CmoCh13G000870 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh13G000870
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr13 : 526617 .. 531890 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTGCAGTGGGCGATATCATGGAGGTCTCTGTAGTATACAGAAGGCCGCATCGATCGAGGTCCAATGGTAGCAAGTTAGCGTGATGTGCTAGTTTTCAGAGAGAGTTCACTTTGTGCTTTGAAGGCGAAATCTCTGTATTTTCTCCATGATTTTGAGATGAACAAGAAGCATGAATACAAAGCACAAGCTCTTCTGCAAAATCGCGGATGCGATGGATGCTGCTGCTAGGGCCAAAATTTCCGATCTTCTTCATCGCAATCCCTCATATATCTGTTTGGCTGGAAAGAAAATGCCGGTATAACATCTAGTTACTTACTTCGTCTTGACGTCGAATTCATGATTGCGGTTTCCAAATGCTTCGCGATGTGACTAGGGATCTTGGAGCCATGATTTCAATTACTTTTAGTTGATCAATTGTAATTGTTTGAAATTTGTTATATCTTTTCCATCTAATCGCTTATCTGTTTCTGTTGTTCTTTAATCAAGCAGTTAAATCATGTAAGGAAATTCGTTCCTTCAGTCATCATGAAGTTTGAAGCCCGATATGTTCTTGATGGTCGAGGAAGTTCGACTGCTGAAGCGGACTTGTATTATTCGTCTGCATCAATTCCACAGGCATGTAAGGTTCCCTGGAAATTAAAATTAATCTGTCTGCTAAGAAACATAATTATCGTTAAAGCCAGGCATCAAATTGTTTTGGAATTGAATTAACCTAATTTTATCGTGAAATTTGAAGTCTAGGCTACCCCTAAGGTTCTCTTAACTAAGTTTTTGTTTATGCTGTTTTTAGTAATCTGAATTCATTAGGATAATCAACTCTGAGTTGAACATTATACATACCATTGGTTCTTAGTAGAAGAACAATGGTAAAATTACCCTGAATCGGACTCGTCCGATGATTATTGATTAAACACATAAGATTGGAGCGTCGATTCTCTTCTCAATATGAAAGGACAACTCTCAATGTATACTGATTTGAGTCAGAAACTCGTTGCCATCTATCCGGCTCTCCGCTCTTGAAATTTTGCTCAACGATAATGGTATTTTGTCTTGGACAGTTTTGGTTGGAATATGATCATGCCTGGAGACATTCATGATTTATTATCCTTGATTTTAGTGAAAGGAAATGCCAGAGCATTGTGACTAGCCTTTAACCATTAGTATCCTTATAAAGATTATAATATTTATTTTTATATAATTGGAGATCTTTTTGGTTATCCACCGATGGTGGTTTGGGGTTTCTTATCCCTCTTGATTATTTCATTGATCTGTTTCTTTCTCAAAAAAATGTTTGCTGATATTGAGTCACACGGCTTGAAGAGCTTCTTTCTAGAGGGTAGTGCTGAATTCCTCATAGCCATTTTATTTGGAATCGGTAATGGTGGCACTTTCTCTATTTTGTCTTCCTATGTTCTTTGCTATCTTTGGCGAAAAGGAACTTTTGAGTCCGCATATGCAAATGGTGACGTTCGATGGTTCCACTTCCTCGGACAATGTATTTGCGAATGTGTTAATTATGATATCTCTGCAGTATGAAGTTCGAGCAGATGCTATATTACTTGTGTGACATCGGTTTTAAAAACTTTGAGGAGAAGCTCGAAAGGGAAAATCTAAAGAGGACAATATTTGCTAGTAGTAAGCTTGGACGGTTACAAATGGTATTAGAATTACACACTGGGCGATGTGCCAGCGAGGAGGTTGAGCCTCAAAGGGGTTGGAAAATGAGGCAGTGTGTCTATGCTGGCCCCAAAGGAGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGCAGAACAAAACATTATTTATAAGGGTGTAGAAGCCTCGTTTTAAAAACTTTGAGTAAAAGCTCGAAAGAGAAAGCTCAAAGATGATAATATCTGCTAGCAGTTGGCTTGAGCTTTTTCACCTACCTTGCTTGTTTCTCACCGGCTAAAGAGAGTCGTGATTGGATTCTTGAAACTTAGGACATCCATTATATCATTTAGCATTTTTCATATGCTTTGATAGTTAACAGTTTTTGGCCTACTCTTGAGAAAATTTTTTGAAAAAAAAAAAAGGATATGGTGTTTTGACAGTGTTCGAGCTGAACCGAAAACCGAAAAAGAAGGTGGAATGCGAAAGACATGATGGAGGCGCTGCTGTAACACACAGGTATCCCCTTTTCTTAATTGATCTTTTTGATTTCCAAATCTAAATGTTAAAAAAGGGTTTCTAGATTGTTTTTCTTTCCGTGTGATTTAAAACCTTACACAACAAAAAAAGGGCTGTATGTGTAGTTTCGTTTTTCTTCAAGTTATTGGTAGCAGGTGTACTAAGAGTCTAGGATAACCCAATTAGATTCTCATAATGCACCTCAATATTATCTAAATGTTGTGACATGATATAAAAATGATATGAAATAGGTAATGGTACGAGATATGTGATAAATTGACATATTTATAATATGATATATTGTGATGCGATATGATATGTTATGGTATATATATGATGAAATGTTATGTTAGAAGCATGAAATATTATGTTATGTTTTCTAGATTGTATATGATATGAATGACATAGAATCACAATAAATGACATGAAATATAACTCCGTTAGAATTATATATGATATGAGAACTGAAAAAATGGGAAATGACATAGTATAAAATGAGAAATGATAACGGGTTATATTTAATAATGTTGAAAATGGAAAAATATTGGGACCTCATGCATTATTTGTGCTCATGCATTGGGATACCCCTATTCCATCACGAGGGTACGGCCGCATACACCACTAGGCAAGTGAAGTATCATTATGTTTTACATAATGCTACCGTGACGATTACTAATTCTAATGGGTATCTAGCATAAGGAGCTACCAAAGAAGGCTCGCCCGACAAAAAGAGGGGACAACGATCTGCGAACTGTTTATTCGGACATATTTGACCCTTTGAGCTAATTGATACGATGCACCTTTACAAGATAAGGTTTGAAGGTCTACTTTCAACTCTTTTGGTGATACCTTTTTTAGGAACATAATATTTTGCTACTTTTGGCTTGATTCTTGTTGGCACTCTTTCCAACCTATACTGCTTCGGGCTAAAGATTTACTGTGTGCTTCTATTCCAAACCCACTTTACAGCCAAATTTACTTTCTTGAGCAGATTCTATTAGGCTCGTCAAATAACTTCATTCACTCCCATGAACTGAAGTGGCAATCTTGAATCCCTACTTTTTGGATTTGGTTTAAGGATTTCAAGCTCAAATACTCATATGACACCCTTTCCGGTTGATCTGTGTTATGTATCGCCGTCAGCCTCACGATTTTAAAACACTTTGATTACTGTCAGCCTCACGATTTTAAAACACCTCTGCTATGGGAAGGTTTCTACACTCTTATAAGAAATGTTTCATTTCCTTCTCCAACTGACATATGATCTCACAATCCATCCACTTGAGAGCTCAGAAGTTTCCACACTAATCCCCTTGAGAGTCCAGAAGTTTCCACACTTTTATAAGAAATGTTTCGTTCTCCGTTCCAACTGATGTGAGATCTCACAATCCACCCCCTTGAGAGCCTAGAGGTTTCCACACCTTTATAGGAAATATTTTGTTCCCCTCTCCAAACAACGTGAGCTCTCACAGTCCACCCCCCTTGGGGGGCCCAATATCCTTGCCGACACATCACTCGGTGTCTAGCTCTGATACCATTTATAATAACTCAAGTCTACTGCTAGCAGATATTATCCGTTTTGGCCTGTTACATATCGTTGTCAGCCTCGCAATTTTAAACACGTATGCTAGGAAGAGATTTCCATACTCTTATAAAGAATACTTCGTTTCCATACCTTTGAATCTCACATAAATGATAACATCTTCATCGATAAGAAACAACCTTTTGGATGAAATAAAATCAAATTCATATGAATGTGAAGGACCTTTTGTTCAAACTTTCAAGTGGATGTTGTCTGTCTTTGTTCTTAGTGGCACATGGGGCTTCACAAATATTGCTTTTTCTTTGATAGCAAAATTGCCTTTGTTATCCACTATTTAGCCCTTTCTTTGAATCAGTCTCGAGCTGTTGAGTTGCTTTCTCGGCAGCTCCACGCTAAAGTAGCACTAACTTCTCCCAAACACCCTAAATTGTTCCTCGTACTACATGATGCAAAAAAGATTTCCCAACACTTGTTCAAATCGCCTTTTTTTTTTATAAGAAAATATCTTATATTATTTTAATGCCTTTTTTTAATCGATATATACGAATACTATATATATATATATATCATGAATTACACCATTAGTTTAAAAGGATTTAATCAGATTTTAAAAGAATTTTAATCGATATAATCTTTCTTTGTCTTATTATTATTCTCAATTTTTGTTGAAGTACATATTTGGACTAAACTATGATAATTTCATTTTAATATGATGTGATGTGTTATATATATATATATAGAGTTTAGGCACACCCACAAAGTGAGATGATTGAATCTCAATAGATTCTCAATAGGTTTTGATTCGATGTTGAATACACATTTGTCCTCATTCTTAGGTGCACTCAAAAGAACTTGTATTTGGGACCCTCTGCCTTAGTGCCCATTGATTGATATATATAGTATAGTATGTTGCTATATTTGATTGTCAAAGGTGTAGTTGTCGTAGAGAAATAATTTTTATCGAATGTTTTGAAATAGAAAAGAAAAATAAGGAAAGTTATATTTGATCTAAATAACCTTATCTATGGTATGGTTGAGGTATGACTTTGTGTCTCACGTGATGAATGTGTTGTATTGGTCTTATTATATTGAATGGACCATATCATATAGATTTTATGAATTTAATACATGAAATTTTAATTTTTTTTTAATACAAATAAATAAAACTTAGAGGTTGAAAAACCTATCAACCGGTATAATTAACAATTTAGCTCTTATATTTTCAATTTTATAAGTATCTAATCTATAAATTTTAGTAGTAATAATTTAATTTTTTATTTTAAAATTGGTAACATTTTAGTCTCTATTATAAAAAAAAATTGGGTTAAAAATTAGTATTATGTCGTTGAATTTTAATTTTAATGAAAGTAATAATTTAGTTATTTAGTTTTAATATTTTCAATTTTTCACTCTACGATTAAATTTTTAAAAAAAATTTATTATCTTTTTATAAAAATTTAAAGACTTAGGAATTAAAAATTTTACAAAAATTAAATTATATTTGGAGTATAGTCTCACTCTCATCTCACAGACAAAACTGTGTCGTATCGACTGGTAGCTTCATGATCCTTAATTAA

