77%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. TrEMBL
Match: A0A061EZD5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_025141 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 8.7e-46 Identity = 99/159 (62.26%), Postives = 116/159 (72.96%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. TAIR10
Match: AT5G16380.1 (AT5G16380.1 Protein of unknown function, DUF538) HSP 1 Score: 167.5 bits (423), Expect = 6.8e-42 Identity = 83/146 (56.85%), Postives = 106/146 (72.60%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538) HSP 1 Score: 161.8 bits (408), Expect = 3.7e-40 Identity = 72/121 (59.50%), Postives = 94/121 (77.69%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538) HSP 1 Score: 149.4 bits (376), Expect = 1.9e-36 Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. TAIR10
Match: AT1G61667.1 (AT1G61667.1 Protein of unknown function, DUF538) HSP 1 Score: 124.8 bits (312), Expect = 5.1e-29 Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538) HSP 1 Score: 124.0 bits (310), Expect = 8.7e-29 Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. NCBI nr
Match: gi|659082203|ref|XP_008441718.1| (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]) HSP 1 Score: 284.6 bits (727), Expect = 1.1e-73 Identity = 142/168 (84.52%), Postives = 149/168 (88.69%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. NCBI nr
Match: gi|449442285|ref|XP_004138912.1| (PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus]) HSP 1 Score: 273.5 bits (698), Expect = 2.5e-70 Identity = 135/168 (80.36%), Postives = 148/168 (88.10%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. NCBI nr
Match: gi|1009118300|ref|XP_015875784.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 217.2 bits (552), Expect = 2.1e-53 Identity = 108/153 (70.59%), Postives = 125/153 (81.70%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. NCBI nr
Match: gi|1009118302|ref|XP_015875785.1| (PREDICTED: uncharacterized protein LOC107412521 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 217.2 bits (552), Expect = 2.1e-53 Identity = 108/153 (70.59%), Postives = 125/153 (81.70%), Query Frame = 1
BLAST of CmoCh05G008620.1 vs. NCBI nr
Match: gi|703116813|ref|XP_010101226.1| (hypothetical protein L484_005575 [Morus notabilis]) HSP 1 Score: 208.8 bits (530), Expect = 7.6e-51 Identity = 101/141 (71.63%), Postives = 116/141 (82.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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