Cla013055.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013055
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Tubby-like F-box protein 6 (AHRD V1 ***- F4HT64_ARATH); contains Interpro domain(s) IPR000007 Tubby, C-terminal
Location	Chr5 : 10413670 .. 10416166 (+)
Sequence length	1236

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTCCGAAGCATTGTTCGCGATGTGAGGGATAGTATTGGGAGCTTATCTAGACGGGGTTTTGAGGTCAAGTTGAGTGGTCATCATAGAGGAAAGTCCAATGCATCGTCGCTGAATGATCTACATGACCAGCCTCCTGTTGTTCAGAATGGCTGCTGGGCTAGTCTTCCACCCGAGCTGTTGTATGATGTCATTCGAAGACTTGAAGAGAGTGAAAACACATGGCCTTCACGAAAGAATGTCGTTGCCTGTGCTGCAGTATGTCGTTCTTGGAGAATTATGTGCATGGAGATAGTTAAAGGCCCAGAAATTTGTGGGAAGCTTACCTTCCCAGTGTCACTGAAGCAGGTACAGCTTCCTGTTTTATGACATTTCTTCTGCTATACCTAGACAGGAAGTTTGTAGGGTTAAATATTGGAAATTACATACTCATTGTACATTCTTTTTCTTTTTAAATTTTATAGCCAGGACCACGCGATGGATCTGTACAGTGCTTCATTAAGAGGGATAAATCCAACCTAACATACCACCTCTACTTGTGTCTTAGCCCTGGTAAGGAATATGCTCATCTGCTTGATTTTGTGTGTGCGAATCTTTTCTCAGTACGCTGATTGACATTGTAGATACACTACTAGAATACTTAATTTTGGCATTATGGCAGCACAGAAGTTCTTGAGAAGGCTTTTCACATTAACTTGTGCACTTCAAAGTTGTACTTGTTTTATGCATTCCATCAATTGCAAGTTTATGCAAGGCGCTGCAAAACTGCCGTTGATCAAGATTCAAAAAATTCTAAATGAACATGAAAGACCATGTTATGTGACTATTAATAGGATTATGAATTGGAATTTGCCTCTTGTCCTGCTGCCATTCAATTTGTTGAACACCTTAATTTGTTTATAATTTCGTTAATTCGACGGTACAGCTCTGCTGGTTGAAAATGGGAAATTTCTTCTCTCTGCAAAGCGTACACGAAGAACTACCAGCACAGAGTATATTATCTCGATGGACGCAGAAAACATTTCGAGATCAAGTAGCTCTTACATCGGAAAACTGAGGTGAGACTACACTTGATGAACAGCCATGAAATATATTGTTTGCTTGTTTTTCTACCTACATTAGTTACAACACTGGACTTTCACATTTGTTAGGGCACAAATTATGATTTTACAATAAGTCTGTGAGAACGATTTTATATGTGATATAAAACTTAGGTCTATACTGTGAATTCAACTACTAATGACGTTCTACAAGAGAGTTTGCTAAATTCTAGCTGTTGAAAGAGAAATCGAAGAAGGCAAAATGGGAACATGAGAGGGGAATTTCCTATTTAAGCCCTTAAACTAAATTTAAGAAAGGTGTTGATAGAGCAACAACCTCTTTTGATGGTTAATTTTCTTTTCAGTGACAAGACTTGAGGTGATAATTAGTATTCAATTTACTCTGGTTTTCCATGATTGATTTGATTCTATATTGGTGTGAAGTTTTGTTCTTCATGGTGCAATATATCATTCCTGATTCAATTTTCGTGTTTATTTTCAGGTCGAACTTTCTTGGAACAAAATTCATCGTCTATGATACTCAACCTCCATACACCGCTGCCCCGCTCCCTCCTCCGGGGAAAACTAGCCGTAGATTTTATTCAAAAAAGGTCTCACCAAAAGTCCCAACTGGCAGTTATAACATAGCCCATATAAGTTATGAACTAAACGTCTTAGGCACACGGGGACCCCGGAGAATGCACTGTATAATGCATTCAATACCAGTGTCTTCTCTTGATGCTGGTGGCACTGTTCCAGGACAACCCGAACTCCTCCCTCCCAACTCCCTCGACGACTCATTTCGGAGTGCATCCTTCTCCAAAGCCCTAGATCATTCCATGGAGTTCAGTAGTGCTAGATTTTCAGAAATTGGGAGGGCAGCATTGGATGGCGACGAGGAGGGAAAGATGAGACCTTTGGTTCTCAAAAACAAGCCCCCAAGATGGCACGAACAACTGCAATGTTGGTGCCTCAACTTTCGTGGGCGGGTAACCGTTGCATCGGTTAAGAACTTTCAGTTAATTGCAGCAATACAGCCAGCTGCTGGCGCTCCAACCCCGTCTCAACCAGGCCCACCCGAGCACGACAAGATCATTCTTCAGTTCGGGAAGGTCGGTAAAGACATGTTCACGATGGATTATCGTTATCCGCTCTCTGCTTTTCAGGCTTTTGCTATATGCTTGAGCAGCTTTGATACCAAATTGGCTTGTGAATAAAGAAAAGTATCCAAAGCTATGCATATGATGAGCAGAAAAAAGAAAAGAAAAGAAAAGAAAAAAAAAGTAACAACACCCCACTTTTATGCCTCTTTTCTTTTTTGTTATCCTTTTTCCCATCCCCTTTAACTTTTGGATTTCACTCTATTAGTTGTCTTCCTCTTCTTGTCATTTCATGGTTAGGTTAGTGAAATAGTTATTGTTGTGGCTATTGATGTAAAAGTTAATTGTAACTGA

