CmoCh08G002030 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAAGATGGATTTTTTAAGAGAAGGATTAGACACAAAATTAAACGCTTAATTATTTTAACAAGTACTGGACTAGTTGGGCGTGTGACAAACATTTTATTGTAGCGGGAGTTGACAAGAAAGAAGAAGACAAATCCAAATGGTCGTGCACACTATTTCGTCCCGTTTATGACAGTTCTCATCAATCATTTTGATTTTGTCACGTTGGTCTTGATTTTAACGTAGTCGTATGGAGAGTTGGTTCTCCTTATGGAGGATGTTTATGTGCACAATGGTCGGTTTCTAATAGAGATCTCTGCGATCTCAGTATAGTTATTAACTGGAAACTACTGTGGTCATTACCTAAATTTATTGCTTTTAAAGGTGATAATAGTTCTTATCTTAGTGCTCGTTCAATTGACAATAGTCCATATCTACAATTTTCATCCAATAAATTGACGATCCTGCCATTCAGATGAAGACTTTCATCTCAAATGATGAAAAAATTTGCATCAAGTCAGTTTACTTCCAAAATTTTTAGAGACGTGACGCTTCTAATTGAATTTTTGTTGAATAATGTGAGACCACTACTCAAAATCTCGATACTTTATTTTTGCCCACTAAAGTTTCACCCGATGTTGTTGCTCTTTGTAACTTGGGTAATGACAAGATATACTATAGGCGTGAAAAATATTGATGAATTTTCACGCTTACATATGGTTGAGCTTGTTCTTTCATGACAAATCAACAATGTCGTATTTTGTCTTTTTGATGCTAGGATCCATGATCAAGTTGTTATCGTATTAGCAACTACAGAAGTTGCAAATAATTCGAACGTACCCAATACTGAATGTGTGACTTTCTCATACACAAACAATGGATCGAGCACATGGGCTTCTTCAGTCTCAACAAAATTGGACGTCAAGACAACGATCGAAGCAAATATTCCGCTCATTGTTGATGGAAAGATGATTGAAACATCGTCAGCTAAGTTTGTAAGACTCAAGAGATGGTATATGAGGTTACTATACCACCATTGAGCACTATCAACGTTACTTTATGTGTAACCAAGGGCTCGTGTGACGTTCCGTTCTCATACCAACAAGTTGACGTCCTCAGAGGTGGGAAAAAAGTTGAATATTCTTTAAACGGTATTTACTATGGCACCAACTACTATAAAACTAAAACTAAGTCAATATGTTGA ATGGACAAAGATGGATTTTTTAAGAGAAGGATTAGACACAAAATTAAACGCTTAATTATTTTAACAAGTACTGGACTAGTTGGGCGTCGGGAGTTGACAAGAAAGAAGAAGACAAATCCAAATGGTCGTGCACACTATTTCGTCCCGTTTATGACAGTTCTCATCAATCATTTTGATTTTGTCACGTTGTCGTATGGAGAGTTGGTTCTCCTTATGGAGGATGTTTATGTGCACAATGGTCGGTTTCTAATAGAGATCTCTGCGATCTCATTATTAACTGGAAACTACTGTGGTCATTACCTAAATTTATTGCTTTTAAAGATGAAGACTTTCATCTCAAATGATGAAAAAATTTGCATCAAGATCCATGATCAAGTTGTTATCGTATTAGCAACTACAGAAGTTGCAAATAATTCGAACGTACCCAATACTGAATGTGTGACTTTCTCATACACAAACAATGGATCGAGCACATGGGCTTCTTCAGTCTCAACAAAATTGGACGTCAAGACAACGATCGAAGCAAATATTCCGCTCATTGTTGATGGAAAGATGATTGAAACATCGTCAGCTAAGTTTACTCAAGAGATGGTATATGAGGTTACTATACCACCATTGAGCACTATCAACGTTACTTTATGTGTAACCAAGGGCTCGTGTGACGTTCCGTTCTCATACCAACAAGTTGACGTCCTCAGAGGTGGGAAAAAAGTTGAATATTCTTTAAACGGTATTTACTATGGCACCAACTACTATAAAACTAAAACTAAGTCAATATGTTGA ATGGACAAAGATGGATTTTTTAAGAGAAGGATTAGACACAAAATTAAACGCTTAATTATTTTAACAAGTACTGGACTAGTTGGGCGTCGGGAGTTGACAAGAAAGAAGAAGACAAATCCAAATGGTCGTGCACACTATTTCGTCCCGTTTATGACAGTTCTCATCAATCATTTTGATTTTGTCACGTTGTCGTATGGAGAGTTGGTTCTCCTTATGGAGGATGTTTATGTGCACAATGGTCGGTTTCTAATAGAGATCTCTGCGATCTCATTATTAACTGGAAACTACTGTGGTCATTACCTAAATTTATTGCTTTTAAAGATGAAGACTTTCATCTCAAATGATGAAAAAATTTGCATCAAGATCCATGATCAAGTTGTTATCGTATTAGCAACTACAGAAGTTGCAAATAATTCGAACGTACCCAATACTGAATGTGTGACTTTCTCATACACAAACAATGGATCGAGCACATGGGCTTCTTCAGTCTCAACAAAATTGGACGTCAAGACAACGATCGAAGCAAATATTCCGCTCATTGTTGATGGAAAGATGATTGAAACATCGTCAGCTAAGTTTACTCAAGAGATGGTATATGAGGTTACTATACCACCATTGAGCACTATCAACGTTACTTTATGTGTAACCAAGGGCTCGTGTGACGTTCCGTTCTCATACCAACAAGTTGACGTCCTCAGAGGTGGGAAAAAAGTTGAATATTCTTTAAACGGTATTTACTATGGCACCAACTACTATAAAACTAAAACTAAGTCAATATGTTGA
