CmoCh05G004810 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G004810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Plant/F4N2-9 protein, putative
Location	Cmo_Chr05 : 2252478 .. 2253789 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATTCATCTATGCCTCCTAAAGCACAATTTCCTTTCATTTTCATGTGGGTCTTCCTCTTAATTCATTTTCATTTCTCACACTCTTCAATATCTCCCAAGATCCCTCTTATGTCCTTCAATTCTTCCATATATATAGCTTTTTACACAAAGGTTTGCACAATAAGCTCGCCCTTTCGAAGAACAAAGATGTCGCTCTCGAGCTCGGAGATGATCAATAAGAAGATGTTCCACCATAGGAGAGCTTCGAAGGAGCTCGAGGTATTCGAAGCTGCTCGATATTTCTCTGATTACAATGAAACCTCGGCGACGATGAACAGTTTCAGCACAAAGTTTACTCCGAAAGTGAAGAAGAAAGACAAAGGATGGATCAAAGGGAGAATCAGCTTAGACATGCAGGTTTTCGATCTTAATATTGAAGTTCGAGTCGCATTATTGAAGTTCGAGCATAAATTTAACCATGTTTTTTTTTTCCGACATAGGTGAAGAACATCCTTAATCTCCCCGAACATTTCCCCCAACATTCTTACAATGTTGAAAAGCATGTTACAAAGGAGAAGAAGTACAAACAACCAAGCTCACCTGGTGGGAGACTAGCAAGCTTTCTAAACTCTCTCTTTAGCCATTCAAGTTCGAAGAAGAAGAAGTCGAAACTTTTTGCGCAATCCGTGGAAGACATAGCGGAAGACGAAAGCCGAACGTCGAAGAGAAGGATTAGCATCAGCCATTTTCGATCCTCGAACGCGGCTGCAACGGATGCTAAGTTCATCTATTCTTCGTCTCCGGGCAATAATTCAGGTAAACCCCGAATCAACTTAACCTAAATATATATATATATATATATATATATTCTAATCATTTATTCATATTCTTAACAAATAGGTTTCAGAACACCGCCTCCGCACGTTCAAACCCCGACAAAGAGCTACAAGGAACTATTGTCTTTTTCAAAGTTCACCCGACACGTAAAATCAGCGGAGACGTTGGAGAAACGGGCTTCGAAACAAAAGAAGAAGAATTTGAGTAATTGTTCTTCAGAAAAAGATAGGGTTTGGGTTGAAAAACCATTGGGAGATGAAGAAATGAAGAAAAAATTGAAGAAATTTGAGCATGACATTAATATTATTGATGATATTGATGATGATGATGGTGGAGAAACAGATTCCAGCTCAGATTTGTTTGAATTACAGATCTATGATTTGGATTATTACTCAAATGGGTTGCCTGTTTATGAATCTACTGATATTGATAGCATCAAGAGAAGAAATTCAATCTCTAATGGTGTTTGTTGAGATGTAAGAAGAACAAACTTG

mRNA sequence

CACATTCATCTATGCCTCCTAAAGCACAATTTCCTTTCATTTTCATGTGGGTCTTCCTCTTAATTCATTTTCATTTCTCACACTCTTCAATATCTCCCAAGATCCCTCTTATGTCCTTCAATTCTTCCATATATATAGCTTTTTACACAAAGGTTTGCACAATAAGCTCGCCCTTTCGAAGAACAAAGATGTCGCTCTCGAGCTCGGAGATGATCAATAAGAAGATGTTCCACCATAGGAGAGCTTCGAAGGAGCTCGAGGTATTCGAAGCTGCTCGATATTTCTCTGATTACAATGAAACCTCGGCGACGATGAACAGTTTCAGCACAAAGTTTACTCCGAAAGTGAAGAAGAAAGACAAAGGATGGATCAAAGGGAGAATCAGCTTAGACATGCAGGTGAAGAACATCCTTAATCTCCCCGAACATTTCCCCCAACATTCTTACAATGTTGAAAAGCATGTTACAAAGGAGAAGAAGTACAAACAACCAAGCTCACCTGGTGGGAGACTAGCAAGCTTTCTAAACTCTCTCTTTAGCCATTCAAGTTCGAAGAAGAAGAAGTCGAAACTTTTTGCGCAATCCGTGGAAGACATAGCGGAAGACGAAAGCCGAACGTCGAAGAGAAGGATTAGCATCAGCCATTTTCGATCCTCGAACGCGGCTGCAACGGATGCTAAGTTCATCTATTCTTCGTCTCCGGGCAATAATTCAGGTTTCAGAACACCGCCTCCGCACGTTCAAACCCCGACAAAGAGCTACAAGGAACTATTGTCTTTTTCAAAGTTCACCCGACACGTAAAATCAGCGGAGACGTTGGAGAAACGGGCTTCGAAACAAAAGAAGAAGAATTTGAGTAATTGTTCTTCAGAAAAAGATAGGGTTTGGGTTGAAAAACCATTGGGAGATGAAGAAATGAAGAAAAAATTGAAGAAATTTGAGCATGACATTAATATTATTGATGATATTGATGATGATGATGGTGGAGAAACAGATTCCAGCTCAGATTTGTTTGAATTACAGATCTATGATTTGGATTATTACTCAAATGGGTTGCCTGTTTATGAATCTACTGATATTGATAGCATCAAGAGAAGAAATTCAATCTCTAATGGTGTTTGTTGAGATGTAAGAAGAACAAACTTG

