CmoCh04G017460.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G017460.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Myb domain protein 110
Location	Cmo_Chr04 : 8817867 .. 8819112 (-)
Sequence length	1059

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATGTTGGTTGATGATGATTATGGTATGAAAGTGGAGGGAAGCATGGATCTTGATCTCAACTCTGCACTCATGTCCATCTCTGATTTTCCATTTTCATGTGAGTCTATGATGAGTAGAAGCTCAGAGACTGATTTCAGCGATGGATTTGTTGAAAATCACAACGCTAATCCAGCTTCTTGTTCCAATGCTAATAATAATAATACTACTACACCCACTGGGGCTCAGTCTAGGCTCTGTGCCAGAGGCCATTGGAGGCCTGCAGAGGACACCAAATTGAGAGAGCTCGTAGCCATTTATGGCCCCCAAAATTGGAACCTCATTGCAGAGAAGCTAGAGGGAAGATCCGGTAACACACCCACAATCATATTATGTTTCTTTCAATTTCAATTTTTTTTTTTTTTTTTGAAATGTTTTCTGTTTGTGTTCTTATGAAGGTAAGAGCTGCAGATTGAGATGGTTTAACCAACTGGACCCAAGGATTAACAGAAGGGCATTCAGTGAAGAAGAGGAAGAGAGGCTAATGCAAGCTCATAGGATATATGGAAACAAATGGGCGATGATTGCAAGGCTTTTTCCTGGGAGGACTGATAATGCAGTGAAGAATCATTGGCATGTCATAATGGCAAGGAAGTATAGAGAGCATTCTCGTTGTTACAGAAGAAGGAAGCTGACCCAATCTGTTTACACTAAAATGGACCAAGATTTGAGCTTCCTTAAGCATCATAATATGCCAAACTTTCAGGCTTCTATTGGTGCTGTTGATTATGCGTTTTTAACCCAAATGCCCATTGCTGGAGCAGAGGCAATGCCCTGTGACACCCCGTTCTTCACCTCATGTGCTCATCTTTCAAATCTCAATGTCCTTCCAGGTTAAATTTTGATTGAATATACATACAGTTAGTTACCCATTACAGAGTATGGTATGAATTGGGCATTGGTTATTATGGTGTGTGTGTGTGTGTGTGCAGATCCCAAGAGCAGATTTTGGGATGGAACAGGCAATGGGATTCTGGTACCAGGAAGCCAGAGTGAGTATGGGGCGTGTAACACGGCGGCGGCGGCGGCAAACGACGGCGTCGGGGGATCACAAGTGGCAACAGGTGGATCTTCTTCATCACCAAGATTTATTGACTTTCTTGGAGTTGGAGCCACAGGAAGTTGAAATGTGAGAATAATAATTAGTAGATTACCTCACTGCAATGGATTAGGAGAGGAAACTGAAGAATGTAGTGAGTGGTGG

mRNA sequence

ATGGGTATGTTGGTTGATGATGATTATGGTATGAAAGTGGAGGGAAGCATGGATCTTGATCTCAACTCTGCACTCATGTCCATCTCTGATTTTCCATTTTCATGTGAGTCTATGATGAGTAGAAGCTCAGAGACTGATTTCAGCGATGGATTTGTTGAAAATCACAACGCTAATCCAGCTTCTTGTTCCAATGCTAATAATAATAATACTACTACACCCACTGGGGCTCAGTCTAGGCTCTGTGCCAGAGGCCATTGGAGGCCTGCAGAGGACACCAAATTGAGAGAGCTCGTAGCCATTTATGGCCCCCAAAATTGGAACCTCATTGCAGAGAAGCTAGAGGGAAGATCCGGTAAGAGCTGCAGATTGAGATGGTTTAACCAACTGGACCCAAGGATTAACAGAAGGGCATTCAGTGAAGAAGAGGAAGAGAGGCTAATGCAAGCTCATAGGATATATGGAAACAAATGGGCGATGATTGCAAGGCTTTTTCCTGGGAGGACTGATAATGCAGTGAAGAATCATTGGCATGTCATAATGGCAAGGAAGTATAGAGAGCATTCTCGTTGTTACAGAAGAAGGAAGCTGACCCAATCTGTTTACACTAAAATGGACCAAGATTTGAGCTTCCTTAAGCATCATAATATGCCAAACTTTCAGGCTTCTATTGGTGCTGTTGATTATGCGTTTTTAACCCAAATGCCCATTGCTGGAGCAGAGGCAATGCCCTGTGACACCCCGTTCTTCACCTCATGTGCTCATCTTTCAAATCTCAATGTCCTTCCAGATCCCAAGAGCAGATTTTGGGATGGAACAGGCAATGGGATTCTGGTACCAGGAAGCCAGAGTGAGTATGGGGCGTGTAACACGGCGGCGGCGGCGGCAAACGACGGCGTCGGGGGATCACAAGTGGCAACAGGTGGATCTTCTTCATCACCAAGATTTATTGACTTTCTTGGAGTTGGAGCCACAGGAAGTTGAAATGTGAGAATAATAATTAGTAGATTACCTCACTGCAATGGATTAGGAGAGGAAACTGAAGAATGTAGTGAGTGGTGG