mRNA sequence

TGTGCAGTGGGCGATATCATGGAGGTCTCTGTAGTATACAGAAGGCCGCATCGATCGAGGTCCAATGGTAGCAAGTTAGCGTGATGTGCTAGTTTTCAGAGAGAGTTCACTTTGTGCTTTGAAGGCGAAATCTCTGTATTTTCTCCATGATTTTGAGATGAACAAGAAGCATGAATACAAAGCACAAGCTCTTCTGCAAAATCGCGGATGCGATGGATGCTGCTGCTAGGGCCAAAATTTCCGATCTTCTTCATCGCAATCCCTCATATATCTGTTTGGCTGGAAAGAAAATGCCGTTAAATCATGTAAGGAAATTCGTTCCTTCAGTCATCATGAAGTTTGAAGCCCGATATGTTCTTGATGGTCGAGGAAGTTCGACTGCTGAAGCGGACTTGTATTATTCGTCTGCATCAATTCCACAGGCATTGTTCGAGCTGAACCGAAAACCGAAAAAGAAGGTGGAATGCGAAAGACATGATGGAGGCGCTGCTGTAACACACAGACAAAACTGTGTCGTATCGACTGGTAGCTTCATGATCCTTAATTAA

Coding sequence (CDS)

ATGAATACAAAGCACAAGCTCTTCTGCAAAATCGCGGATGCGATGGATGCTGCTGCTAGGGCCAAAATTTCCGATCTTCTTCATCGCAATCCCTCATATATCTGTTTGGCTGGAAAGAAAATGCCGTTAAATCATGTAAGGAAATTCGTTCCTTCAGTCATCATGAAGTTTGAAGCCCGATATGTTCTTGATGGTCGAGGAAGTTCGACTGCTGAAGCGGACTTGTATTATTCGTCTGCATCAATTCCACAGGCATTGTTCGAGCTGAACCGAAAACCGAAAAAGAAGGTGGAATGCGAAAGACATGATGGAGGCGCTGCTGTAACACACAGACAAAACTGTGTCGTATCGACTGGTAGCTTCATGATCCTTAATTAA
Homology
[Close]
BLAST of CmoCh13G000870 vs. Swiss-Prot
Match: ENO3_ARATH (Cytosolic enolase 3 OS=Arabidopsis thaliana GN=ENO3 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.2e-06
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 1 