Coding sequence (CDS)

ATGCCTCCTAAAGCACAATTTCCTTTCATTTTCATGTGGGTCTTCCTCTTAATTCATTTTCATTTCTCACACTCTTCAATATCTCCCAAGATCCCTCTTATGTCCTTCAATTCTTCCATATATATAGCTTTTTACACAAAGGTTTGCACAATAAGCTCGCCCTTTCGAAGAACAAAGATGTCGCTCTCGAGCTCGGAGATGATCAATAAGAAGATGTTCCACCATAGGAGAGCTTCGAAGGAGCTCGAGGTATTCGAAGCTGCTCGATATTTCTCTGATTACAATGAAACCTCGGCGACGATGAACAGTTTCAGCACAAAGTTTACTCCGAAAGTGAAGAAGAAAGACAAAGGATGGATCAAAGGGAGAATCAGCTTAGACATGCAGGTGAAGAACATCCTTAATCTCCCCGAACATTTCCCCCAACATTCTTACAATGTTGAAAAGCATGTTACAAAGGAGAAGAAGTACAAACAACCAAGCTCACCTGGTGGGAGACTAGCAAGCTTTCTAAACTCTCTCTTTAGCCATTCAAGTTCGAAGAAGAAGAAGTCGAAACTTTTTGCGCAATCCGTGGAAGACATAGCGGAAGACGAAAGCCGAACGTCGAAGAGAAGGATTAGCATCAGCCATTTTCGATCCTCGAACGCGGCTGCAACGGATGCTAAGTTCATCTATTCTTCGTCTCCGGGCAATAATTCAGGTTTCAGAACACCGCCTCCGCACGTTCAAACCCCGACAAAGAGCTACAAGGAACTATTGTCTTTTTCAAAGTTCACCCGACACGTAAAATCAGCGGAGACGTTGGAGAAACGGGCTTCGAAACAAAAGAAGAAGAATTTGAGTAATTGTTCTTCAGAAAAAGATAGGGTTTGGGTTGAAAAACCATTGGGAGATGAAGAAATGAAGAAAAAATTGAAGAAATTTGAGCATGACATTAATATTATTGATGATATTGATGATGATGATGGTGGAGAAACAGATTCCAGCTCAGATTTGTTTGAATTACAGATCTATGATTTGGATTATTACTCAAATGGGTTGCCTGTTTATGAATCTACTGATATTGATAGCATCAAGAGAAGAAATTCAATCTCTAATGGTGTTTGTTGA

Homology

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BLAST of CmoCh05G004810 vs. Swiss-Prot
Match: BIG1E_ARATH (Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana GN=At1g69160 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.2e-33
Identity = 118/329 (35.87%), Postives = 180/329 (54.71%), Query Frame = 1


Query: 61  SLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKDK--- 120
           S  S ++  +    H+R S+EL+VFEAA YF  YNE S+  +  + K+     +++    
Sbjct: 8   SAESDKLSRRISLTHKRNSEELDVFEAAVYFG-YNEASSGDHGHTQKYGYNAAREENPRR 67

Query: 121 -GWIKG--RISLDMQVK---NILNLPE-HFPQHSYNVEKHVTKEKKYKQPSSPGGRLASF 180
            G + G  RISLD+ ++    + +L + H  +H     K      ++KQPSSPGG++ASF
Sbjct: 68  WGILGGGRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHKQPSSPGGKIASF 127

Query: 181 LNSLFSHSSSKKKKSKLFAQS-------VEDIAEDESRTSKRRISISHFRSSN------- 240
           LNSLF  + SKK KSK  +++        E+I        +RR SISHF SS+       
Sbjct: 128 LNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISHFFSSSRSTSTTT 187

Query: 241 --AAATDAKFIYSSSPGNNSGFRTPPPHVQTPTKSYKELLSFSKFTRHVKSAETLEKRAS 300
              A++ +K + SSS   +SGFRTPPP++ TPTK+YK+ L+++  T+ V   ET   +  
Sbjct: 188 TTTASSSSKSLISSS---SSGFRTPPPYLNTPTKNYKQFLNYTSATKQVGEEETKTNKEY 247

Query: 301 K--QKKKNLSNCSSEKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDSSSD 360
               +K  +    SE  R+W +    D++ + K +             +DDG E+DSSSD
Sbjct: 248 SWLDEKLKVMESLSENQRIWSDDEDIDDDRRIKRE------------GEDDGMESDSSSD 307