Coding sequence (CDS)

ATGGGTATGTTGGTTGATGATGATTATGGTATGAAAGTGGAGGGAAGCATGGATCTTGATCTCAACTCTGCACTCATGTCCATCTCTGATTTTCCATTTTCATGTGAGTCTATGATGAGTAGAAGCTCAGAGACTGATTTCAGCGATGGATTTGTTGAAAATCACAACGCTAATCCAGCTTCTTGTTCCAATGCTAATAATAATAATACTACTACACCCACTGGGGCTCAGTCTAGGCTCTGTGCCAGAGGCCATTGGAGGCCTGCAGAGGACACCAAATTGAGAGAGCTCGTAGCCATTTATGGCCCCCAAAATTGGAACCTCATTGCAGAGAAGCTAGAGGGAAGATCCGGTAAGAGCTGCAGATTGAGATGGTTTAACCAACTGGACCCAAGGATTAACAGAAGGGCATTCAGTGAAGAAGAGGAAGAGAGGCTAATGCAAGCTCATAGGATATATGGAAACAAATGGGCGATGATTGCAAGGCTTTTTCCTGGGAGGACTGATAATGCAGTGAAGAATCATTGGCATGTCATAATGGCAAGGAAGTATAGAGAGCATTCTCGTTGTTACAGAAGAAGGAAGCTGACCCAATCTGTTTACACTAAAATGGACCAAGATTTGAGCTTCCTTAAGCATCATAATATGCCAAACTTTCAGGCTTCTATTGGTGCTGTTGATTATGCGTTTTTAACCCAAATGCCCATTGCTGGAGCAGAGGCAATGCCCTGTGACACCCCGTTCTTCACCTCATGTGCTCATCTTTCAAATCTCAATGTCCTTCCAGATCCCAAGAGCAGATTTTGGGATGGAACAGGCAATGGGATTCTGGTACCAGGAAGCCAGAGTGAGTATGGGGCGTGTAACACGGCGGCGGCGGCGGCAAACGACGGCGTCGGGGGATCACAAGTGGCAACAGGTGGATCTTCTTCATCACCAAGATTTATTGACTTTCTTGGAGTTGGAGCCACAGGAAGTTGA

Homology

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BLAST of CmoCh04G017460.1 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-31
Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 1


Query: 83  RGHWRPAEDTKLRELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEE 142
           +G W P ED +LR LV  YGP+NW +I++ + GRSGKSCRLRW NQL P++  R FS EE
Sbjct: 6   KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEE 65

Query: 143 EERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARK 184
           +E + +AH  +GNKWA IARL  GRTDNAVKNHW+  + RK
Sbjct: 66  DETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of CmoCh04G017460.1 vs. Swiss-Prot
Match: MYB_BOVIN (Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.2e-29
Identity = 65/167 (38.92%), Postives = 98/167 (58.68%), Query Frame = 1


Query: 83  RGHWRPAEDTKLRELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEE 142
           +G W   ED ++ ELV  YGP+ W++IA+ L+GR GK CR RW N L+P + + +++EEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 143 EERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYT 202
           +  + QAH+  GN+WA IA+L PGRTDNA+KNHW+  M RK  +        K +Q   T
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVT 211

Query: 203 KMDQDLSFLKHHNMPNFQASIGAVDYAFLTQMPIAGAEAMPCDTPFF 250
                 SF K+ ++  F  +  +       Q+P AG  ++  D P++
Sbjct: 212 -----TSFQKNSHLMGFTHAPPS------AQLPPAGQPSVNSDYPYY 247

[Close]

BLAST of CmoCh04G017460.1 vs. Swiss-Prot
Match: MYBB_CHICK (Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-27
Identity = 62/172 (36.05%), Postives = 98/172 (56.98%), Query Frame = 1


Query: 83  RGHWRPAEDTKLRELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEE 142
           +G W   ED K+ ELV  YG + W LIA+ L+GR GK CR RW N L+P + + +++EEE
Sbjct: 83  KGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSSWTEEE 142

Query: 143 EERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYT 202
           +  + +AH++ GN+WA IA+L PGRTDNAVKNHW+  + RK  +        K +Q +Y 
Sbjct: 143 DRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKV-DTGGFLNETKESQPLYL 202