mRNA sequence

ATGTCATTCCGAAGCATTGTTCGCGATGTGAGGGATAGTATTGGGAGCTTATCTAGACGGGGTTTTGAGGTCAAGTTGAGTGGTCATCATAGAGGAAAGTCCAATGCATCGTCGCTGAATGATCTACATGACCAGCCTCCTGTTGTTCAGAATGGCTGCTGGGCTAGTCTTCCACCCGAGCTGTTGTATGATGTCATTCGAAGACTTGAAGAGAGTGAAAACACATGGCCTTCACGAAAGAATGTCGTTGCCTGTGCTGCAGTATGTCGTTCTTGGAGAATTATGTGCATGGAGATAGTTAAAGGCCCAGAAATTTGTGGGAAGCTTACCTTCCCAGTGTCACTGAAGCAGCCAGGACCACGCGATGGATCTGTACAGTGCTTCATTAAGAGGGATAAATCCAACCTAACATACCACCTCTACTTGTGTCTTAGCCCTGCTCTGCTGGTTGAAAATGGGAAATTTCTTCTCTCTGCAAAGCGTACACGAAGAACTACCAGCACAGAGTATATTATCTCGATGGACGCAGAAAACATTTCGAGATCAAGTAGCTCTTACATCGGAAAACTGAGGTCGAACTTTCTTGGAACAAAATTCATCGTCTATGATACTCAACCTCCATACACCGCTGCCCCGCTCCCTCCTCCGGGGAAAACTAGCCGTAGATTTTATTCAAAAAAGGTCTCACCAAAAGTCCCAACTGGCAGTTATAACATAGCCCATATAAGTTATGAACTAAACGTCTTAGGCACACGGGGACCCCGGAGAATGCACTGTATAATGCATTCAATACCAGTGTCTTCTCTTGATGCTGGTGGCACTGTTCCAGGACAACCCGAACTCCTCCCTCCCAACTCCCTCGACGACTCATTTCGGAGTGCATCCTTCTCCAAAGCCCTAGATCATTCCATGGAGTTCAGTAGTGCTAGATTTTCAGAAATTGGGAGGGCAGCATTGGATGGCGACGAGGAGGGAAAGATGAGACCTTTGGTTCTCAAAAACAAGCCCCCAAGATGGCACGAACAACTGCAATGTTGGTGCCTCAACTTTCGTGGGCGGGTAACCGTTGCATCGGTTAAGAACTTTCAGTTAATTGCAGCAATACAGCCAGCTGCTGGCGCTCCAACCCCGTCTCAACCAGGCCCACCCGAGCACGACAAGATCATTCTTCAGTTCGGGAAGGTTAGTGAAATAGTTATTGTTGTGGCTATTGATGTAAAAGTTAATTGTAACTGA

Coding sequence (CDS)

ATGTCATTCCGAAGCATTGTTCGCGATGTGAGGGATAGTATTGGGAGCTTATCTAGACGGGGTTTTGAGGTCAAGTTGAGTGGTCATCATAGAGGAAAGTCCAATGCATCGTCGCTGAATGATCTACATGACCAGCCTCCTGTTGTTCAGAATGGCTGCTGGGCTAGTCTTCCACCCGAGCTGTTGTATGATGTCATTCGAAGACTTGAAGAGAGTGAAAACACATGGCCTTCACGAAAGAATGTCGTTGCCTGTGCTGCAGTATGTCGTTCTTGGAGAATTATGTGCATGGAGATAGTTAAAGGCCCAGAAATTTGTGGGAAGCTTACCTTCCCAGTGTCACTGAAGCAGCCAGGACCACGCGATGGATCTGTACAGTGCTTCATTAAGAGGGATAAATCCAACCTAACATACCACCTCTACTTGTGTCTTAGCCCTGCTCTGCTGGTTGAAAATGGGAAATTTCTTCTCTCTGCAAAGCGTACACGAAGAACTACCAGCACAGAGTATATTATCTCGATGGACGCAGAAAACATTTCGAGATCAAGTAGCTCTTACATCGGAAAACTGAGGTCGAACTTTCTTGGAACAAAATTCATCGTCTATGATACTCAACCTCCATACACCGCTGCCCCGCTCCCTCCTCCGGGGAAAACTAGCCGTAGATTTTATTCAAAAAAGGTCTCACCAAAAGTCCCAACTGGCAGTTATAACATAGCCCATATAAGTTATGAACTAAACGTCTTAGGCACACGGGGACCCCGGAGAATGCACTGTATAATGCATTCAATACCAGTGTCTTCTCTTGATGCTGGTGGCACTGTTCCAGGACAACCCGAACTCCTCCCTCCCAACTCCCTCGACGACTCATTTCGGAGTGCATCCTTCTCCAAAGCCCTAGATCATTCCATGGAGTTCAGTAGTGCTAGATTTTCAGAAATTGGGAGGGCAGCATTGGATGGCGACGAGGAGGGAAAGATGAGACCTTTGGTTCTCAAAAACAAGCCCCCAAGATGGCACGAACAACTGCAATGTTGGTGCCTCAACTTTCGTGGGCGGGTAACCGTTGCATCGGTTAAGAACTTTCAGTTAATTGCAGCAATACAGCCAGCTGCTGGCGCTCCAACCCCGTCTCAACCAGGCCCACCCGAGCACGACAAGATCATTCTTCAGTTCGGGAAGGTTAGTGAAATAGTTATTGTTGTGGCTATTGATGTAAAAGTTAATTGTAACTGA