Query: 361 LFELQIYDLDYYSNGLPVYESTDIDSIKR 362
           LFELQ Y+L     GLPVYE+T++ +I +
Sbjct: 308 LFELQNYELS--RGGLPVYETTNVANINK 318

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BLAST of CmoCh05G004810 vs. TrEMBL
Match: A0A0A0KD85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366580 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 1.9e-130
Identity = 266/338 (78.70%), Postives = 285/338 (84.32%), Query Frame = 1


Query: 60  MSLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKDKGW 119
           MSLSSSE+INKKMFHHRRASKEL+VFEAARYFSDYNETSA+ +SF  KFTPK+KKKDKGW
Sbjct: 1   MSLSSSEIINKKMFHHRRASKELDVFEAARYFSDYNETSASTSSFGAKFTPKMKKKDKGW 60

Query: 120 IKGRISLDMQVKNILNLPEHFPQH-SYNVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHS 179
           IKGRISLDMQVKNILNLP+HFPQH SY+VEK VTKEKKYKQPSSPGGRLASFLNS+FSHS
Sbjct: 61  IKGRISLDMQVKNILNLPQHFPQHDSYSVEKQVTKEKKYKQPSSPGGRLASFLNSIFSHS 120

Query: 180 SSKKKKSKLFAQSV-EDIAEDESRTSKRRISISHFRSSNAAATDAKFIYSSSP-GNNSGF 239
           SSKKKKSK FAQS+ ED+ +DESRTSKRRISISHFR+SNA ATDAKFIYSSSP  NNSGF
Sbjct: 121 SSKKKKSKHFAQSMDEDMEDDESRTSKRRISISHFRTSNATATDAKFIYSSSPRNNNSGF 180

Query: 240 RTPPPHVQTPTKSYKELLSFSKFTRHVKSAETLEK---------------RASKQKKKNL 299
           RTPPPHVQTPTKSYKELLSFSKF R VKSAE LEK                  K KK NL
Sbjct: 181 RTPPPHVQTPTKSYKELLSFSKFNRLVKSAEALEKPSMDDKRIRKDKGVVEKQKMKKNNL 240

Query: 300 S--NCSSEKDRVWVEKPLGDEEMKKKLKKFEHDIN--------IIDDIDDDDGGETDSSS 359
           S  NC SEKDRVWVEK L   EMKKKL+KF+H+IN          +D ++DDGGETDSSS
Sbjct: 241 SNNNCCSEKDRVWVEKNLVGGEMKKKLRKFDHEINKNNTVGGHNNNDDEEDDGGETDSSS 300

Query: 360 DLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSISNGV 370
           DLFELQIYDLDYYSNGLPVYESTDIDSIKRRNS+SN V
Sbjct: 301 DLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSVSNAV 338

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BLAST of CmoCh05G004810 vs. TrEMBL
Match: F6HF00_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00120 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.2e-56
Identity = 162/338 (47.93%), Postives = 211/338 (62.43%), Query Frame = 1


Query: 61  SLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKDKGWI 120
           +LS ++ I KK FH R  S EL+VFEAARYFS  NE     N  +      ++++ +GW 
Sbjct: 5   ALSEADKIYKKSFHRRNDSGELDVFEAARYFSGGNEIIG-YNGAAFPQRMMMREERQGWR 64

Query: 121 KGRISLDMQVKNILNLPEHFPQHSYNVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHSSS 180
            GRISLDM +++  +LP    Q S+ VEK + ++ KYKQPSSPGGRLASFLNSLF+ ++S
Sbjct: 65  GGRISLDMPMRS--SLPT---QSSHAVEKQMKEKIKYKQPSSPGGRLASFLNSLFNQTNS 124

Query: 181 KKKKSKLFAQSVEDIAEDESRTSKRRISISHFRSSNAAATDAKFIYSSSPGNNSGFRTPP 240
           KKKKSK  AQS++D  E      KRR SISHFRSS+ A  D+K +YSSS   +SGFRTPP
Sbjct: 125 KKKKSKSTAQSIKDEEESPGGRRKRRSSISHFRSSSTA--DSKSVYSSS---SSGFRTPP 184

Query: 241 PHVQTPTKSYKELLSFSKFTR----------HVKSA----ETLEKRASK----------- 300
           P+  TPTK+YK+L S+S   +          +VK+     E L+++  K           
Sbjct: 185 PYANTPTKTYKDLRSYSDHRQVVSLPNYNNGNVKATGLRNEALDEKRIKELVWLDEKFKF 244

Query: 301 -----QKKKNLSNCSSEKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDSS 360
                +K KN SN  SEKDR+WV++   +E+  +KL          D+I  D G E+DSS
Sbjct: 245 SSGFSEKHKNFSNGLSEKDRIWVDEYPSEEKEFRKL----------DEI--DAGAESDSS 304

Query: 361 SDLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSISNG 369
           SDLFELQ YDL  YS+GLPVYE+T +DSIKR   ISNG
Sbjct: 305 SDLFELQNYDLGCYSSGLPVYETTHMDSIKRGAPISNG 319