Query: 203 KMDQDLSFLKHHN-------MPNFQASIGAVDYAFLTQMPIAGAEAMPCDTP 248
            ++ D +  +          +PN+   I  +    ++   + G + +P + P
Sbjct: 203 LVEVDDNESQSGTRAESQTIVPNWPVDISEIKEEDVSDEEVTGLQELPSELP 253

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BLAST of CmoCh04G017460.1 vs. Swiss-Prot
Match: MYB_HUMAN (Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 2.3e-27
Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = 1


Query: 83  RGHWRPAEDTKLRELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEE 142
           +G W   ED ++ ELV  YGP+ W++IA+ L+GR GK CR RW N L+P + + +++EEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 143 EERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYT 202
           +  + QAH+  GN+WA IA+L PGRTDNA+KNHW+  M RK  +        K +Q    
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQESSKASQPAVA 211

Query: 203 KMDQDLSFL 212
              Q  S L
Sbjct: 212 TSFQKNSHL 220

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BLAST of CmoCh04G017460.1 vs. Swiss-Prot
Match: MYB_MOUSE (Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 2.3e-27
Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = 1


Query: 83  RGHWRPAEDTKLRELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEE 142
           +G W   ED ++ ELV  YGP+ W++IA+ L+GR GK CR RW N L+P + + +++EEE
Sbjct: 92  KGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEE 151

Query: 143 EERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYT 202
           +  + QAH+  GN+WA IA+L PGRTDNA+KNHW+  M RK  +        K +Q+   
Sbjct: 152 DRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQEPSKASQTPVA 211

Query: 203 KMDQDLSFLKHHNMPNF 220
                 SF K++++  F
Sbjct: 212 -----TSFQKNNHLMGF 223

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BLAST of CmoCh04G017460.1 vs. TrEMBL
Match: A0A0A0KQN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G605730 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.3e-109
Identity = 232/376 (61.70%), Postives = 256/376 (68.09%), Query Frame = 1


Query: 1   MGMLVDDDYGMKVEGSMDLDLNSALMSIS---------------DFPFSCESMMSRSSE- 60
           MGM +D+D     E S +LDLNSA +  S               +FPFSCES +  ++  
Sbjct: 1   MGMFIDED-----EESFNLDLNSAAIFSSSSQESCEEINGRAFWNFPFSCESDIVNNNNN 60

Query: 61  -----TDFSDGFVENHNANPASCSNANNNNTTTPTGAQSRLCARGHWRPAEDTKLRELVA 120
                ++FSDG  +N   NP SCS   NN  ++ TGAQSRLCARGHWRPAEDTKLRELVA
Sbjct: 61  NNNGGSEFSDGLNQNAANNPTSCS---NNTPSSSTGAQSRLCARGHWRPAEDTKLRELVA 120

Query: 121 IYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAM 180
           +YGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAM
Sbjct: 121 LYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAM 180

Query: 181 IARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFL---KHHN- 240
           IARLFPGRTDNAVKNHWHVIMARKYRE SRCYRRRKL+QSVY KM++DLSFL   K HN 
Sbjct: 181 IARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVYRKMEEDLSFLNIPKDHNH 240

Query: 241 -----------------MPNFQASIGAVDYAFLTQMPI-AGAEAMPC------DTPFFTS 300
                              +F    G VDY FL QM I  G E +        + P+F S
Sbjct: 241 HDTITTAAAATTITTTSSSSFGNFEGCVDYGFLRQMVIGGGGETLSSNYNTTPNNPYFNS 300

Query: 301 CAHLSNLNVLPDPKSRFWDGTGNGILVPGSQS--EYGACNTAAAAANDGV-GGSQVATGG 325
           CAHLS LNVLPDPKSRFW+GT NG LVP S    +Y   NTA   +N GV G S V   G
Sbjct: 301 CAHLSTLNVLPDPKSRFWEGTSNGFLVPRSHGHHQYETYNTAVPPSNGGVEGSSSVTVEG 360

[Close]

BLAST of CmoCh04G017460.1 vs. TrEMBL
Match: B9S8Y5_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0837110 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.9e-68
Identity = 145/229 (63.32%), Postives = 165/229 (72.05%), Query Frame = 1


Query: 4   LVDDDYGMKVEGSMDLDLNSALMSISDFPFSCES----MMSRSSETDFSDGFVENH---N 63
           L  ++YG+  +  M     SA  +   FPF        +  +    D SDGF EN+   N
Sbjct: 72  LSPNNYGLGTQSEMGNARGSAT-TWGSFPFMSSDHNGVLEGKGVSDDCSDGFGENNETIN 131

Query: 64  ANPASCSNA-------NNNNTTTPTG-------AQSRLCARGHWRPAEDTKLRELVAIYG 123
            N A+CSN        NN N  + +G        QS+LCARGHWRPAEDTKL+ELVA+YG
Sbjct: 132 HNNANCSNDHEEENPNNNENMNSSSGKETDSSSGQSKLCARGHWRPAEDTKLKELVALYG 191

Query: 124 PQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIAR 183
           PQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YGNKWAMIAR
Sbjct: 192 PQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIAR 251

Query: 184 LFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFL 212
           LFPGRTDNAVKNHWHVIMARKYRE S  YRRRKL+QSVY + D+  SF+
Sbjct: 252 LFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQSVYRRADETSSFV 299

[Close]

BLAST of CmoCh04G017460.1 vs. TrEMBL
Match: F6HPQ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02600 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.2e-67
Identity = 168/349 (48.14%), Postives = 199/349 (57.02%), Query Frame = 1


Query: 45  TDFSDGFVENHNANPASCS-NANNNNTTTPTGAQ-----SRLCARGHWRPAEDTKLRELV 104
           +D SDGF EN+     + + N  N N    +G +     S+LCARGHWRPAEDTKL+ELV
Sbjct: 109 SDCSDGFGENNETMDLNANINEENPNENIVSGKETDSGHSKLCARGHWRPAEDTKLKELV 168

Query: 105 AIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWA 164
           A+YGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLM AHR+YGNKWA
Sbjct: 169 ALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMDAHRLYGNKWA 228

Query: 165 MIARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFL------K 224
           MIARLFPGRTDNAVKNHWHVIMARKYRE S  YRRRKL+QSVY +M++D SF+      +
Sbjct: 229 MIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQSVYRRMEEDPSFVCRDTATR 288

Query: 225 HHNMP---------------------NFQASIGAVDYAFLTQMPI-AGAEAMPCD--TPF 284
              MP                      F  ++G V Y       + +G EA+      P 
Sbjct: 289 TETMPPYSINLSSGGINNNLSPFPFATFNGAVGGVVYGSNGSPQVNSGGEAISSSKLPPH 348

Query: 285 FTSCAHLSNLNVLPDPKS----------RFWDGTGN--------------GILVPGSQSE 325
              CA  +       PKS          R WD   +               +++   QS 
Sbjct: 349 TGFCAQQTPFEFFSGPKSHDMISMFSQHRSWDRPRDEPNNNTSGFYPQYPPLMMAMQQSN 408

[Close]

BLAST of CmoCh04G017460.1 vs. TrEMBL
Match: A0A067LAW8_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_15621 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 7.8e-67
Identity = 172/349 (49.28%), Postives = 203/349 (58.17%), Query Frame = 1


Query: 22  NSALMSISDFPFSCESMMSRSSETDFSDGFVENHNANPASCSNANNNNTT------TPTG 81
           +S+  S   FPF    M S+  + DFSDGF EN++    +  N + NN        T + 
Sbjct: 62  SSSTRSAWGFPF----MESKGCD-DFSDGFGENNDTTIINDDNIDPNNENMISGKETDSS 121

Query: 82  AQSRLCARGHWRPAEDTKLRELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR 141
            QS+LCARGHWRPAEDTKL+ELVA+YGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR
Sbjct: 122 GQSKLCARGHWRPAEDTKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR 181

Query: 142 RAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRK 201
           RAF+EEEEERLMQAHR+YGNKWAMIARLFPGRTDNAVKNHWHVIMARKYRE S  YRRRK
Sbjct: 182 RAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSTAYRRRK 241

Query: 202 LTQSVYTKMDQ----------DLSFLKHHNMPNFQASIGAVDYAF--LTQMPIAG---AE 261
           L+QSVY ++++            SF+  +  P          Y F  ++  PI     AE
Sbjct: 242 LSQSVYRRIEETSTTTTTTTTTTSFISRNPEPQ-----PPQPYCFTNMSPYPIGNFNVAE 301

Query: 262 AMPCDTPFFTSCAHLSNLNVLPDPKSRFWDGTG--------NGILVPG----SQSEY-GA 321
                 PF       SN  +    ++R WD           N ++ PG     Q  Y  A
Sbjct: 302 QAGSSIPFDFFSGPKSNDMMGMLRQNRSWDRPSNNNNIEPHNNVISPGFFTQQQDPYIMA 361

Query: 322 CNTAAAAANDGVGGSQVATGGSSSSPR------------FIDFLGVGAT 325
              +    N     S  +T   +SSP             F DFLGVGAT
Sbjct: 362 MQQSNCYQNPYCSFSSDSTTAQASSPSLPESHFETIPPPFFDFLGVGAT 400

[Close]

BLAST of CmoCh04G017460.1 vs. TrEMBL
Match: A0A061EBW9_THECC (Myb domain protein 105 OS=Theobroma cacao GN=TCM_011689 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.0e-66
Identity = 129/174 (74.14%), Postives = 148/174 (85.06%), Query Frame = 1


