CmoCh09G011450 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGACTAATTCGAGGAATAGAAGAGTTGACTGATCGAATAGGAAGATTGGAGATTCAAAATCAAGCTCGACAGAGGATTCCACTACCTACACCCTCAACTGATACATATGAGGGCGACAATTCTGATCACCACGAGGATAATCCGCATGTGGTTGGCCATGGCTTGATGCGAGGGAGAGACCATGGAAGAAGGTATCATAATTTACAACAACAAGTTCCTTATGATGATAGAATTGATCGTAACGTGGGGAGCATCAAATTAAAACTTCCCAAGTTTTATGGAAAAAACGATCCAGAGGAGTAGCTTGAGTGGGAGAAAACGGTGGAGTCAGTGTTCAACTGTCATAATTTTAGTGATGAAAAGAAGGTATTGTTGTGCATTGCTCAATTCAAACAATATGCTCAAATTTGGTGGGATAAATTGATATCAAGTAGGAGAAGAAACCTTGAAGCACCAATTGATTCATGGTACGAGTTCAAAGAGTCCATGAGGAAGCGTTTTGTTCCACAATATTTTCAACGGGACATGGCGCAAAAGCTTCAAGCATTGAAACAAGGATGCAAATCTGTGGAAGATTATTACAAGGAGATGGATACATTAATGGATCGACTTGATCTCGATGAGGACATGGAGGCTCTCATGGCATGGTTTCTTAATGGGTTAAACACAGAGATTGCAGACAAGACTGATTTACAGCCTTATTCTAATATTGAGGAGTTGTTGCACAGTGCAATTAAGATCGAGAGGCAAATCCAACAAAGGTCTCAACGGTATTCTTCTAAAACTTTTCCCAATTCTACTTCTACATGGAAAAAGGATAGTAAAAACATTGATTATAAGCATAGAAATCAAGAGATTAATGAGAAGCCTCAAGCTAAATTTGAGAAAGGGGAGAGTTCTAGAACAGGGAAAGAAAAAGTAGAAAAGTCTAATGTTCGAAATAGAGATTTAAAGTGTTGGAGATGTCAAGGGGTAGGACATTATAATAGAGATTGCCCAAATGCAAGAATTATGACCATCAAGGAGGGGGAAATTGTTACAGATGACGAGGCATATGACGACATAAAGGAGGAAACTAATGAGAGTGAGGAGTTTAGTGAAGAGGACCCTATACATATATCTTTGGTTACTCGACGAGCTCTAAACACCCACATTAAGGAGGACAGCCTAGACCAATGGGAGAACTTATTTCAAACCTGGTGTCTTGTTCAATCTATACCTTGTAGTGTTGTCATTGATAGCGGTAGTTGCACCAATGTTGTGAGTTCCATTCTAGTCAAAAGACATAATTTAAAGACACAACTACATCCACGACCCTACAAGCTTCAATGGTTGAATGATCATGGGGAAGTACGGGTAACTCAATAAGCTCTTGTTTCTTTTACTATTAGAAATATGTTGATGATGTTTTATGTGATGTTGTATCCATGCATGTTGGAGATTTACTACTGGGGAGGCCTTGGCAATTTGATCGTCGGGTAATGTATGATGGGTATGCAAATCGATACTCTTTTATTCACAACGGTAGAAAAACTACTCTTATTCCATTGTCTCCAAAAGATGTATTTATTGATCATTGCAAACTTGAAAAGAAAAGGCAAGAGGTTGATGCAAAAGCAGAGATTGAAAAAGAATTAAGTGAACAAAAAGAGCTTGAGTGAAAAGCAAAAGAGTAACACTCCCTAGAGAAAAAAAAGAGAGAAAAGCCAAATTAGTAAGCTTGTATGTTAGCTCAAGTGAGGCTAGTAATCTTTTGCTCTCTAACCAGACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTACCTCTTCTTTGCCTAGTGATTTTGTTGTGCTTTTGCAAGAGTTTGAAGATTTATTTTTCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAATACAAGACTGACTTAATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATTCAAAGGAGGCTGAAGAGATACAAAGGCAAGTAAGTGAACTCCTTGCTAAAGGGTATGTACGTGAAAGTTTGAGTCCTTGTTCTGTTCCAGTTATTCTTGTACGTAAGAAAGATGGTTCTTGGCGTATATGTGTTGATTGTAGGGCTATAAACAAGATAACTATAAAGTATATGCATCTAATTCCCAGATTAGATGA