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BLAST of CmoCh05G004810 vs. TrEMBL
Match: B9REB4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1619950 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.1e-56
Identity = 160/339 (47.20%), Postives = 203/339 (59.88%), Query Frame = 1


Query: 62  LSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKD--KGW 121
           L  +  + KK  H R  S EL+VFEAARYFS YNE +         +T K+ + D    W
Sbjct: 6   LPDTSKLYKKSLHRRNDSDELDVFEAARYFSGYNEAAGYNGG---TYTQKILRDDYRHPW 65

Query: 122 IKGRISLDMQVKNILNLPEHFPQHSYNVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHSS 181
             GR+SLD+ ++N   LP+    H + VEK + KEKKYKQPSSPGGRLASFLNSLF+ +S
Sbjct: 66  RGGRMSLDVPMRN--PLPQQTHSHHHTVEKQILKEKKYKQPSSPGGRLASFLNSLFNQTS 125

Query: 182 SKKKKSKLFAQSVEDIAEDESRTSKRRISISHFRSSNAAATDAKFIYSSSPGNNSGFRTP 241
           SKKKKSK   QS +D  E      KRR SISHFRS++ A  D K +YSSS   +SGFRTP
Sbjct: 126 SKKKKSKSATQSTKDDDESPGGRRKRRSSISHFRSTSTA--DTKSLYSSS---SSGFRTP 185

Query: 242 PPHVQTPTKSYKEL---------LSFSKFTRHVKSA----ETLEKR-------------- 301
           PP+  TPTKSYK+L         +S S    +VKS     E L+++              
Sbjct: 186 PPYANTPTKSYKDLRSYSDHKQVISLSMQNGNVKSTGLQNEVLDEKKKTDLSWLDEKFKI 245

Query: 302 --ASKQKKKNLSNCSS-EKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDS 361
             A  +K KNL N    EKDR+WV++   +E   K  +KF+         + DDG ++DS
Sbjct: 246 SDALSEKTKNLGNHRYLEKDRIWVDQYPSEE---KGFRKFD---------EVDDGADSDS 305

Query: 362 SSDLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSISNG 369
           SSDLFELQ YDL  YS+GLPVYE+T++DSIK+   ISNG
Sbjct: 306 SSDLFELQNYDLGIYSSGLPVYETTNMDSIKKGAPISNG 322

[Close]

BLAST of CmoCh05G004810 vs. TrEMBL
Match: V4VF59_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032087mg PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.6e-55
Identity = 156/346 (45.09%), Postives = 201/346 (58.09%), Query Frame = 1


Query: 60  MSLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKD--K 119
           ++LS ++ I KK FHHR  S EL+VFEAARYFS YNE +A        F+ K+ ++D  +
Sbjct: 3   LTLSDTDKIYKKSFHHRNDSGELDVFEAARYFSGYNEAAAAA------FSQKILREDHRQ 62

Query: 120 GWIKGRISLDMQVKN--ILNLPEH-------FPQHSYNVEKHVTKEKKYKQPSSPGGRLA 179
            W  GRISLD+ +++  +  LP+H       + + S N  +   KEKKYKQPSSPGGRLA
Sbjct: 63  AWRGGRISLDVPLRDSVLQQLPQHHANNAISYQKQSLNTIEKQMKEKKYKQPSSPGGRLA 122

Query: 180 SFLNSLFSHSSSKKKKSKLFAQSVEDIAEDESRTSKRRISISHFRSSNAAA-TDAKFIYS 239
           SFLNSLFS S SKKKKSK   QS++D  E      KRR SISHFRSS+    + +K +YS
Sbjct: 123 SFLNSLFSQSGSKKKKSKSTTQSLKDEEESPGGRRKRRSSISHFRSSSTTTDSSSKSLYS 182

Query: 240 SSPGNNSGFRTPPPHVQTPTKSYKELLSFSKFTRHVKSAETLEKRASKQ----------- 299
           SS   +SGFRTPP +  TPTKSYK+  S+S     V+S    +     Q           
Sbjct: 183 SS---SSGFRTPPAYAYTPTKSYKDFRSYSDHKHQVESLSLSKHNIGGQVVLKPTTALLQ 242

Query: 300 --------------KKKNLSNCSSEKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDD 359
                         K  N +N    K R WV++   +E   K+ +KF+         + D
Sbjct: 243 NNEVTTILDHHDNFKFNNNTNSEKHKTRNWVDQYSSEE---KEFRKFD---------EVD 302

Query: 360 DGGETDSSSDLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSISNG 369
           DG ++DSSSDLFELQ YDL  YS+GLPVYE+T +DSIKR   ISNG
Sbjct: 303 DGADSDSSSDLFELQNYDLGIYSSGLPVYETTHMDSIKRGAPISNG 327

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BLAST of CmoCh05G004810 vs. TrEMBL
Match: A0A067FSJ1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020192mg PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.0e-55
Identity = 155/346 (44.80%), Postives = 201/346 (58.09%), Query Frame = 1