Protein sequence

MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPELLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGPRDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENISRSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIAHISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKALDHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSEIVIVVAIDVKVNCN

Homology

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BLAST of Cla013055 vs. Swiss-Prot
Match: TLP8_ORYSJ (Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 2.2e-168
Identity = 299/415 (72.05%), Postives = 343/415 (82.65%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSG------HHRGKSNASSLNDLHDQPPVVQNGCW 60
           MSFRSIVRDVRDS GSLSRR FEV L+G      HHRGKS  S++++L D   ++Q   W
Sbjct: 1   MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQ-STVHELCDADLIIQESRW 60

Query: 61  ASLPPELLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVS 120
           ASLPPELL DVIRRLE SE+TWPSRK+VV+CAAVC++WR MC EIV  PE CGKLTFP+S
Sbjct: 61  ASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLS 120

Query: 121 LKQPGPRDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISM 180
           LKQPGPRDG +QCFIKRDKS  TYHLYLCLS A+L ++GKFLLSAKR R+TT TEY+ISM
Sbjct: 121 LKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISM 180

Query: 181 DAENISRSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPT 240
           DA+NISRSSS+YIGKLRSNFLGTKFI+YDTQP Y  A +PP G++SRRF SKKVSPK+P+
Sbjct: 181 DADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPS 240

Query: 241 GSYNIAHISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRS- 300
           GSYNIA ++YELNVLGTRGPRRMHC+MHSIP SS++ GG VPGQPE + P + ++SFRS 
Sbjct: 241 GSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRST 300

Query: 301 ASFSKA--LDHSM------EFSSARFSEIGRAALDGDEEG--KMRPLVLKNKPPRWHEQL 360
            SFSK+  +D SM      +FSSARFS+I    ++GDEEG  K RPLVL+NK PRWHEQL
Sbjct: 301 TSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQL 360

Query: 361 QCWCLNFRGRVTVASVKNFQLIAA-IQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           QCWCLNFRGRVT+ASVKNFQLIAA  QP AGAPTPSQP PPE DKIILQFGKV++
Sbjct: 361 QCWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAK 414

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BLAST of Cla013055 vs. Swiss-Prot
Match: TLP14_ORYSJ (Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1)

HSP 1 Score: 570.9 bits (1470), Expect = 1.2e-161
Identity = 287/415 (69.16%), Postives = 334/415 (80.48%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHD------QPPVVQNGCW 60
           MSFRSIVRDVRD  GSLSRRGFEV+L GH RG+S+ S++++L D         VVQ+ CW
Sbjct: 1   MSFRSIVRDVRDGFGSLSRRGFEVRLVGHRRGRSH-SAVHELRDGHAAAAAADVVQSSCW 60

Query: 61  ASLPPELLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVS 120
           A+LPPELL DVI RLE SE  WPSRKNVVACAAVCR+WR MC EIVK PE CGK+TFPVS
Sbjct: 61  ANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVS 120

Query: 121 LKQPGPRDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISM 180
           LKQPGPR+G++QCFIKRDKS  TY+LYLCLS A+LVE+GKFLLSAKR  R T TEY I M
Sbjct: 121 LKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFM 180

Query: 181 DAENISRSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPT 240
            A+N SRSS+ YIGKLRSN LGTKF++YDTQPP   A +   GKTSRRFYS+KVSPK P+
Sbjct: 181 SADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKNPS 240

Query: 241 GSYNIAHISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSA 300
            +Y+IA +SYELNVLGTRGPRRM+C+MHSIP SSL+AGGTVP QP+ +   SLD+SF S 
Sbjct: 241 STYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDESFGSI 300

Query: 301 SFSKA--LDHSMEFSSARFSEI-------GRAALDGDEEGKMRPLVLKNKPPRWHEQLQC 360
           SFSK+  +D S+ FSS+R+S+I       G  AL   +E K RPL+L+NK PRWHEQLQC
Sbjct: 301 SFSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQC 360

Query: 361 WCLNFRGRVTVASVKNFQLIAAIQPAAGAPTPSQPG---PPEHDKIILQFGKVSE 398
           WCLNF+GRVTVASVKNFQL+AA QPAAGAPTPSQP    PP+HDK+ILQFGKV++
Sbjct: 361 WCLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAK 414

[Close]

BLAST of Cla013055 vs. Swiss-Prot
Match: TLP10_ARATH (Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 7.5e-161
Identity = 294/415 (70.84%), Postives = 337/415 (81.20%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQ-----PPVVQNGCWA 60
           MSFR IV+D+RD  GSLSRR F+ +LS  H+GK+  SS  +         P +VQ   WA
Sbjct: 1   MSFRGIVQDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWA 60

Query: 61  SLPPELLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSL 120
           +LPPELL+DVI+RLEESE+ WP+RK+VVACA+VCRSWR MC EIV GPEICGKLTFPVSL
Sbjct: 61  NLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSL 120

Query: 121 KQPGPRDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMD 180
           KQPGPRD  +QCFIKRDKS LT+HL+LCLSPALLVENGKFLLSAKRTRRTT TEYIISMD
Sbjct: 121 KQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMD 180