ATGGAAAGACTAATTCGAGGAATAGAAGAGTTGACTGATCGAATAGGAAGATTGGAGATTCAAAATCAAGCTCGACAGAGGATTCCACTACCTACACCCTCAACTGATACATATGAGGGCGACAATTCTGATCACCACGAGGATAATCCGCATGTGGTTGGCCATGGCTTGATGCGAGGGAGAGACCATGGAAGAAGGAGAAGAAACCTTGAAGCACCAATTGATTCATGGTACGAGTTCAAAGAGTCCATGAGGAAGCGTTTTGTTCCACAATATTTTCAACGGGACATGGCGCAAAAGCTTCAAGCATTGAAACAAGGATGCAAATCTGTGGAAGATTATTACAAGGAGATGGATACATTAATGGATCGACTTGATCTCGATGAGGACATGGAGGCTCTCATGGCATGGTTTCTTAATGGGTTAAACACAGAGATTGCAGACAAGACTGATTTACAGCCTTATTCTAATATTGAGGAGTTGTTGCACAGTGCAATTAAGATCGAGAGGCAAATCCAACAAAGGTCTCAACGGTATTCTTCTAAAACTTTTCCCAATTCTACTTCTACATGGAAAAAGGATAGTAAAAACATTGATTATAAGCATAGAAATCAAGAGATTAATGAGAAGCCTCAAGCTAAATTTGAGAAAGGGGAGAGTTCTAGAACAGGGAAAGAAAAAGTAGAAAAGTCTAATGTTCGAAATAGAGATTTAAAGTGTTGGAGATGTCAAGGGGTAGGACATTATAATAGAGATTGCCCAAATGCAAGAATTATGACCATCAAGGAGGGGGAAATTGTTACAGATGACGAGGCATATGACGACATAAAGGAGGAAACTAATGAGAGTGAGGAGTTTAGTGAAGAGGACCCTATACATATATCTTTGGTTACTCGACGAGCTCTAAACACCCACATTAAGGAGGACAGCCTAGACCAATGGGAGAACTTATTTCAAACCTGGTGTCTTGTTCAATCTATACCTTGTAGTGTTGTCATTGATAGCGGTAGTTGCACCAATGTTACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTACCTCTTCTTTGCCTAGTGATTTTGTTGTGCTTTTGCAAGAGTTTGAAGATTTATTTTTCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAATACAAGACTGACTTAATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATTCAAAGGAGGCTGAAGAGATACAAAGGCAAGTAAGTGAACTCCTTGCTAAAGGGTATGGCTATAAACAAGATAACTATAAAGTATATGCATCTAATTCCCAGATTAGATGA ATGGAAAGACTAATTCGAGGAATAGAAGAGTTGACTGATCGAATAGGAAGATTGGAGATTCAAAATCAAGCTCGACAGAGGATTCCACTACCTACACCCTCAACTGATACATATGAGGGCGACAATTCTGATCACCACGAGGATAATCCGCATGTGGTTGGCCATGGCTTGATGCGAGGGAGAGACCATGGAAGAAGGAGAAGAAACCTTGAAGCACCAATTGATTCATGGTACGAGTTCAAAGAGTCCATGAGGAAGCGTTTTGTTCCACAATATTTTCAACGGGACATGGCGCAAAAGCTTCAAGCATTGAAACAAGGATGCAAATCTGTGGAAGATTATTACAAGGAGATGGATACATTAATGGATCGACTTGATCTCGATGAGGACATGGAGGCTCTCATGGCATGGTTTCTTAATGGGTTAAACACAGAGATTGCAGACAAGACTGATTTACAGCCTTATTCTAATATTGAGGAGTTGTTGCACAGTGCAATTAAGATCGAGAGGCAAATCCAACAAAGGTCTCAACGGTATTCTTCTAAAACTTTTCCCAATTCTACTTCTACATGGAAAAAGGATAGTAAAAACATTGATTATAAGCATAGAAATCAAGAGATTAATGAGAAGCCTCAAGCTAAATTTGAGAAAGGGGAGAGTTCTAGAACAGGGAAAGAAAAAGTAGAAAAGTCTAATGTTCGAAATAGAGATTTAAAGTGTTGGAGATGTCAAGGGGTAGGACATTATAATAGAGATTGCCCAAATGCAAGAATTATGACCATCAAGGAGGGGGAAATTGTTACAGATGACGAGGCATATGACGACATAAAGGAGGAAACTAATGAGAGTGAGGAGTTTAGTGAAGAGGACCCTATACATATATCTTTGGTTACTCGACGAGCTCTAAACACCCACATTAAGGAGGACAGCCTAGACCAATGGGAGAACTTATTTCAAACCTGGTGTCTTGTTCAATCTATACCTTGTAGTGTTGTCATTGATAGCGGTAGTTGCACCAATGTTACTATTCTTGTACTTATGTGCAAGGGGTCTTGTTACTTTACTAACATGCTTACCTCTTCTTTGCCTAGTGATTTTGTTGTGCTTTTGCAAGAGTTTGAAGATTTATTTTTCGAGGAGATGCCTAGTAGTTTGCCACCACTTAGAGGGATTGAATACAAGACTGACTTAATTCCTGGCGCGCCCATTCCAAACCGACCAGCTTATAGGACTAATTCAAAGGAGGCTGAAGAGATACAAAGGCAAGTAAGTGAACTCCTTGCTAAAGGGTATGGCTATAAACAAGATAACTATAAAGTATATGCATCTAATTCCCAGATTAGATGA
BLAST of CmoCh09G011450 vs. TrEMBL
