CmoCh19G004420 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGTTATCAAGAGGCGCCGCCCAGAGCCGCCCTCCGTACATCCCCAGATCCTCCTCCTCCTCCGCCTCCTTCAAGGGCTGCTGCTGCTGCCTGTTCCTCCTCTTCTCCTTCCTAGCTCTCTTAATCCTCGCCGTCGTCCTTGTCGTCGTCCTCGCCCTAAAGCCAAAGAAGCCCCAATTCGATCTCCAGCAGGTGGGCATCCAGTACATGAACATAACCACTCCCAATCCCACCGCCGCCTCCCTTTCCCTCGACATTCGAATGATTTTCACCGCCGTTAACCCCAACAAAGTGGGAATCAAGTACGGGGAGTCTCGGTTCACGGTCATGTACCGAGGGATTCCACTTGGGAGAGCTTCAATTCCCGGATTCTTTCAAGACCCACATAGCCAACGCCAGGTCGACGCCACCATCGCCGTCGATCGTGTCAGCCTCCTCCAAGCCGACGCCGCTGATTTGATCCGTGACGCCTCGTTAAACGACCGTGTGGAGCTGAGGATACTCGGCGATGTTGCCGCTAAGATCCGCCTCTTGTCCTTTGATTCCCCCGGCGTTCAGGTACCACTAATCTCTCTAAGGGCATCCTTGTAATTTCATCATTCTAATGCTCTGCCCCTGTCCTGTCCTGTCCTGTCCTTCCCTGCCCTATTGTCTCTGCCATTTGTCCCCCATTTTAATGCTCTTTTTCCCCCACATTTCTAAATCCTCAAGGCCACATTATGCATGACTAGAAAAGATTTAGATAGTTGTACTAAAACCCAATTAGGATCGAGCTAAACTCATTTTAACGAAAACCCAATTCCGATCGAGTTAAACTCATTTTAACGAAAACCCAATTATGATCGAGCTGAACTCATTTTAACGAAAACCCTTTGATGTATGATTGTTTTATAGGATAATACGAACCATGAAAAGGATTTGTGTTAAAAACGAGAAACAGAAGTGAGATTGAAAGTGTTATCTAATCGTATACAAGCTACCTAACTATCAGTGATGGTTTAAAAAATTTGATGAATTCAGACTACCCACCCAAACTATAAAAGTTGAGTTGTATTAGATTTATTTGTTTTTTTGATTGAAAATCTAAAAATTCAATCCAGTTTGCTAGTTGACAATTTTTTTTATCGAGTCAATTAGACCAATTTAAAAATAGGGTTACAATCTAGTGCAACGTGACTTTTGGATGAATATTTGTTAATGTTTAGGTATGGGTGGATTGTGCAATTGTGATTAGTCCAAGGAAGCAATCTCTCACATACAAGCAATGTGGTTTTGATGGCTTAAATGTATGACTCACTCCCTCTTCCCTTCCCATCTAAAAAAATTCTTTCATTACTTTGTCTTTTAACCCCTTCGTTTCGGTTCCTAAATAATTAGGTCATTCAGTCTTTACCAATAATTCGAAGGGCTTAAATAGATGAAAATTTAGAGACTAAATTGAATACTTCAAGATTTTTTTAGAAACCCGAAGTGTGTAATATAGTGGAGTAAATTATATTAAATGAAATATAATTATAAATTTTATACAATATTAATAATGTATTAAAAAATAATAAATAAAATATTTAAATGTATATATAAAATAATTATTACAATAGAATACTTATTTATTTTTTATTAATTATAATTAGAATTTGAATCAATTAATTATACCCCTAAAATATATCTAATTGAAAAAAGAAAATAGTTATAAAAGAGAGAGAAACAATACTAAACTTATATAGTTGAAAAAAAAAAATAATGTGTAACAAACCTAAATTTTTATATATTTAGAGTCGTTATTGATGTCTCTTAACGTAGAAATATAACTCTTAAATGAACATTATTTATAGCATATACTTTGAAAACATTCGGAACAACCTTAAATTTCCAGAAAATACGGTCGGTTTTACGTGTTTCGAACAAAAACACCGGAATTTAAAACAATAAAAATAATTACAAAATAAAATAATTTAAATGATGAAATGCCATCATCCTATTCTAACCAAAGACTAGGAAATTAAATATGTGACTACCTTATGCACGTGCCACAGTCTCTATTTGCGATGCTGCTGTCATCCGTATATGAGCGTCTTGCCTTTACCTGAAAAATGATATGACACACATCTTGAGTATTGAAGAATACTCAGTAAGTGATCCCACTATAGGGGCCATGTTAATGCAAACACATGCAATCCTGCTCTTGGGACCTATCTTTATTCTCTTGGGGTGGCCTCTAGTCTCAGACTAATTTGGATGCGTAGTACTTCCCTACTCACGACCCACACGTGCGAGTGTGAATCCCTAGGGGGCTTGCACACCCCCTGGACCCTCTCCGGTCAAGCGAATCTGTAAGGACGTCCGAAGGTCAACTGAACCTCTTGGTGTCATGCTCCCCATGAACACACTCATCATCATACTGTGCGTTCGCACTCATCGTCTTTGAGGAAGTATTTCTATGCTTATAAACATTCAACATGCATGAGATCCCTCTAATGTCTACCGTATCATCTCTTCTGACACAATCCTCTAGTTTCATTTATTTGTTACATTAACACATGCTCGTGAATATGTATATTAATATCATTTTCATGCTCTTAGGGTTGTGTCCTATGTCGATCTATCGACATGATGCAATATGACACTCATAATCATAAAGCATGCTTAACATGAAAAACATCAACATATTAAGATAAACATCATGTAATCATCATACTCATCATAATGTCATCAAATGCATCAAACATATCATGTACGTCATGCATCGGAACATAAATCACGTGCATATAACATGCATCACAGCTCAAACATCATACTCATGCATCATCATAGCTGATACATCATCATGCTCGTAAATATAACTCTAACGCATACAATTTTCTAGCCTATCCTATAGTAAGGCCACTTCCTTGGTTGGCCTTGGCCGAAGTACCCCCTAATTAGCTAAACGTAAGCTCTCGTTCCTTGTGAGCTGCTCCAAACGTTGCTGGAGTTTGTTTCCTATCACATCGTTCGTCACCTTCCATTAGTATTTCACAATTAAATTAATAATGAATTAATTAACGTGAAATATGGCCCAAAATGACCTCAGTTACCTTAATCGGGGTCGAAAATAGTCCAAAAGAATCGAAACAGTGGAAACTAGGCCAAAATCAAAGAGTCGAGCCAAACAGCCGCTGGGAGCCTCCGGAGAGCCTTCGAAAAATTTGTCGGAGAGCCGCTGGAGGAAGACTACGAGCCGTCTAAGCTGAGACGGGCCGAGAGATTGCCTGTGTTGCTGGGTGCCACGTGGCAGCAACAAAGCGTGCCACATCGTATAGGCACTCTGGGTCGAGGCACGGGTCGAAGGCTGGTTCGGGTCATGTCTGCAGGCTAGCTTCTGGACTTTGATTCACGGGCTGGGCCGCAGGTGAGTTTGGGTCGTGGTCTTAAGGATATTTAGTAATAAATTATAATTTACCATATCTATTATATTTGATATTTTATTATTGTCTTTCTTACCATAAGTATCTTTCCATTTATTACTTTTTCCATAACCTTGTAATTTATTTGATTATAAATAAGATAACTTTCACACCATTTAGGTGTGGTGGATTAAACAAAAATTCTCATGGTATCAGAGCCTTTCGGTTTAGCAACTTCGATCCTTTATTTTTAATGGCTTATGAATCCCCTACTCATCTTCTTCTCCACCACCCCTGCTGGCTTTGATGTCGCAGGCGTAGTCTCCATGGCTGCCGCAAGCGGAGCCGATTGATTACTCTTCGCTCCACTCTTTTGACCTCCAAATCACTCTTCGTCATACTCTATACATACAACCTCACCTTAGCTAACATAGCCTCTCTCATTTTCTTTCCAATCTTCCCTTCATCCTTCGTCAAAACCCTAACCTAAACCTATCGACCTTTTGCAGAGATTTACCTTTGGAATCTGGGTGCCGCACTGGCCTTTTCGCCAACCAAGTCGCTGCCGCCCTTCTCTCCAAAATTGGCTCCTTCGCCCACTGTGGCGACTCTTCCGGCTTCAACATTGTCTTTGTCCCTTGCTCTAGGTTTCCCATTCTACTTCTTGGGTTAGACATATTCTCACCAGAGCCAAGGCAGCATCGTCGCTACCTCTGCAATTTTCGATGGCCAAGAAAGTGTTTCTCTATGCCTCCTCTGAACCAGGTTGTTGACATCTTCACGAAAAGTGTTTCTCAACCTCTCTTCGAATTTTTCAGATCCAAGCTTCACGTTCATTTAAATCCGACGCTCAGCTTGCGGTGAGGTGTTAAAGATATTTAGTAATAACTTATAATTTACCATATATATTATATTTGATATTTTATTATTGTCTTTCTTACCATAGGTATCTTTCCATGTATTACTCTTTCCATATTCTTATAATTTATTTGATTATAAATAAGATAACTTTCACACTATGTAGGTGTGGTGGTGGGCTACTGGGCCGAAAGATTTTTGGGTCGAGCTAGAATTTGGGCCTCGGGTTTGCAGGCTGGACCGCAAGTTTGGGCCGCTGAACTTGGGTCGTGGGTATCCGATTCGGGTTGACTCGGATTCGACTGATCCTTCTTCCTTACCCAGTTTGTCGCGATTTTCTTACGTCAATTTTCTCTCTCTTCTGTGCGGTGGTTTTCGACGTCTTTTTCGATCAATTCTAGCACCTTCCTCTTTGTCTCCGTTAGCTTACTCTTCCCTAAGGTATTTCGAGGTCGTTTTTTTGCTTGTGACGCAAATCCGTCATCTCAAATCTGGTTTTGAAACCTACGACTTATGTGCAGCGTCCGATCGCCCGACGGTGAAGGTCACGGCCTAAACGTGACGTATTTGGTATTCTCAATCATGTCCTCTCTCTTTTATACCATCCCTAGAGTTATCCTCACGTATTTTCTCATCGAATTGTGTTCACCGGAAACTTACAAATCCTTTCTCTCTCTCTTTCTGAGTTTTTCTCTGTTTGCAGGAGTTGTGGGAAATGGTTGAAGGCTGGGAGGTGTTGGCGATCCATGGAGTTCGCTGTTGTGTGA ATGCCGTTATCAAGAGGCGCCGCCCAGAGCCGCCCTCCGTACATCCCCAGATCCTCCTCCTCCTCCGCCTCCTTCAAGGGCTGCTGCTGCTGCCTGTTCCTCCTCTTCTCCTTCCTAGCTCTCTTAATCCTCGCCGTCGTCCTTGTCGTCGTCCTCGCCCTAAAGCCAAAGAAGCCCCAATTCGATCTCCAGCAGGTGGGCATCCAGTACATGAACATAACCACTCCCAATCCCACCGCCGCCTCCCTTTCCCTCGACATTCGAATGATTTTCACCGCCGTTAACCCCAACAAAGTGGGAATCAAGTACGGGGAGTCTCGGTTCACGGTCATGTACCGAGGGATTCCACTTGGGAGAGCTTCAATTCCCGGATTCTTTCAAGACCCACATAGCCAACGCCAGGTCGACGCCACCATCGCCGTCGATCGTGTCAGCCTCCTCCAAGCCGACGCCGCTGATTTGATCCGTGACGCCTCGTTAAACGACCGTGTGGAGCTGAGGATACTCGGCGATGTTGCCGCTAAGATCCGCCTCTTGTCCTTTGATTCCCCCGGCGTTCAGGTACCACTAATCTCTCTAAGGGCATCCTTCGTCCGATCGCCCGACGGTGAAGGTCACGGCCTAAACGTGACGAGTTGTGGGAAATGGTTGAAGGCTGGGAGGTGTTGGCGATCCATGGAGTTCGCTGTTGTGTGA ATGCCGTTATCAAGAGGCGCCGCCCAGAGCCGCCCTCCGTACATCCCCAGATCCTCCTCCTCCTCCGCCTCCTTCAAGGGCTGCTGCTGCTGCCTGTTCCTCCTCTTCTCCTTCCTAGCTCTCTTAATCCTCGCCGTCGTCCTTGTCGTCGTCCTCGCCCTAAAGCCAAAGAAGCCCCAATTCGATCTCCAGCAGGTGGGCATCCAGTACATGAACATAACCACTCCCAATCCCACCGCCGCCTCCCTTTCCCTCGACATTCGAATGATTTTCACCGCCGTTAACCCCAACAAAGTGGGAATCAAGTACGGGGAGTCTCGGTTCACGGTCATGTACCGAGGGATTCCACTTGGGAGAGCTTCAATTCCCGGATTCTTTCAAGACCCACATAGCCAACGCCAGGTCGACGCCACCATCGCCGTCGATCGTGTCAGCCTCCTCCAAGCCGACGCCGCTGATTTGATCCGTGACGCCTCGTTAAACGACCGTGTGGAGCTGAGGATACTCGGCGATGTTGCCGCTAAGATCCGCCTCTTGTCCTTTGATTCCCCCGGCGTTCAGGTACCACTAATCTCTCTAAGGGCATCCTTCGTCCGATCGCCCGACGGTGAAGGTCACGGCCTAAACGTGACGAGTTGTGGGAAATGGTTGAAGGCTGGGAGGTGTTGGCGATCCATGGAGTTCGCTGTTGTGTGA
BLAST of CmoCh19G004420 vs. TrEMBL
Match: A0A0A0K5H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G223380 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.1e-82 Identity = 168/203 (82.76%), Postives = 179/203 (88.18%), Query Frame = 1
BLAST of CmoCh19G004420 vs. TrEMBL
Match: A0A061DZ99_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 OS=Theobroma cacao GN=TCM_006430 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.5e-75 Identity = 156/220 (70.91%), Postives = 175/220 (79.55%), Query Frame = 1
BLAST of CmoCh19G004420 vs. TrEMBL
Match: A0A061DYB0_THECC (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_006430 PE=4 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 4.7e-74 Identity = 148/193 (76.68%), Postives = 165/193 (85.49%), Query Frame = 1
BLAST of CmoCh19G004420 vs. TrEMBL
Match: M5Y567_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010161mg PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 6.1e-74 Identity = 156/219 (71.23%), Postives = 176/219 (80.37%), Query Frame = 1
BLAST of CmoCh19G004420 vs. TrEMBL
Match: W9RV36_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024155 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 4.0e-73 Identity = 147/190 (77.37%), Postives = 166/190 (87.37%), Query Frame = 1
BLAST of CmoCh19G004420 vs. TAIR10
Match: AT2G01080.1 (AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 264.6 bits (675), Expect = 5.6e-71 Identity = 136/187 (72.73%), Postives = 163/187 (87.17%), Query Frame = 1
BLAST of CmoCh19G004420 vs. NCBI nr
Match: gi|659092733|ref|XP_008447190.1| (PREDICTED: uncharacterized protein LOC103489700 isoform X1 [Cucumis melo]) HSP 1 Score: 319.3 bits (817), Expect = 5.5e-84 Identity = 166/181 (91.71%), Postives = 174/181 (96.13%), Query Frame = 1
BLAST of CmoCh19G004420 vs. NCBI nr
Match: gi|659092735|ref|XP_008447191.1| (PREDICTED: uncharacterized protein LOC103489700 isoform X2 [Cucumis melo]) HSP 1 Score: 318.2 bits (814), Expect = 1.2e-83 Identity = 170/203 (83.74%), Postives = 180/203 (88.67%), Query Frame = 1
BLAST of CmoCh19G004420 vs. NCBI nr
Match: gi|449444084|ref|XP_004139805.1| (PREDICTED: uncharacterized protein LOC101207234 [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 3.0e-82 Identity = 168/203 (82.76%), Postives = 179/203 (88.18%), Query Frame = 1
BLAST of CmoCh19G004420 vs. NCBI nr
Match: gi|590683364|ref|XP_007041580.1| (Late embryogenesis abundant hydroxyproline-rich glycoprotein family isoform 1 [Theobroma cacao]) HSP 1 Score: 290.0 bits (741), Expect = 3.6e-75 Identity = 156/220 (70.91%), Postives = 175/220 (79.55%), Query Frame = 1
BLAST of CmoCh19G004420 vs. NCBI nr
Match: gi|658008149|ref|XP_008339262.1| (PREDICTED: uncharacterized protein LOC103402303 [Malus domestica]) HSP 1 Score: 285.8 bits (730), Expect = 6.7e-74 Identity = 155/212 (73.11%), Postives = 174/212 (82.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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