Query: 181 AENISRSSSSYIGKLRSNFLGTKFIVYDTQ-PPYTAAPLPPPGKTSR-RFYSKKVSPKVP 240
           A+NISRSS+SY+GKLRSNFLGTKF+VYDTQ PP T++      +TSR RF+S++VSPKVP
Sbjct: 181 ADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVP 240

Query: 241 TGSYNIAHISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELL--PPNSLDDSF 300
           +GSYNIA I+YELNVLGTRGPRRMHCIM+SIP+SSL+ GG+VP QPE L   P SLDDSF
Sbjct: 241 SGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSF 300

Query: 301 RS-ASFSK-ALDH-SMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCL 360
           RS  SFSK + DH S++FSS+RFSE+G +  D +EE   RPL+LKNK PRWHEQLQCWCL
Sbjct: 301 RSNISFSKSSFDHRSLDFSSSRFSEMGISCDDNEEEASFRPLILKNKQPRWHEQLQCWCL 360

Query: 361 NFRGRVTVASVKNFQLIAAIQP------AAGAPTPSQPGPPEHDKIILQFGKVSE 398
           NFRGRVTVASVKNFQL+AA QP      AA APT S P  PE DK+ILQFGKV +
Sbjct: 361 NFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPT-SAPAHPEQDKVILQFGKVGK 414

[Close]

BLAST of Cla013055 vs. Swiss-Prot
Match: TLP13_ORYSJ (Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 7.0e-159
Identity = 283/411 (68.86%), Postives = 331/411 (80.54%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRD  GSLSRRGFEV++ GH RGKS+ + +++LHD  PV+Q+ CWASLPPE
Sbjct: 1   MSFRSIVRDVRDGFGSLSRRGFEVRILGHRRGKSHGA-VHELHDPVPVIQSSCWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LL D+I RLEESE TWPSRK+VVACA VCR+WR MC EIVK PE+CGK+TFP+SL+QPGP
Sbjct: 61  LLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPISLRQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDG++QCFI+RDKS  TY+LYL L  A+LV+NGKFLLSAKR    T TEY+ISM+A N+S
Sbjct: 121 RDGTMQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240
           RS+++ IGKLRSNFLGTKF++YDT  PY A      GKTSRRF S K + K P  +Y+IA
Sbjct: 181 RSTNTNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRF-SNKGTAKHPCSTYSIA 240

Query: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDD-SFRSASFSKA 300
           +ISYELNV GTRGPRRM C+MHSIP SSL+AGGTVP QP+ +  +SL++ SFRS SFSK+
Sbjct: 241 NISYELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKS 300

Query: 301 --LDHSMEFSSARFSE--------IGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLN 360
             +DHSM FSSA+FS+        IG   L  DEE K  PL+L+NK PRWHEQLQCWCLN
Sbjct: 301 SVMDHSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLN 360

Query: 361 FRGRVTVASVKNFQLIAAIQPAAGAPTPSQ---PGPPEHDKIILQFGKVSE 398
           FRGRVTVASVKNFQLIAA QPAAGAPTPSQ   P PPEHDK+ILQFGKV++
Sbjct: 361 FRGRVTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAK 409

[Close]

BLAST of Cla013055 vs. Swiss-Prot
Match: TLP3_ORYSJ (Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 5.6e-156
Identity = 279/417 (66.91%), Postives = 326/417 (78.18%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLS------GHHRGKSNASSLNDLHDQPPVVQNGCW 60
           MSFRSIVRDVRD  GSLSRR FEV L+      GHH+GK+  SSL++L D P ++    W
Sbjct: 1   MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQ-SSLDELDDSPAIIPESRW 60

Query: 61  ASLPPELLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVS 120
           ASLPPELL +VIRRLE  E+TWPSR+NVV  AAVCR+WR MC E V  PE CGKLTFPVS
Sbjct: 61  ASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVS 120

Query: 121 LKQPGPRDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISM 180
           +KQPGPRDG +QC+IKR++S  TYHLYLCLS  +  E GKF+L+AKR R+TT TEY ISM
Sbjct: 121 IKQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISM 180

Query: 181 DAENISRSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPT 240
            + NISRSS + IGKLRSNFLGTKFI+YDTQPPY  A +P  G+TS+RF S KVSPKVP+
Sbjct: 181 VSGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVVPHVGRTSKRFNSTKVSPKVPS 240

Query: 241 GSYNIAHISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRS- 300
            +YNIA +SYELNVLGTRGPRRM C+MHSIP SS++ GG VPGQPE + P +L+DSFRS 
Sbjct: 241 VTYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRST 300

Query: 301 ----------ASFSKA-LDHSMEFSSARFSEIGRAALDGDEEG--KMRPLVLKNKPPRWH 360
                      SFSK+ +D SM+FSSARFS+I  + + GD+ G  K RPLVL+NKPPRWH
Sbjct: 301 TSFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWH 360

Query: 361 EQLQCWCLNFRGRVTVASVKNFQLIAA-IQPAAGAPTPSQPGPPEHDKIILQFGKVS 397
           EQLQCWCLNFRGRVT+ASVKNFQL+AA   P AGAPTPSQPGP + +K+ILQFGKV+
Sbjct: 361 EQLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGPADPEKVILQFGKVA 416

[Close]

BLAST of Cla013055 vs. TrEMBL
Match: A0A0A0L6H9_CUCSA (Tubby-like F-box protein OS=Cucumis sativus GN=Csa_3G209470 PE=3 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 8.2e-231
Identity = 394/397 (99.24%), Postives = 396/397 (99.75%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE
Sbjct: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP
Sbjct: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS
Sbjct: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240
           RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA
Sbjct: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240