Query: 44  ETDFSDGFVENHNA-NPASCSNANNNNTTTPTG-----AQSRLCARGHWRPAEDTKLREL 103
           ++D SDGF +N+ + N  +  N  N+N    +G      QS+LCARGHWRPAEDTKL+EL
Sbjct: 105 DSDCSDGFGDNNRSINLNANLNEENSNENGVSGKETDSGQSKLCARGHWRPAEDTKLKEL 164

Query: 104 VAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKW 163
           VA+YGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YGNKW
Sbjct: 165 VALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKW 224

Query: 164 AMIARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFL 212
           AMIARLFPGRTDNAVKNHWHVIMARKYRE S  YRRRKL+QSVY +M++  +F+
Sbjct: 225 AMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQSVYRRMEETPTFV 278

[Close]

BLAST of CmoCh04G017460.1 vs. TAIR10
Match: AT1G26780.2 (AT1G26780.2 myb domain protein 117)

HSP 1 Score: 233.0 bits (593), Expect = 2.6e-61
Identity = 118/184 (64.13%), Postives = 139/184 (75.54%), Query Frame = 1


Query: 53  ENHNANPASCSNANNNNTTTPTG-------AQSRLCARGHWRPAEDTKLRELVAIYGPQN 112
           E++N NP   ++ +    TT +G       ++  +  RGHWRPAED KL+ELV+IYGPQN
Sbjct: 61  ESNNNNPNFSNSESGKKETTDSGQSWSSSSSKPSVLGRGHWRPAEDVKLKELVSIYGPQN 120

Query: 113 WNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFP 172
           WNLIAEKL+GRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YGNKWAMIARLFP
Sbjct: 121 WNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFP 180

Query: 173 GRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFLKHHN-MPNFQASIG 229
           GRTDN+VKNHWHV+MARKYREHS  YRRRKL  +    +   L+   H N  PN+ + I 
Sbjct: 181 GRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSN--NPLKPHLTNNHHPNPNPNYHSFIS 240

[Close]

BLAST of CmoCh04G017460.1 vs. TAIR10
Match: AT1G69560.1 (AT1G69560.1 myb domain protein 105)

HSP 1 Score: 229.9 bits (585), Expect = 2.2e-60
Identity = 114/151 (75.50%), Postives = 127/151 (84.11%), Query Frame = 1


Query: 53  ENHNANPASCSNANNNNTTT--PTGAQSRLC-ARGHWRPAEDTKLRELVAIYGPQNWNLI 112
           E+ N N +  SN N  +TT     G  S+   +RGHWRPAEDTKL+ELVA+YGPQNWNLI
Sbjct: 74  EDMNPNLSDYSNCNKKDTTVYRSCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLI 133

Query: 113 AEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTD 172
           AEKL+GRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YGNKWAMIARLFPGRTD
Sbjct: 134 AEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTD 193

Query: 173 NAVKNHWHVIMARKYREHSRCYRRRKLTQSV 201
           N+VKNHWHVIMARK+RE S  YRRRK   S+
Sbjct: 194 NSVKNHWHVIMARKFREQSSSYRRRKTMVSL 224

[Close]

BLAST of CmoCh04G017460.1 vs. TAIR10
Match: AT5G17800.1 (AT5G17800.1 myb domain protein 56)

HSP 1 Score: 198.4 bits (503), Expect = 7.0e-51
Identity = 88/116 (75.86%), Postives = 102/116 (87.93%), Query Frame = 1


Query: 74  TGAQSRLCARGHWRPAEDTKLRELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRI 133
           +G  +++C+RGHWRP ED KL+ELVA +GPQNWNLI+  L GRSGKSCRLRWFNQLDPRI
Sbjct: 84  SGINTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRI 143

Query: 134 NRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREHSR 190
           N+RAF+EEEE RL+ AHR YGNKWA+I+RLFPGRTDNAVKNHWHVIMAR+ RE  R
Sbjct: 144 NKRAFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRESQR 199

[Close]

BLAST of CmoCh04G017460.1 vs. TAIR10
Match: AT3G29020.2 (AT3G29020.2 myb domain protein 110)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-50
Identity = 87/117 (74.36%), Postives = 105/117 (89.74%), Query Frame = 1


Query: 78  SRLCARGHWRPAEDTKLRELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRA 137
           SR+C+RGHWR +EDT+L ELV++YGPQNWN IAE ++GR+GKSCRLRWFNQLDPRIN+RA
Sbjct: 62  SRVCSRGHWRISEDTQLMELVSVYGPQNWNHIAESMQGRTGKSCRLRWFNQLDPRINKRA 121

Query: 138 FSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRR 195
           FS+EEEERL+ AHR +GNKWAMIA+LF GRTDNA+KNHWHV+MARK R+ S  Y +R
Sbjct: 122 FSDEEEERLLAAHRAFGNKWAMIAKLFNGRTDNALKNHWHVLMARKMRQQSSSYVQR 178

[Close]

BLAST of CmoCh04G017460.1 vs. TAIR10
Match: AT1G17950.1 (AT1G17950.1 myb domain protein 52)

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-49
Identity = 85/110 (77.27%), Postives = 98/110 (89.09%), Query Frame = 1


Query: 80  LCARGHWRPAEDTKLRELVAIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFS 139
           +C+RGHWRPAED KLRELV  +GP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  F+
Sbjct: 2   MCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFT 61

Query: 140 EEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREHSR 190
           EEEEERL+ +HRI+GN+W++IAR FPGRTDNAVKNHWHVIMAR+ RE S+
Sbjct: 62  EEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSK 111

[Close]

BLAST of CmoCh04G017460.1 vs. NCBI nr
Match: gi|659091103|ref|XP_008446370.1| (PREDICTED: transcription factor MYB108 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 4.3e-111
Identity = 237/374 (63.37%), Postives = 259/374 (69.25%), Query Frame = 1


Query: 1   MGMLVDDDYGMKVEGSMDLDLNSALMSIS---------------DFPFSCESMMSRSSE- 60
           MGM  D+D     E S +LDLNSA +  S               +FPFSCES +  ++  
Sbjct: 1   MGMFTDED-----EESFNLDLNSAAIFSSSSQESCEEINGRAFWNFPFSCESDIVNNNNN 60

Query: 61  -----TDFSDGFVENHNANPASCSNANNNNTTTPTGAQSRLCARGHWRPAEDTKLRELVA 120
                ++FSDG  +N   NP SCS   NN  ++ TGAQSRLCARGHWRPAEDTKLRELVA
Sbjct: 61  NNNGGSEFSDGLNQNAANNPTSCS---NNTPSSSTGAQSRLCARGHWRPAEDTKLRELVA 120

Query: 121 IYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAM 180
           +YGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAM
Sbjct: 121 LYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAM 180

Query: 181 IARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFL---KHHN- 240
           IARLFPGRTDNAVKNHWHVIMARKYRE SRCYRRRKL+QSVY KM++DLSFL   K HN 
Sbjct: 181 IARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVYRKMEEDLSFLNIPKDHNH 240

Query: 241 --------------MPNFQASIGAVDYAFLTQMPI-AGAEAMPC------DTPFFTSCAH 300
                           +F    G VDYAFL QM I  G E M        + P+F SCAH
Sbjct: 241 HDKITAAAAATTTSCSSFGNFEGCVDYAFLRQMGIGGGGETMSSNYNITPNYPYFNSCAH 300

Query: 301 LSNLNVLPDPKSRFWDGTGNGILVPGSQS--EYGACNTAAAAANDGVGGSQVAT--GGSS 325
           LS LNVLPDPKSRFW+GT NG LVP S    +Y A NTAA  +N GV GS   T  G S 
Sbjct: 301 LSTLNVLPDPKSRFWEGTSNGFLVPRSHGHHQYEAYNTAAPPSNGGVEGSSSVTVEGRSK 360

[Close]

BLAST of CmoCh04G017460.1 vs. NCBI nr
Match: gi|778705423|ref|XP_011655686.1| (PREDICTED: transcription factor MYB108 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 1.8e-109
Identity = 232/376 (61.70%), Postives = 256/376 (68.09%), Query Frame = 1


Query: 1   MGMLVDDDYGMKVEGSMDLDLNSALMSIS---------------DFPFSCESMMSRSSE- 60
           MGM +D+D     E S +LDLNSA +  S               +FPFSCES +  ++  
Sbjct: 1   MGMFIDED-----EESFNLDLNSAAIFSSSSQESCEEINGRAFWNFPFSCESDIVNNNNN 60

Query: 61  -----TDFSDGFVENHNANPASCSNANNNNTTTPTGAQSRLCARGHWRPAEDTKLRELVA 120
                ++FSDG  +N   NP SCS   NN  ++ TGAQSRLCARGHWRPAEDTKLRELVA
Sbjct: 61  NNNGGSEFSDGLNQNAANNPTSCS---NNTPSSSTGAQSRLCARGHWRPAEDTKLRELVA 120

Query: 121 IYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAM 180
           +YGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAM
Sbjct: 121 LYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAM 180

Query: 181 IARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFL---KHHN- 240
           IARLFPGRTDNAVKNHWHVIMARKYRE SRCYRRRKL+QSVY KM++DLSFL   K HN 
Sbjct: 181 IARLFPGRTDNAVKNHWHVIMARKYREQSRCYRRRKLSQSVYRKMEEDLSFLNIPKDHNH 240