Match: A5AMK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016481 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 8.5e-64 Identity = 156/379 (41.16%), Postives = 231/379 (60.95%), Query Frame = 1
BLAST of CmoCh09G011450 vs. TrEMBL
Match: A5C3B5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020071 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.2e-55 Identity = 147/378 (38.89%), Postives = 215/378 (56.88%), Query Frame = 1
BLAST of CmoCh09G011450 vs. TrEMBL
Match: A5AG41_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037350 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.2e-51 Identity = 140/376 (37.23%), Postives = 209/376 (55.59%), Query Frame = 1
BLAST of CmoCh09G011450 vs. TrEMBL
Match: E7BQD7_PEA (Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 9.4e-47 Identity = 118/284 (41.55%), Postives = 167/284 (58.80%), Query Frame = 1
BLAST of CmoCh09G011450 vs. TrEMBL
Match: E7BQD6_PEA (Mutant gag-pol polyprotein OS=Pisum sativum PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.1e-46 Identity = 117/276 (42.39%), Postives = 162/276 (58.70%), Query Frame = 1
BLAST of CmoCh09G011450 vs. NCBI nr
Match: gi|823218652|ref|XP_012442007.1| (PREDICTED: uncharacterized protein LOC105767023 [Gossypium raimondii]) HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67 Identity = 161/375 (42.93%), Postives = 236/375 (62.93%), Query Frame = 1
BLAST of CmoCh09G011450 vs. NCBI nr
Match: gi|823137916|ref|XP_012468777.1| (PREDICTED: uncharacterized protein LOC105786844 [Gossypium raimondii]) HSP 1 Score: 260.8 bits (665), Expect = 4.5e-66 Identity = 158/376 (42.02%), Postives = 234/376 (62.23%), Query Frame = 1
BLAST of CmoCh09G011450 vs. NCBI nr
Match: gi|147818189|emb|CAN73562.1| (hypothetical protein VITISV_016481 [Vitis vinifera]) HSP 1 Score: 252.7 bits (644), Expect = 1.2e-63 Identity = 156/379 (41.16%), Postives = 231/379 (60.95%), Query Frame = 1
BLAST of CmoCh09G011450 vs. NCBI nr
Match: gi|698551637|ref|XP_009769379.1| (PREDICTED: uncharacterized protein LOC104220246 [Nicotiana sylvestris]) HSP 1 Score: 240.4 bits (612), Expect = 6.3e-60 Identity = 148/381 (38.85%), Postives = 220/381 (57.74%), Query Frame = 1
BLAST of CmoCh09G011450 vs. NCBI nr
Match: gi|1021525293|ref|XP_016206048.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107646376 [Arachis ipaensis]) HSP 1 Score: 236.9 bits (603), Expect = 6.9e-59 Identity = 158/414 (38.16%), Postives = 221/414 (53.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |