Cla012989 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGCAAATGGAAACGAGGCGTATGAAAAAGCAGTGTGTGGTGTTATTGGGATTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTGCAAAATGGCAAATCCGTGTTGTGAATCGGCTAAGCAATGGCCAAATCCTGTTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACATAAGCTTAGTGTTGGATCTGAATTCAATTGGAAATTTAAAGTAAACTTTTGGAATACCACATTATTTTGGTGTTACCTGCAGAAGCCGAATGGACTACGTTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCGGTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATAGCAAAAGATGACGGAATTTATTTGAAGGACAACACTAATCAAAAAGATGTTTTGATCGTAAGTGGGAATAATTATGCACCAACAACACATCACTCCATTATTATATGTGGCTTGTTGGGATTAATATATATGGTATTTATTAATATAAAGAAAGGTTTTGATGCTCACATCTTGTTTTTCTTTCGGTTTATAAATTATTGCACAAGTTTATTTTTGTTTCTAGTTTTTCTTTCCCATGATATTAATCTAAGAGAAATATAGTTTACTAAATCTCAAACTAATCTCTCTTGAAATCTAATTCGACGAGTGAACAAGTTTCAAAGAAGTTAATTAAGCAAAGGGTAGGAGAATCTTAATAAAGTTTCTACTTCACAAGTTTTGAAATGTAGTATTTCCTTGGATTTAATATTAATAAGTCCATAATCTTATTCTTTCACATATATTAACCAAAACTTTTTTAATGAGTTTTAATCAGAAAAGAAATTGAGAATGAAGACGAAAAATAAAGAAAAGAGAAGTGACCATAGTTTTAAATCGGTAATTGATTGTATTATAGCCACTTTTTATAGATTAGTTAGCTAGTTTGAGACTTCTATCTTCGAAAAGAGTAACATAATTTTGTATAAAAATTAAATTAAAAATTGTCCTCATCAAGTGATCCTTTTGTTATTAAGCCTTGGTTAGATTTTTTCCATATGGGTTTCAATGATCATGTCACACCCCGCCCCGGGTTACTTCCCCCGCAGCCCGAGACGGAGTGTGAGGACAATAGATATCGACCCTCTTGCAATGTTTACCGTCAAACCCTACCTTTCCCGAAACTACCATATGCAACCTATACAGGTATAGCCAAACTCATCAAGATAGTCAACGATTCACACACATCTAGACTTCTATGTGCGCACATAGTTCCTACTACTTACCATCAGGGCTTAGGAGCTAAGCCCGTCAACCCTCTAACCATCCCACGAGGAAAATCCGCGCTACAGACTCAGGAACTAGGTCCGTTTGACCCCTTGACCATTCTGTGCGGTAACAAGTCCCGGTCCACTCACGACCGTCAACAATAA ATGATGAAGCAAATGGAAACGAGGCGTATGAAAAAGCAGTGTGTGGTGTTATTGGGATTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTGCAAAATGGCAAATCCGTGTTGTGAATCGGCTAAGCAATGGCCAAATCCTGTTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACATAAGCTTAGTGTTGGATCTGAATTCAATTGGAAATTTAAAGTAAACTTTTGGAATACCACATTATTTTGGTGTTACCTGCAGAAGCCGAATGGACTACGTTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCGGTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATAGCAAAAGATGACGGAATTTATTTGAAGGACAACACTAATCAAAAAGATGTTTTGATCCCCGAGACGGAGTGTGAGGACAATAGATATCGACCCTCTTGCAATGTTTACCGTCAAACCCTACCTTTCCCGAAACTACCATATGCAACCTATACAGGTATAGCCAAACTCATCAAGATAGTCAACGATTCACACACATCTAGACTTCTATGTGCGCACATAGTTCCTACTACTTACCATCAGGGCTTAGGAGCTAAGCCCGTCAACCCTCTAACCATCCCACGAGGAAAATCCGCGCTACAGACTCAGGAACTAGGTCCGTTTGACCCCTTGACCATTCTGTGCGGTAACAAGTCCCGGTCCACTCACGACCGTCAACAATAA ATGATGAAGCAAATGGAAACGAGGCGTATGAAAAAGCAGTGTGTGGTGTTATTGGGATTGTTGTGTTTGGCAGTGCTTGAAGAAACCAAGGCTGCGGAGCTTGCAAAATGGCAAATCCGTGTTGTGAATCGGCTAAGCAATGGCCAAATCCTGTTGGTTCATTGCAAATCCAAAGACAATGATTTAGGAGAACATAAGCTTAGTGTTGGATCTGAATTCAATTGGAAATTTAAAGTAAACTTTTGGAATACCACATTATTTTGGTGTTACCTGCAGAAGCCGAATGGACTACGTTCGTCATTCGAAGCCTTTTGGATTGAGAGCACATCGGTTTGGCTCTATGATATGTGCTACGATTCTAACTGCATTTGGATAGCAAAAGATGACGGAATTTATTTGAAGGACAACACTAATCAAAAAGATGTTTTGATCCCCGAGACGGAGTGTGAGGACAATAGATATCGACCCTCTTGCAATGTTTACCGTCAAACCCTACCTTTCCCGAAACTACCATATGCAACCTATACAGGTATAGCCAAACTCATCAAGATAGTCAACGATTCACACACATCTAGACTTCTATGTGCGCACATAGTTCCTACTACTTACCATCAGGGCTTAGGAGCTAAGCCCGTCAACCCTCTAACCATCCCACGAGGAAAATCCGCGCTACAGACTCAGGAACTAGGTCCGTTTGACCCCTTGACCATTCTGTGCGGTAACAAGTCCCGGTCCACTCACGACCGTCAACAATAA MMKQMETRRMKKQCVVLLGLLCLAVLEETKAAELAKWQIRVVNRLSNGQILLVHCKSKDNDLGEHKLSVGSEFNWKFKVNFWNTTLFWCYLQKPNGLRSSFEAFWIESTSVWLYDMCYDSNCIWIAKDDGIYLKDNTNQKDVLIPETECEDNRYRPSCNVYRQTLPFPKLPYATYTGIAKLIKIVNDSHTSRLLCAHIVPTTYHQGLGAKPVNPLTIPRGKSALQTQELGPFDPLTILCGNKSRSTHDRQQ
BLAST of Cla012989 vs. TrEMBL
Match: A0A0A0K6N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G336430 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.3e-33 Identity = 68/125 (54.40%), Postives = 86/125 (68.80%), Query Frame = 1
BLAST of Cla012989 vs. TrEMBL
Match: V4VUI1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022738mg PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28 Identity = 65/150 (43.33%), Postives = 91/150 (60.67%), Query Frame = 1
BLAST of Cla012989 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 7.2e-28 Identity = 69/145 (47.59%), Postives = 85/145 (58.62%), Query Frame = 1
BLAST of Cla012989 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 5.7e-25 Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 1
BLAST of Cla012989 vs. TrEMBL
Match: A0A0D2U1W3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G390100 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.2e-24 Identity = 62/138 (44.93%), Postives = 79/138 (57.25%), Query Frame = 1
BLAST of Cla012989 vs. NCBI nr
Match: gi|659124369|ref|XP_008462123.1| (PREDICTED: uncharacterized protein LOC103500552 [Cucumis melo]) HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39 Identity = 80/149 (53.69%), Postives = 108/149 (72.48%), Query Frame = 1
BLAST of Cla012989 vs. NCBI nr
Match: gi|778730341|ref|XP_011659760.1| (PREDICTED: uncharacterized protein LOC105436265 [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 3.9e-35 Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = 1
BLAST of Cla012989 vs. NCBI nr
Match: gi|778726822|ref|XP_004139670.2| (PREDICTED: uncharacterized protein LOC101212063 [Cucumis sativus]) HSP 1 Score: 150.2 bits (378), Expect = 4.8e-33 Identity = 68/125 (54.40%), Postives = 86/125 (68.80%), Query Frame = 1
BLAST of Cla012989 vs. NCBI nr
Match: gi|659123189|ref|XP_008461539.1| (PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]) HSP 1 Score: 148.3 bits (373), Expect = 1.8e-32 Identity = 75/143 (52.45%), Postives = 94/143 (65.73%), Query Frame = 1
BLAST of Cla012989 vs. NCBI nr
Match: gi|659116359|ref|XP_008458036.1| (PREDICTED: uncharacterized protein LOC103497573 [Cucumis melo]) HSP 1 Score: 148.3 bits (373), Expect = 1.8e-32 Identity = 66/128 (51.56%), Postives = 85/128 (66.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|