BLAST of CmoCh08G002030 vs. TrEMBL
Match: F6HZZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.0e-21 Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = 1
BLAST of CmoCh08G002030 vs. TrEMBL
Match: D7U3H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06000 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.2e-21 Identity = 64/165 (38.79%), Postives = 92/165 (55.76%), Query Frame = 1
BLAST of CmoCh08G002030 vs. TrEMBL
Match: F6HZZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06110 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20 Identity = 65/165 (39.39%), Postives = 90/165 (54.55%), Query Frame = 1
BLAST of CmoCh08G002030 vs. TrEMBL
Match: D7U3H9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06060 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.6e-20 Identity = 67/175 (38.29%), Postives = 94/175 (53.71%), Query Frame = 1
BLAST of CmoCh08G002030 vs. TrEMBL
Match: A0A0A0K956_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080920 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.6e-20 Identity = 64/150 (42.67%), Postives = 92/150 (61.33%), Query Frame = 1
BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|659120444|ref|XP_008460197.1| (PREDICTED: uncharacterized protein LOC103499082 [Cucumis melo]) HSP 1 Score: 110.9 bits (276), Expect = 3.3e-21 Identity = 66/151 (43.71%), Postives = 89/151 (58.94%), Query Frame = 1
BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|225465425|ref|XP_002264858.1| (PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera]) HSP 1 Score: 110.5 bits (275), Expect = 4.3e-21 Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = 1
BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|297744329|emb|CBI37299.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 110.5 bits (275), Expect = 4.3e-21 Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = 1
BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|225465417|ref|XP_002264098.1| (PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera]) HSP 1 Score: 109.8 bits (273), Expect = 7.4e-21 Identity = 64/165 (38.79%), Postives = 92/165 (55.76%), Query Frame = 1
BLAST of CmoCh08G002030 vs. NCBI nr
Match: gi|694401999|ref|XP_009376017.1| (PREDICTED: uncharacterized protein LOC103964769 [Pyrus x bretschneideri]) HSP 1 Score: 108.2 bits (269), Expect = 2.2e-20 Identity = 59/145 (40.69%), Postives = 90/145 (62.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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