Query: 241 -----------------MPNFQASIGAVDYAFLTQMPI-AGAEAMPC------DTPFFTS 300
                              +F    G VDY FL QM I  G E +        + P+F S
Sbjct: 241 HDTITTAAAATTITTTSSSSFGNFEGCVDYGFLRQMVIGGGGETLSSNYNTTPNNPYFNS 300

Query: 301 CAHLSNLNVLPDPKSRFWDGTGNGILVPGSQS--EYGACNTAAAAANDGV-GGSQVATGG 325
           CAHLS LNVLPDPKSRFW+GT NG LVP S    +Y   NTA   +N GV G S V   G
Sbjct: 301 CAHLSTLNVLPDPKSRFWEGTSNGFLVPRSHGHHQYETYNTAVPPSNGGVEGSSSVTVEG 360

[Close]

BLAST of CmoCh04G017460.1 vs. NCBI nr
Match: gi|223538339|gb|EEF39946.1| (r2r3-myb transcription factor, putative [Ricinus communis])

HSP 1 Score: 267.7 bits (683), Expect = 2.7e-68
Identity = 145/229 (63.32%), Postives = 165/229 (72.05%), Query Frame = 1


Query: 4   LVDDDYGMKVEGSMDLDLNSALMSISDFPFSCES----MMSRSSETDFSDGFVENH---N 63
           L  ++YG+  +  M     SA  +   FPF        +  +    D SDGF EN+   N
Sbjct: 72  LSPNNYGLGTQSEMGNARGSAT-TWGSFPFMSSDHNGVLEGKGVSDDCSDGFGENNETIN 131

Query: 64  ANPASCSNA-------NNNNTTTPTG-------AQSRLCARGHWRPAEDTKLRELVAIYG 123
            N A+CSN        NN N  + +G        QS+LCARGHWRPAEDTKL+ELVA+YG
Sbjct: 132 HNNANCSNDHEEENPNNNENMNSSSGKETDSSSGQSKLCARGHWRPAEDTKLKELVALYG 191

Query: 124 PQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIAR 183
           PQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YGNKWAMIAR
Sbjct: 192 PQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIAR 251

Query: 184 LFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFL 212
           LFPGRTDNAVKNHWHVIMARKYRE S  YRRRKL+QSVY + D+  SF+
Sbjct: 252 LFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQSVYRRADETSSFV 299

[Close]

BLAST of CmoCh04G017460.1 vs. NCBI nr
Match: gi|1000958298|ref|XP_015576776.1| (PREDICTED: myb-like protein AA [Ricinus communis])

HSP 1 Score: 267.7 bits (683), Expect = 2.7e-68
Identity = 145/229 (63.32%), Postives = 165/229 (72.05%), Query Frame = 1


Query: 4   LVDDDYGMKVEGSMDLDLNSALMSISDFPFSCES----MMSRSSETDFSDGFVENH---N 63
           L  ++YG+  +  M     SA  +   FPF        +  +    D SDGF EN+   N
Sbjct: 72  LSPNNYGLGTQSEMGNARGSAT-TWGSFPFMSSDHNGVLEGKGVSDDCSDGFGENNETIN 131

Query: 64  ANPASCSNA-------NNNNTTTPTG-------AQSRLCARGHWRPAEDTKLRELVAIYG 123
            N A+CSN        NN N  + +G        QS+LCARGHWRPAEDTKL+ELVA+YG
Sbjct: 132 HNNANCSNDHEEENPNNNENMNSSSGKETDSSSGQSKLCARGHWRPAEDTKLKELVALYG 191

Query: 124 PQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIAR 183
           PQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAF+EEEEERLMQAHR+YGNKWAMIAR
Sbjct: 192 PQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMIAR 251

Query: 184 LFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFL 212
           LFPGRTDNAVKNHWHVIMARKYRE S  YRRRKL+QSVY + D+  SF+
Sbjct: 252 LFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQSVYRRADETSSFV 299

[Close]

BLAST of CmoCh04G017460.1 vs. NCBI nr
Match: gi|731373580|ref|XP_010651935.1| (PREDICTED: transcription factor RAX1 [Vitis vinifera])

HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67
Identity = 168/349 (48.14%), Postives = 199/349 (57.02%), Query Frame = 1


Query: 45  TDFSDGFVENHNANPASCS-NANNNNTTTPTGAQ-----SRLCARGHWRPAEDTKLRELV 104
           +D SDGF EN+     + + N  N N    +G +     S+LCARGHWRPAEDTKL+ELV
Sbjct: 109 SDCSDGFGENNETMDLNANINEENPNENIVSGKETDSGHSKLCARGHWRPAEDTKLKELV 168

Query: 105 AIYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWA 164
           A+YGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLM AHR+YGNKWA
Sbjct: 169 ALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMDAHRLYGNKWA 228

Query: 165 MIARLFPGRTDNAVKNHWHVIMARKYREHSRCYRRRKLTQSVYTKMDQDLSFL------K 224
           MIARLFPGRTDNAVKNHWHVIMARKYRE S  YRRRKL+QSVY +M++D SF+      +
Sbjct: 229 MIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQSVYRRMEEDPSFVCRDTATR 288

Query: 225 HHNMP---------------------NFQASIGAVDYAFLTQMPI-AGAEAMPCD--TPF 284
              MP                      F  ++G V Y       + +G EA+      P 
Sbjct: 289 TETMPPYSINLSSGGINNNLSPFPFATFNGAVGGVVYGSNGSPQVNSGGEAISSSKLPPH 348

Query: 285 FTSCAHLSNLNVLPDPKS----------RFWDGTGN--------------GILVPGSQSE 325
              CA  +       PKS          R WD   +               +++   QS 
Sbjct: 349 TGFCAQQTPFEFFSGPKSHDMISMFSQHRSWDRPRDEPNNNTSGFYPQYPPLMMAMQQSN 408

The following BLAST results are available for this feature:

BLAST of CmoCh04G017460.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB44_ARATH	1.5e-31	59.41	Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1	[more]
MYB_BOVIN	3.2e-29	38.92	Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1	[more]
MYBB_CHICK	1.7e-27	36.05	Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1	[more]
MYB_HUMAN	2.3e-27	44.19	Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2	[more]
MYB_MOUSE	2.3e-27	42.34	Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2	[more]

BLAST of CmoCh04G017460.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQN1_CUCSA	1.3e-109	61.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G605730 PE=4 SV=1	[more]
B9S8Y5_RICCO	1.9e-68	63.32	R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0837110 PE=4...	[more]
F6HPQ3_VITVI	1.2e-67	48.14	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02600 PE=4 SV=...	[more]
A0A067LAW8_JATCU	7.8e-67	49.28	MYB family protein OS=Jatropha curcas GN=JCGZ_15621 PE=4 SV=1	[more]
A0A061EBW9_THECC	3.0e-66	74.14	Myb domain protein 105 OS=Theobroma cacao GN=TCM_011689 PE=4 SV=1	[more]

BLAST of CmoCh04G017460.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G26780.2	2.6e-61	64.13	myb domain protein 117	[more]
AT1G69560.1	2.2e-60	75.50	myb domain protein 105	[more]
AT5G17800.1	7.0e-51	75.86	myb domain protein 56	[more]
AT3G29020.2	1.2e-50	74.36	myb domain protein 110	[more]
AT1G17950.1	1.3e-49	77.27	myb domain protein 52	[more]

BLAST of CmoCh04G017460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091103\|ref\|XP_008446370.1\|	4.3e-111	63.37	PREDICTED: transcription factor MYB108 [Cucumis melo]	[more]
gi\|778705423\|ref\|XP_011655686.1\|	1.8e-109	61.70	PREDICTED: transcription factor MYB108 [Cucumis sativus]	[more]
gi\|223538339\|gb\|EEF39946.1\|	2.7e-68	63.32	r2r3-myb transcription factor, putative [Ricinus communis]	[more]
gi\|1000958298\|ref\|XP_015576776.1\|	2.7e-68	63.32	PREDICTED: myb-like protein AA [Ricinus communis]	[more]
gi\|731373580\|ref\|XP_010651935.1\|	1.7e-67	48.14	PREDICTED: transcription factor RAX1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G017460	CmoCh04G017460	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G017460.1	CmoCh04G017460.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G017460.1.three_prime_UTR.1	CmoCh04G017460.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G017460.1.CDS.3	CmoCh04G017460.1.CDS.3	CDS
CmoCh04G017460.1.CDS.2	CmoCh04G017460.1.CDS.2	CDS
CmoCh04G017460.1.CDS.1	CmoCh04G017460.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G017460.1.exon.3	CmoCh04G017460.1.exon.3	exon
CmoCh04G017460.1.exon.2	CmoCh04G017460.1.exon.2	exon
CmoCh04G017460.1.exon.1	CmoCh04G017460.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 83..128 score: 1.0E-15coord: 135..177 score: 1.7
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 134..182 score: 1.8E-14coord: 82..131 score: 4.9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 84..136 score: 9.2E-26coord: 137..183 score: 1.0
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 83..176 score: 2.88
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 78..129 score: 16.791coord: 130..184 score: 26
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 54..208 score: 1.8E
None	No IPR available	PANTHER	PTHR10641:SF473	MYB TRANSCRIPTION FACTOR	coord: 54..208 score: 1.8E