Query: 60  MSLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKD--K 119
           ++LS ++ I KK FHHR  S EL+VFEAARYFS YNE +A        F+ K+ ++D  +
Sbjct: 3   LTLSDTDKIYKKSFHHRNDSGELDVFEAARYFSGYNEAAAAA------FSQKILREDHRQ 62

Query: 120 GWIKGRISLDMQVKN--ILNLPEH-------FPQHSYNVEKHVTKEKKYKQPSSPGGRLA 179
            W  GRISLD+ +++  +  LP+H       + + S N  +   KEKKYKQPSSPGGRLA
Sbjct: 63  AWRGGRISLDVPLRDSVLQQLPQHHANNAISYQKQSLNTIEKQMKEKKYKQPSSPGGRLA 122

Query: 180 SFLNSLFSHSSSKKKKSKLFAQSVEDIAEDESRTSKRRISISHFRSSNAAA-TDAKFIYS 239
           SFLNSLFS S SKKKKSK   QS++D  E      KRR S+SHFRSS+    + +K +YS
Sbjct: 123 SFLNSLFSQSGSKKKKSKSTTQSLKDEEESPGGRRKRRSSVSHFRSSSTTTDSSSKSLYS 182

Query: 240 SSPGNNSGFRTPPPHVQTPTKSYKELLSFSKFTRHVKSAETLEKRASKQ----------- 299
           SS   +SGFRTPP +  TPTKSYK+  S+S     V+S    +     Q           
Sbjct: 183 SS---SSGFRTPPAYAYTPTKSYKDFRSYSDHKHQVESLSLSKHNIGGQVVLKPTTALLQ 242

Query: 300 --------------KKKNLSNCSSEKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDD 359
                         K  N +N    K R WV++   +E   K+ +KF+         + D
Sbjct: 243 NNEVTTILDHHDNFKFNNNTNSEKHKTRNWVDQYSSEE---KEFRKFD---------EVD 302

Query: 360 DGGETDSSSDLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSISNG 369
           DG ++DSSSDLFELQ YDL  YS+GLPVYE+T +DSIKR   ISNG
Sbjct: 303 DGADSDSSSDLFELQNYDLGIYSSGLPVYETTHMDSIKRGAPISNG 327

[Close]

BLAST of CmoCh05G004810 vs. TAIR10
Match: AT1G69160.1 (AT1G69160.1 unknown protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-34
Identity = 118/329 (35.87%), Postives = 180/329 (54.71%), Query Frame = 1


Query: 61  SLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKDK--- 120
           S  S ++  +    H+R S+EL+VFEAA YF  YNE S+  +  + K+     +++    
Sbjct: 8   SAESDKLSRRISLTHKRNSEELDVFEAAVYFG-YNEASSGDHGHTQKYGYNAAREENPRR 67

Query: 121 -GWIKG--RISLDMQVK---NILNLPE-HFPQHSYNVEKHVTKEKKYKQPSSPGGRLASF 180
            G + G  RISLD+ ++    + +L + H  +H     K      ++KQPSSPGG++ASF
Sbjct: 68  WGILGGGRRISLDLPIRCSEQVYHLQQDHHEKHEVTTIKERLGNVRHKQPSSPGGKIASF 127

Query: 181 LNSLFSHSSSKKKKSKLFAQS-------VEDIAEDESRTSKRRISISHFRSSN------- 240
           LNSLF  + SKK KSK  +++        E+I        +RR SISHF SS+       
Sbjct: 128 LNSLFHQAGSKKNKSKSKSKTKPTDPEVEEEIPGGGWMRRRRRSSISHFFSSSRSTSTTT 187

Query: 241 --AAATDAKFIYSSSPGNNSGFRTPPPHVQTPTKSYKELLSFSKFTRHVKSAETLEKRAS 300
              A++ +K + SSS   +SGFRTPPP++ TPTK+YK+ L+++  T+ V   ET   +  
Sbjct: 188 TTTASSSSKSLISSS---SSGFRTPPPYLNTPTKNYKQFLNYTSATKQVGEEETKTNKEY 247

Query: 301 K--QKKKNLSNCSSEKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDSSSD 360
               +K  +    SE  R+W +    D++ + K +             +DDG E+DSSSD
Sbjct: 248 SWLDEKLKVMESLSENQRIWSDDEDIDDDRRIKRE------------GEDDGMESDSSSD 307

Query: 361 LFELQIYDLDYYSNGLPVYESTDIDSIKR 362
           LFELQ Y+L     GLPVYE+T++ +I +
Sbjct: 308 LFELQNYELS--RGGLPVYETTNVANINK 318

[Close]

BLAST of CmoCh05G004810 vs. TAIR10
Match: AT1G54200.1 (AT1G54200.1 unknown protein)

HSP 1 Score: 50.8 bits (120), Expect = 2.1e-06
Identity = 96/350 (27.43%), Postives = 148/350 (42.29%), Query Frame = 1


Query: 35  SFNSSIYIAFYTKV---CTISSPFRRTKMSLSSSEMINKKMFHHRRASKELEVFEAARYF 94
           SF+S++    Y  +    T SS  R+TK        ++         SK L+  E   +F
Sbjct: 27  SFSSTLLDQIYRSIDDSSTNSSSMRKTKHQNREDTRVSANRRDDFNRSKNLKTIEPV-FF 86

Query: 95  SDYNETSATMNSFSTKFTPKVKKKDKGWIKGRISLDMQVKNILNLPEHFPQH----SYNV 154
              + +S+  + FS+  +    ++ K      IS    ++  +   E  PQ+    S N 
Sbjct: 87  KHSSSSSSDSSGFSSSESDYFYRRSKS--SPAISHPKPIRTTVERFERSPQNHRPNSSNK 146

Query: 155 EKH----VTKEK---------KYKQPSSPGGRLASFLNSLFSHSSSKKKKSKLFAQSVED 214
           ++H     TK K         K KQP SPGGRLA+FLNS+F+ + + KK +K+       
Sbjct: 147 QEHGSFLKTKSKALKIYSDLKKVKQPISPGGRLATFLNSIFTGAGNTKKLNKINTTVTST 206

Query: 215 IAEDESRTSKRRI-SISHFRSSNAAATDAKFIYSSSPGNNSGFRTPPPHVQTPTKSYKEL 274
            A   + +S     S S F  S  + T      SSS  +    R  P +V     S    
Sbjct: 207 TAAAAAASSTTTCSSASSFSRSCLSKTP-----SSSEKSKRSVRFCPVNVIFDEDS---- 266

Query: 275 LSFSKFTRHVKSAETLEKRASKQKKKNLSNCSSEKDRVWVE--KPLGDEEMKKKLKKFEH 334
              SK+           +R  +  +  L N   E++R  +E  K L     KK  +  E 
Sbjct: 267 ---SKYNNKNNKVYGNNEREYESIRHTLENRVMEENRRVIEAAKELLRSYQKKNKEVIEV 326

Query: 335 DINIIDDIDDDDGGETDSSSDLFE---LQIYDLDYYSNGLPVYESTDIDS 359
            +   D+ DDDD   + +SSDLFE   L    +D Y   LPVYE+T +++
Sbjct: 327 SVE-DDEEDDDDDALSCTSSDLFELDNLSAIGIDRYREELPVYETTRLNT 360

[Close]

BLAST of CmoCh05G004810 vs. NCBI nr
Match: gi|449453025|ref|XP_004144259.1| (PREDICTED: uncharacterized protein LOC101221232 [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 2.8e-130
Identity = 266/338 (78.70%), Postives = 285/338 (84.32%), Query Frame = 1


Query: 60  MSLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKDKGW 119
           MSLSSSE+INKKMFHHRRASKEL+VFEAARYFSDYNETSA+ +SF  KFTPK+KKKDKGW
Sbjct: 1   MSLSSSEIINKKMFHHRRASKELDVFEAARYFSDYNETSASTSSFGAKFTPKMKKKDKGW 60

Query: 120 IKGRISLDMQVKNILNLPEHFPQH-SYNVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHS 179
           IKGRISLDMQVKNILNLP+HFPQH SY+VEK VTKEKKYKQPSSPGGRLASFLNS+FSHS
Sbjct: 61  IKGRISLDMQVKNILNLPQHFPQHDSYSVEKQVTKEKKYKQPSSPGGRLASFLNSIFSHS 120

Query: 180 SSKKKKSKLFAQSV-EDIAEDESRTSKRRISISHFRSSNAAATDAKFIYSSSP-GNNSGF 239
           SSKKKKSK FAQS+ ED+ +DESRTSKRRISISHFR+SNA ATDAKFIYSSSP  NNSGF
Sbjct: 121 SSKKKKSKHFAQSMDEDMEDDESRTSKRRISISHFRTSNATATDAKFIYSSSPRNNNSGF 180

Query: 240 RTPPPHVQTPTKSYKELLSFSKFTRHVKSAETLEK---------------RASKQKKKNL 299
           RTPPPHVQTPTKSYKELLSFSKF R VKSAE LEK                  K KK NL
Sbjct: 181 RTPPPHVQTPTKSYKELLSFSKFNRLVKSAEALEKPSMDDKRIRKDKGVVEKQKMKKNNL 240

Query: 300 S--NCSSEKDRVWVEKPLGDEEMKKKLKKFEHDIN--------IIDDIDDDDGGETDSSS 359
           S  NC SEKDRVWVEK L   EMKKKL+KF+H+IN          +D ++DDGGETDSSS
Sbjct: 241 SNNNCCSEKDRVWVEKNLVGGEMKKKLRKFDHEINKNNTVGGHNNNDDEEDDGGETDSSS 300

Query: 360 DLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSISNGV 370
           DLFELQIYDLDYYSNGLPVYESTDIDSIKRRNS+SN V
Sbjct: 301 DLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSVSNAV 338

[Close]