Query: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAL 300
           HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKA+
Sbjct: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAI 300

Query: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360
           DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK
Sbjct: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360

Query: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKV +
Sbjct: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVGK 397

[Close]

BLAST of Cla013055 vs. TrEMBL
Match: M5XC00_PRUPE (Tubby-like F-box protein OS=Prunus persica GN=PRUPE_ppa006177mg PE=3 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 2.8e-194
Identity = 341/397 (85.89%), Postives = 363/397 (91.44%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRD  GSLSRRGFEV+L GHHRGKS+ S LNDLHDQP +VQN  WASLPPE
Sbjct: 1   MSFRSIVRDVRDGFGSLSRRGFEVRLMGHHRGKSHGS-LNDLHDQPLIVQNSRWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LLYDVIRRLEESE+TWPSR++VVACA+VCRSWR MC EIVK PEICGKLTFPVSLKQPGP
Sbjct: 61  LLYDVIRRLEESESTWPSRRHVVACASVCRSWRTMCKEIVKSPEICGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDG VQCFIKRDKSNLTYHL+LCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDA+NIS
Sbjct: 121 RDGLVQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240
           RSS++YIGKLRSNFLGTKFIVYDTQP YT+  +PPPG+TSRRF SKKVSPKVPTGSYNIA
Sbjct: 181 RSSNAYIGKLRSNFLGTKFIVYDTQPAYTSEHIPPPGRTSRRFNSKKVSPKVPTGSYNIA 240

Query: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAL 300
            I+YELNVLGTRGPRRMHCIMHSIPVSSLDAGG+VPGQPELL   SL+DSFRS SFSK+L
Sbjct: 241 QITYELNVLGTRGPRRMHCIMHSIPVSSLDAGGSVPGQPELL-TRSLEDSFRSVSFSKSL 300

Query: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360
           DHS+EFSSARFSEI       DE+GK RPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK
Sbjct: 301 DHSVEFSSARFSEI--VGPRDDEDGKTRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360

Query: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           NFQLIAA QPAAGAPTPSQP PPE DKIILQFGKV +
Sbjct: 361 NFQLIAATQPAAGAPTPSQPTPPELDKIILQFGKVGK 393

[Close]

BLAST of Cla013055 vs. TrEMBL
Match: A0A0B2RMC9_GLYSO (Tubby-like F-box protein OS=Glycine soja GN=glysoja_005526 PE=3 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 4.7e-194
Identity = 332/399 (83.21%), Postives = 369/399 (92.48%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRDS GSLSRR F+V+L+GHHRGKS  S + DLHDQP V+QN  WASLPPE
Sbjct: 1   MSFRSIVRDVRDSFGSLSRRSFDVRLTGHHRGKSQGS-VQDLHDQPLVIQNSRWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LL+D+IRRLEESENTWP+RK+VVACAAVC+SWR MC +IVK PE CGKLTFPVSLKQPGP
Sbjct: 61  LLFDIIRRLEESENTWPARKHVVACAAVCQSWRNMCKDIVKSPEFCGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDG +QCFIKRDKSNLTYHL+LCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDA+NIS
Sbjct: 121 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPP--GKTSRRFYSKKVSPKVPTGSYN 240
           RSS++YIGKLRSNFLGTKFI+YDTQPPY++A + PP  GKTSRRFYSKKVSPKVP+GSYN
Sbjct: 181 RSSNTYIGKLRSNFLGTKFIIYDTQPPYSSAHICPPGTGKTSRRFYSKKVSPKVPSGSYN 240

Query: 241 IAHISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSK 300
           IA ++YELNVLGTRGPR+MHC+MHSIP S+LDAGGTVPGQPELL P SL+DSFRS SFSK
Sbjct: 241 IAQVTYELNVLGTRGPRKMHCVMHSIPASALDAGGTVPGQPELL-PRSLEDSFRSISFSK 300

Query: 301 ALDHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 360
           +LDHS+EFSS+RFSEIG + ++ D++GKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS
Sbjct: 301 SLDHSIEFSSSRFSEIGESCIE-DDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 360

Query: 361 VKNFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           VKNFQLIAA QPAAGAPTPSQP PPEHDKIILQFGKV +
Sbjct: 361 VKNFQLIAATQPAAGAPTPSQPAPPEHDKIILQFGKVGK 396

[Close]

BLAST of Cla013055 vs. TrEMBL
Match: I1MDS7_SOYBN (Tubby-like F-box protein OS=Glycine max GN=GLYMA_15G049500 PE=3 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 4.7e-194
Identity = 332/399 (83.21%), Postives = 369/399 (92.48%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRDS GSLSRR F+V+L+GHHRGKS  S + DLHDQP V+QN  WASLPPE
Sbjct: 1   MSFRSIVRDVRDSFGSLSRRSFDVRLTGHHRGKSQGS-VQDLHDQPLVIQNSRWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LL+D+IRRLEESENTWP+RK+VVACAAVC+SWR MC +IVK PE CGKLTFPVSLKQPGP
Sbjct: 61  LLFDIIRRLEESENTWPARKHVVACAAVCQSWRNMCKDIVKSPEFCGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDG +QCFIKRDKSNLTYHL+LCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDA+NIS
Sbjct: 121 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPP--GKTSRRFYSKKVSPKVPTGSYN 240
           RSS++YIGKLRSNFLGTKFI+YDTQPPY++A + PP  GKTSRRFYSKKVSPKVP+GSYN
Sbjct: 181 RSSNTYIGKLRSNFLGTKFIIYDTQPPYSSAHICPPGTGKTSRRFYSKKVSPKVPSGSYN 240