Query: 4  KHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHVRKFVPSVIMKFEARYVL 63
          KH L  KI DA++AA RAK SD +      + +A      NH++K V SVI K +AR +L
Sbjct: 9  KHMLSRKIEDAVNAAVRAKTSDPV------LFIA------NHLKKAVSSVITKVKARQIL 68

Query: 64 DGRGSSTAEADLYYSS----ASIP 84
          D RG  T E DL+ +     AS+P
Sbjct: 69 DSRGIPTVEVDLHTNKGVFRASVP 80

[Close]
BLAST of CmoCh13G000870 vs. TAIR10
Match: AT2G29560.1 (AT2G29560.1 cytosolic enolase)

HSP 1 Score: 52.4 bits (124), Expect = 2.4e-07
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 1 

Query: 4  KHKLFCKIADAMDAAARAKISDLLHRNPSYICLAGKKMPLNHVRKFVPSVIMKFEARYVL 63
          KH L  KI DA++AA RAK SD +      + +A      NH++K V SVI K +AR +L
Sbjct: 9  KHMLSRKIEDAVNAAVRAKTSDPV------LFIA------NHLKKAVSSVITKVKARQIL 68

Query: 64 DGRGSSTAEADLYYSS----ASIP 84
          D RG  T E DL+ +     AS+P
Sbjct: 69 DSRGIPTVEVDLHTNKGVFRASVP 80

The following BLAST results are available for this feature:
BLAST of CmoCh13G000870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ENO3_ARATH4.2e-0642.86Cytosolic enolase 3 OS=Arabidopsis thaliana GN=ENO3 PE=1 SV=1[more]
BLAST of CmoCh13G000870 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of CmoCh13G000870 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G29560.12.4e-0742.86 cytosolic enolase[more]
BLAST of CmoCh13G000870 vs. NCBI nr
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G000870.1CmoCh13G000870.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh13G000870CmaCh13G000910Cucurbita maxima (Rimu)cmacmoB218
CmoCh13G000870ClCG03G001050Watermelon (Charleston Gray)cmowcgB184
CmoCh13G000870Cla97C03G051870Watermelon (97103) v2cmowmbB209
CmoCh13G000870Carg20625Silver-seed gourdcarcmoB0517
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh13G000870Cucurbita moschata (Rifu)cmocmoB173
CmoCh13G000870Cucurbita moschata (Rifu)cmocmoB180
CmoCh13G000870Cucurbita moschata (Rifu)cmocmoB189
CmoCh13G000870Cucumber (Gy14) v1cgycmoB0384
CmoCh13G000870Cucumber (Gy14) v1cgycmoB0402
CmoCh13G000870Cucurbita maxima (Rimu)cmacmoB458
CmoCh13G000870Cucurbita maxima (Rimu)cmacmoB577
CmoCh13G000870Wild cucumber (PI 183967)cmocpiB206
CmoCh13G000870Wild cucumber (PI 183967)cmocpiB214
CmoCh13G000870Wild cucumber (PI 183967)cmocpiB217
CmoCh13G000870Cucumber (Chinese Long) v2cmocuB204
CmoCh13G000870Cucumber (Chinese Long) v2cmocuB214
CmoCh13G000870Melon (DHL92) v3.5.1cmomeB178
CmoCh13G000870Melon (DHL92) v3.5.1cmomeB181
CmoCh13G000870Watermelon (Charleston Gray)cmowcgB180
CmoCh13G000870Watermelon (97103) v1cmowmB173
CmoCh13G000870Watermelon (97103) v1cmowmB197
CmoCh13G000870Cucurbita pepo (Zucchini)cmocpeB211
CmoCh13G000870Cucurbita pepo (Zucchini)cmocpeB202
CmoCh13G000870Cucurbita pepo (Zucchini)cmocpeB207
CmoCh13G000870Bottle gourd (USVL1VR-Ls)cmolsiB186
CmoCh13G000870Bottle gourd (USVL1VR-Ls)cmolsiB191
CmoCh13G000870Cucumber (Gy14) v2cgybcmoB069
CmoCh13G000870Melon (DHL92) v3.6.1cmomedB198
CmoCh13G000870Melon (DHL92) v3.6.1cmomedB203
CmoCh13G000870Silver-seed gourdcarcmoB0594
CmoCh13G000870Cucumber (Chinese Long) v3cmocucB0236
CmoCh13G000870Cucumber (Chinese Long) v3cmocucB0253
CmoCh13G000870Watermelon (97103) v2cmowmbB204
CmoCh13G000870Wax gourdcmowgoB0238
CmoCh13G000870Wax gourdcmowgoB0245