BLAST of CmoCh05G004810 vs. NCBI nr
Match: gi|659089306|ref|XP_008445437.1| (PREDICTED: uncharacterized protein LOC103488458 [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 3.8e-63
Identity = 145/199 (72.86%), Postives = 157/199 (78.89%), Query Frame = 1


Query: 193 EDIAEDESRTSKRRISISHFRSSNAAATDAKFIYSSSP-GNNSGFRTPPPHVQTPTKSYK 252
           ED+ +DESRTSKRRISISHFR+SNA ATDAKFIYSSSP  NNSGFRTPPPHVQTPTKSYK
Sbjct: 3   EDMEDDESRTSKRRISISHFRTSNATATDAKFIYSSSPKNNNSGFRTPPPHVQTPTKSYK 62

Query: 253 ELLSFSKFTRHVKSAETLE------KRASKQK------KKNLSNCSSEKDRVWVEKPLGD 312
           ELLSFSKF R VKSAE LE      KR  K K      K   +NC SEKDRVWVEK L  
Sbjct: 63  ELLSFSKFNRLVKSAEALEKPTMDDKRIRKDKGVVEKQKMKKNNCCSEKDRVWVEKNLVG 122

Query: 313 EEMKKKLKKFEHDINIIDDI---------DDDDGGETDSSSDLFELQIYDLDYYSNGLPV 370
           EEMKKKL+KF+H+IN  ++          ++DDGGETDSSSDLFELQIYDLDYYSNGLPV
Sbjct: 123 EEMKKKLRKFDHEINKNNNSVGDHNNHNDEEDDGGETDSSSDLFELQIYDLDYYSNGLPV 182

[Close]

BLAST of CmoCh05G004810 vs. NCBI nr
Match: gi|694331538|ref|XP_009356443.1| (PREDICTED: uncharacterized protein LOC103947275 [Pyrus x bretschneideri])

HSP 1 Score: 229.6 bits (584), Expect = 9.1e-57
Identity = 158/323 (48.92%), Postives = 213/323 (65.94%), Query Frame = 1


Query: 65  SEMINKKMFHHRRASKELEVFEAARYFSDYNET-SATMNSFSTKFTPKVKKKDKG-WIKG 124
           ++ I+KK+FHHR  S EL+VFEAARYFS YNET S+  N+ ++ F+ ++ K+D+  W  G
Sbjct: 15  ADKIHKKLFHHRNDSGELDVFEAARYFSGYNETPSSHKNNKTSAFSQRMMKEDRSSWRGG 74

Query: 125 RISLDMQVKNILNLPEHFPQHSYNV--EKHVT-KEKKYKQPSSPGGRLASFLNSLFSHSS 184
           RISLDM ++++L+ P+  P H  +V  EK    K+KKYKQPSSPGGRLASFLNSLF+ S+
Sbjct: 75  RISLDMPIRHMLHHPQQNPNHHNHVAMEKQSNIKDKKYKQPSSPGGRLASFLNSLFNQSA 134

Query: 185 SKKKKSKLFA-QSVEDIAEDESRTSKRRISISHFRSSNAAATDAKFIYSSSPGNNSGFRT 244
           SKKKKSK  A QS++D  E      KRR SISHFRSS  + TDAK +YSSS   +SGFRT
Sbjct: 135 SKKKKSKSSATQSMKDEEESPGGRRKRRSSISHFRSS--STTDAKSVYSSS---SSGFRT 194

Query: 245 PPP--HVQ-TPTKSYKELLSFS-----KFTRHVKSAETLEKRASKQKKKNLSNCSSEKDR 304
           PPP  H Q   + SYK+L S+S     ++ +  +  +T+    SK   K     SS K+ 
Sbjct: 195 PPPYSHAQMVASNSYKDLRSYSDNHKQQYQQQQQQQQTVS--LSKYNTKFDEKRSSNKEL 254

Query: 305 VWVE----------KPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDSSSDLFELQIYD 364
            W++          K   D++ K  LK+      ++DD  +D+G E+DSSSDLFELQ YD
Sbjct: 255 TWLDHEKFKLSEKYKISSDQDHKGLLKRLS---EVVDDEQEDEGAESDSSSDLFELQNYD 314

[Close]

BLAST of CmoCh05G004810 vs. NCBI nr
Match: gi|225423416|ref|XP_002263547.1| (PREDICTED: uncharacterized protein LOC100266436 [Vitis vinifera])

HSP 1 Score: 227.3 bits (578), Expect = 4.5e-56
Identity = 162/338 (47.93%), Postives = 211/338 (62.43%), Query Frame = 1


Query: 61  SLSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKDKGWI 120
           +LS ++ I KK FH R  S EL+VFEAARYFS  NE     N  +      ++++ +GW 
Sbjct: 5   ALSEADKIYKKSFHRRNDSGELDVFEAARYFSGGNEIIG-YNGAAFPQRMMMREERQGWR 64

Query: 121 KGRISLDMQVKNILNLPEHFPQHSYNVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHSSS 180
            GRISLDM +++  +LP    Q S+ VEK + ++ KYKQPSSPGGRLASFLNSLF+ ++S
Sbjct: 65  GGRISLDMPMRS--SLPT---QSSHAVEKQMKEKIKYKQPSSPGGRLASFLNSLFNQTNS 124