Query: 241 IAHISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSK 300
           IA ++YELNVLGTRGPR+MHC+MHSIP S+LDAGGTVPGQPELL P SL+DSFRS SFSK
Sbjct: 241 IAQVTYELNVLGTRGPRKMHCVMHSIPASALDAGGTVPGQPELL-PRSLEDSFRSISFSK 300

Query: 301 ALDHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 360
           +LDHS+EFSS+RFSEIG + ++ D++GKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS
Sbjct: 301 SLDHSIEFSSSRFSEIGESCIE-DDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 360

Query: 361 VKNFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           VKNFQLIAA QPAAGAPTPSQP PPEHDKIILQFGKV +
Sbjct: 361 VKNFQLIAATQPAAGAPTPSQPAPPEHDKIILQFGKVGK 396

[Close]

BLAST of Cla013055 vs. TrEMBL
Match: D9ZJE3_MALDO (Tubby-like F-box protein OS=Malus domestica GN=TLP6 PE=2 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 3.0e-193
Identity = 340/397 (85.64%), Postives = 363/397 (91.44%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRD  GSLSRRGFEV+L+GHHRGKS+ S LNDLHDQP +VQN  WASLPPE
Sbjct: 1   MSFRSIVRDVRDGFGSLSRRGFEVRLTGHHRGKSHGS-LNDLHDQPLIVQNSRWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LLYDVIRRLEESE+TWPSRK+VVACA+VCRSWRIMC EIVK PEICGKLTFPVSLKQPGP
Sbjct: 61  LLYDVIRRLEESESTWPSRKHVVACASVCRSWRIMCKEIVKKPEICGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDG VQCFIKRDKSNLTYHL+LCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDA+NIS
Sbjct: 121 RDGLVQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240
           RSSSSYIGKLRSNFLGTKFIVYDTQP YT+  +PPPG++SRRF SKKVSPKVPTGSYNIA
Sbjct: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPAYTSEHVPPPGRSSRRFNSKKVSPKVPTGSYNIA 240

Query: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAL 300
            I+YELNVLGTRGPRRMHCIMHSIPVSSLDAG TVPGQPELL   +L+DSFRS SFSK+L
Sbjct: 241 QIAYELNVLGTRGPRRMHCIMHSIPVSSLDAGSTVPGQPELL-TRALEDSFRSISFSKSL 300

Query: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360
           DHS+EFSS+RFSEI  A    DE+ K RPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK
Sbjct: 301 DHSVEFSSSRFSEI--AGPRDDEDSKTRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360

Query: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           NFQLIAA QPAA APTPSQP PP+ DKIILQFGKV +
Sbjct: 361 NFQLIAATQPAASAPTPSQPAPPDLDKIILQFGKVGK 393

[Close]

BLAST of Cla013055 vs. NCBI nr
Match: gi|778680121|ref|XP_004140690.2| (PREDICTED: tubby-like F-box protein 8 [Cucumis sativus])

HSP 1 Score: 807.4 bits (2084), Expect = 1.2e-230
Identity = 394/397 (99.24%), Postives = 396/397 (99.75%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE
Sbjct: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP
Sbjct: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS
Sbjct: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240
           RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA
Sbjct: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240

Query: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAL 300
           HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKA+
Sbjct: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAI 300

Query: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360
           DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK
Sbjct: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360

Query: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKV +
Sbjct: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVGK 397

[Close]

BLAST of Cla013055 vs. NCBI nr
Match: gi|659112194|ref|XP_008456108.1| (PREDICTED: tubby-like F-box protein 8 [Cucumis melo])

HSP 1 Score: 803.5 bits (2074), Expect = 1.7e-229
Identity = 392/397 (98.74%), Postives = 395/397 (99.50%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRDSIGSLSRRGFEVKL+GHHRGKSNASS NDLHDQPPVVQNGCWASLPPE
Sbjct: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLNGHHRGKSNASSPNDLHDQPPVVQNGCWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP
Sbjct: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS
Sbjct: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240
           RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA
Sbjct: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240

Query: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAL 300
           HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKA+
Sbjct: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAI 300

Query: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360
           DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK
Sbjct: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360

Query: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKV +
Sbjct: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVGK 397

[Close]

BLAST of Cla013055 vs. NCBI nr
Match: gi|645223881|ref|XP_008218843.1| (PREDICTED: tubby-like F-box protein 8 [Prunus mume])

HSP 1 Score: 688.3 bits (1775), Expect = 8.0e-195
Identity = 343/397 (86.40%), Postives = 363/397 (91.44%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRD  GSLSRRGFEV+L GHHRGKS+ S LNDLHDQP +VQN  WASLPPE
Sbjct: 1   MSFRSIVRDVRDGFGSLSRRGFEVRLMGHHRGKSHGS-LNDLHDQPLIVQNSRWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LLYDVIRRLEESE+TWPSRK+VVACA+VCRSWR MC EIVK PEICGKLTFPVSLKQPGP
Sbjct: 61  LLYDVIRRLEESESTWPSRKHVVACASVCRSWRTMCKEIVKSPEICGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDG VQCFIKRDKSNLTYHL+LCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDA+NIS
Sbjct: 121 RDGLVQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240
           RSSS+YIGKLRSNFLGTKFIVYDTQP YT+  +PPPG+TSRRF SKKVSPKVPTGSYNIA
Sbjct: 181 RSSSAYIGKLRSNFLGTKFIVYDTQPAYTSEHIPPPGRTSRRFNSKKVSPKVPTGSYNIA 240

Query: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAL 300
            I+YELNVLGTRGPRRMHCIMHSIPVSSLDAGG+VPGQPELL   SL+DSFRS SFSK+L
Sbjct: 241 QITYELNVLGTRGPRRMHCIMHSIPVSSLDAGGSVPGQPELL-TRSLEDSFRSVSFSKSL 300

Query: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360
           DHS+EFSSARFSEI       DE+GK RPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK
Sbjct: 301 DHSVEFSSARFSEI--VGPRDDEDGKTRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360

Query: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           NFQLIAA QPAAGAPTPSQP PPE DKIILQFGKV +
Sbjct: 361 NFQLIAATQPAAGAPTPSQPTPPELDKIILQFGKVGK 393

[Close]

BLAST of Cla013055 vs. NCBI nr
Match: gi|596141363|ref|XP_007222448.1| (hypothetical protein PRUPE_ppa006177mg [Prunus persica])

HSP 1 Score: 686.0 bits (1769), Expect = 4.0e-194
Identity = 341/397 (85.89%), Postives = 363/397 (91.44%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRD  GSLSRRGFEV+L GHHRGKS+ S LNDLHDQP +VQN  WASLPPE
Sbjct: 1   MSFRSIVRDVRDGFGSLSRRGFEVRLMGHHRGKSHGS-LNDLHDQPLIVQNSRWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LLYDVIRRLEESE+TWPSR++VVACA+VCRSWR MC EIVK PEICGKLTFPVSLKQPGP
Sbjct: 61  LLYDVIRRLEESESTWPSRRHVVACASVCRSWRTMCKEIVKSPEICGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDG VQCFIKRDKSNLTYHL+LCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDA+NIS
Sbjct: 121 RDGLVQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTCTEYVISMDADNIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPPGKTSRRFYSKKVSPKVPTGSYNIA 240
           RSS++YIGKLRSNFLGTKFIVYDTQP YT+  +PPPG+TSRRF SKKVSPKVPTGSYNIA
Sbjct: 181 RSSNAYIGKLRSNFLGTKFIVYDTQPAYTSEHIPPPGRTSRRFNSKKVSPKVPTGSYNIA 240

Query: 241 HISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSKAL 300
            I+YELNVLGTRGPRRMHCIMHSIPVSSLDAGG+VPGQPELL   SL+DSFRS SFSK+L
Sbjct: 241 QITYELNVLGTRGPRRMHCIMHSIPVSSLDAGGSVPGQPELL-TRSLEDSFRSVSFSKSL 300

Query: 301 DHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360
           DHS+EFSSARFSEI       DE+GK RPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK
Sbjct: 301 DHSVEFSSARFSEI--VGPRDDEDGKTRPLVLKNKPPRWHEQLQCWCLNFRGRVTVASVK 360

Query: 361 NFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           NFQLIAA QPAAGAPTPSQP PPE DKIILQFGKV +
Sbjct: 361 NFQLIAATQPAAGAPTPSQPTPPELDKIILQFGKVGK 393

[Close]

BLAST of Cla013055 vs. NCBI nr
Match: gi|571515999|ref|XP_006597337.1| (PREDICTED: tubby-like F-box protein 8 [Glycine max])

HSP 1 Score: 685.3 bits (1767), Expect = 6.8e-194
Identity = 332/399 (83.21%), Postives = 369/399 (92.48%), Query Frame = 1


Query: 1   MSFRSIVRDVRDSIGSLSRRGFEVKLSGHHRGKSNASSLNDLHDQPPVVQNGCWASLPPE 60
           MSFRSIVRDVRDS GSLSRR F+V+L+GHHRGKS  S + DLHDQP V+QN  WASLPPE
Sbjct: 1   MSFRSIVRDVRDSFGSLSRRSFDVRLTGHHRGKSQGS-VQDLHDQPLVIQNSRWASLPPE 60

Query: 61  LLYDVIRRLEESENTWPSRKNVVACAAVCRSWRIMCMEIVKGPEICGKLTFPVSLKQPGP 120
           LL+D+IRRLEESENTWP+RK+VVACAAVC+SWR MC +IVK PE CGKLTFPVSLKQPGP
Sbjct: 61  LLFDIIRRLEESENTWPARKHVVACAAVCQSWRNMCKDIVKSPEFCGKLTFPVSLKQPGP 120

Query: 121 RDGSVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRTTSTEYIISMDAENIS 180
           RDG +QCFIKRDKSNLTYHL+LCLSPALLVENGKFLLSAKRTRRTT TEY+ISMDA+NIS
Sbjct: 121 RDGIIQCFIKRDKSNLTYHLFLCLSPALLVENGKFLLSAKRTRRTTYTEYVISMDADNIS 180

Query: 181 RSSSSYIGKLRSNFLGTKFIVYDTQPPYTAAPLPPP--GKTSRRFYSKKVSPKVPTGSYN 240
           RSS++YIGKLRSNFLGTKFI+YDTQPPY++A + PP  GKTSRRFYSKKVSPKVP+GSYN
Sbjct: 181 RSSNTYIGKLRSNFLGTKFIIYDTQPPYSSAHICPPGTGKTSRRFYSKKVSPKVPSGSYN 240

Query: 241 IAHISYELNVLGTRGPRRMHCIMHSIPVSSLDAGGTVPGQPELLPPNSLDDSFRSASFSK 300
           IA ++YELNVLGTRGPR+MHC+MHSIP S+LDAGGTVPGQPELL P SL+DSFRS SFSK
Sbjct: 241 IAQVTYELNVLGTRGPRKMHCVMHSIPASALDAGGTVPGQPELL-PRSLEDSFRSISFSK 300

Query: 301 ALDHSMEFSSARFSEIGRAALDGDEEGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 360
           +LDHS+EFSS+RFSEIG + ++ D++GKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS
Sbjct: 301 SLDHSIEFSSSRFSEIGESCIE-DDDGKMRPLVLKNKPPRWHEQLQCWCLNFRGRVTVAS 360

Query: 361 VKNFQLIAAIQPAAGAPTPSQPGPPEHDKIILQFGKVSE 398
           VKNFQLIAA QPAAGAPTPSQP PPEHDKIILQFGKV +
Sbjct: 361 VKNFQLIAATQPAAGAPTPSQPAPPEHDKIILQFGKVGK 396

The following BLAST results are available for this feature:

BLAST of Cla013055 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TLP8_ORYSJ	2.2e-168	72.05	Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8 PE=2 SV=1	[more]
TLP14_ORYSJ	1.2e-161	69.16	Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica GN=TULP14 PE=2 SV=1	[more]
TLP10_ARATH	7.5e-161	70.84	Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1 SV=1	[more]
TLP13_ORYSJ	7.0e-159	68.86	Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica GN=TULP13 PE=2 SV=1	[more]
TLP3_ORYSJ	5.6e-156	66.91	Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3 PE=2 SV=1	[more]

BLAST of Cla013055 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6H9_CUCSA	8.2e-231	99.24	Tubby-like F-box protein OS=Cucumis sativus GN=Csa_3G209470 PE=3 SV=1	[more]
M5XC00_PRUPE	2.8e-194	85.89	Tubby-like F-box protein OS=Prunus persica GN=PRUPE_ppa006177mg PE=3 SV=1	[more]
A0A0B2RMC9_GLYSO	4.7e-194	83.21	Tubby-like F-box protein OS=Glycine soja GN=glysoja_005526 PE=3 SV=1	[more]
I1MDS7_SOYBN	4.7e-194	83.21	Tubby-like F-box protein OS=Glycine max GN=GLYMA_15G049500 PE=3 SV=1	[more]
D9ZJE3_MALDO	3.0e-193	85.64	Tubby-like F-box protein OS=Malus domestica GN=TLP6 PE=2 SV=1	[more]

BLAST of Cla013055 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680121\|ref\|XP_004140690.2\|	1.2e-230	99.24	PREDICTED: tubby-like F-box protein 8 [Cucumis sativus]	[more]
gi\|659112194\|ref\|XP_008456108.1\|	1.7e-229	98.74	PREDICTED: tubby-like F-box protein 8 [Cucumis melo]	[more]
gi\|645223881\|ref\|XP_008218843.1\|	8.0e-195	86.40	PREDICTED: tubby-like F-box protein 8 [Prunus mume]	[more]
gi\|596141363\|ref\|XP_007222448.1\|	4.0e-194	85.89	hypothetical protein PRUPE_ppa006177mg [Prunus persica]	[more]
gi\|571515999\|ref\|XP_006597337.1\|	6.8e-194	83.21	PREDICTED: tubby-like F-box protein 8 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000007	Tubby_C
IPR001810	F-box_dom
IPR018066	Tubby_C_CS
IPR025659	Tubby-like_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043090	amino acid import
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0010359	regulation of anion channel activity
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009620	response to fungus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla013055	Cla013055	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla013055	Cla013055.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla013055.1.cds1	Cla013055.1.cds1	CDS
Cla013055.1.cds2	Cla013055.1.cds2	CDS
Cla013055.1.cds3	Cla013055.1.cds3	CDS
Cla013055.1.cds4	Cla013055.1.cds4	CDS
Cla013055.1.cds5	Cla013055.1.cds5	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000007	Tubby, C-terminal	PRINTS	PR01573	SUPERTUBBY	coord: 236..263 score: 1.0E-57coord: 385..404 score: 1.0E-57coord: 170..186 score: 1.0E-57coord: 186..210 score: 1.0E-57coord: 332..349 score: 1.0E-57coord: 350..366 score: 1.0
IPR000007	Tubby, C-terminal	GENE3D	G3DSA:3.20.90.10		coord: 113..286 score: 4.7E-75coord: 322..397 score: 4.7
IPR000007	Tubby, C-terminal	PFAM	PF01167	Tub	coord: 118..397 score: 3.0
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 53..106 score: 1.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 45..97 score: 2.3
IPR018066	Tubby, C-terminal, conserved site	PROSITE	PS01200	TUB_1	coord: 350..363 scor
IPR025659	Tubby C-terminal-like domain	unknown	SSF54518	Tubby C-terminal domain-like	coord: 103..290 score: 1.7E-77coord: 326..397 score: 1.7
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 50..96 score: 1.
None	No IPR available	PANTHER	PTHR16517	TUBBY-RELATED	coord: 1..406 score: 8.2E
None	No IPR available	PANTHER	PTHR16517:SF45	SUBFAMILY NOT NAMED	coord: 1..406 score: 8.2E