Query: 181 KKKKSKLFAQSVEDIAEDESRTSKRRISISHFRSSNAAATDAKFIYSSSPGNNSGFRTPP 240
           KKKKSK  AQS++D  E      KRR SISHFRSS+ A  D+K +YSSS   +SGFRTPP
Sbjct: 125 KKKKSKSTAQSIKDEEESPGGRRKRRSSISHFRSSSTA--DSKSVYSSS---SSGFRTPP 184

Query: 241 PHVQTPTKSYKELLSFSKFTR----------HVKSA----ETLEKRASK----------- 300
           P+  TPTK+YK+L S+S   +          +VK+     E L+++  K           
Sbjct: 185 PYANTPTKTYKDLRSYSDHRQVVSLPNYNNGNVKATGLRNEALDEKRIKELVWLDEKFKF 244

Query: 301 -----QKKKNLSNCSSEKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDSS 360
                +K KN SN  SEKDR+WV++   +E+  +KL          D+I  D G E+DSS
Sbjct: 245 SSGFSEKHKNFSNGLSEKDRIWVDEYPSEEKEFRKL----------DEI--DAGAESDSS 304

Query: 361 SDLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSISNG 369
           SDLFELQ YDL  YS+GLPVYE+T +DSIKR   ISNG
Sbjct: 305 SDLFELQNYDLGCYSSGLPVYETTHMDSIKRGAPISNG 319

[Close]

BLAST of CmoCh05G004810 vs. NCBI nr
Match: gi|255541978|ref|XP_002512053.1| (PREDICTED: protein BIG GRAIN 1-like E [Ricinus communis])

HSP 1 Score: 226.9 bits (577), Expect = 5.9e-56
Identity = 160/339 (47.20%), Postives = 203/339 (59.88%), Query Frame = 1


Query: 62  LSSSEMINKKMFHHRRASKELEVFEAARYFSDYNETSATMNSFSTKFTPKVKKKD--KGW 121
           L  +  + KK  H R  S EL+VFEAARYFS YNE +         +T K+ + D    W
Sbjct: 6   LPDTSKLYKKSLHRRNDSDELDVFEAARYFSGYNEAAGYNGG---TYTQKILRDDYRHPW 65

Query: 122 IKGRISLDMQVKNILNLPEHFPQHSYNVEKHVTKEKKYKQPSSPGGRLASFLNSLFSHSS 181
             GR+SLD+ ++N   LP+    H + VEK + KEKKYKQPSSPGGRLASFLNSLF+ +S
Sbjct: 66  RGGRMSLDVPMRN--PLPQQTHSHHHTVEKQILKEKKYKQPSSPGGRLASFLNSLFNQTS 125

Query: 182 SKKKKSKLFAQSVEDIAEDESRTSKRRISISHFRSSNAAATDAKFIYSSSPGNNSGFRTP 241
           SKKKKSK   QS +D  E      KRR SISHFRS++ A  D K +YSSS   +SGFRTP
Sbjct: 126 SKKKKSKSATQSTKDDDESPGGRRKRRSSISHFRSTSTA--DTKSLYSSS---SSGFRTP 185

Query: 242 PPHVQTPTKSYKEL---------LSFSKFTRHVKSA----ETLEKR-------------- 301
           PP+  TPTKSYK+L         +S S    +VKS     E L+++              
Sbjct: 186 PPYANTPTKSYKDLRSYSDHKQVISLSMQNGNVKSTGLQNEVLDEKKKTDLSWLDEKFKI 245

Query: 302 --ASKQKKKNLSNCSS-EKDRVWVEKPLGDEEMKKKLKKFEHDINIIDDIDDDDGGETDS 361
             A  +K KNL N    EKDR+WV++   +E   K  +KF+         + DDG ++DS
Sbjct: 246 SDALSEKTKNLGNHRYLEKDRIWVDQYPSEE---KGFRKFD---------EVDDGADSDS 305

Query: 362 SSDLFELQIYDLDYYSNGLPVYESTDIDSIKRRNSISNG 369
           SSDLFELQ YDL  YS+GLPVYE+T++DSIK+   ISNG
Sbjct: 306 SSDLFELQNYDLGIYSSGLPVYETTNMDSIKKGAPISNG 322

The following BLAST results are available for this feature:

BLAST of CmoCh05G004810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BIG1E_ARATH	3.2e-33	35.87	Protein BIG GRAIN 1-like E OS=Arabidopsis thaliana GN=At1g69160 PE=2 SV=1	[more]

BLAST of CmoCh05G004810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD85_CUCSA	1.9e-130	78.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366580 PE=4 SV=1	[more]
F6HF00_VITVI	3.2e-56	47.93	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g00120 PE=4 SV=...	[more]
B9REB4_RICCO	4.1e-56	47.20	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1619950 PE=4 SV=1	[more]
V4VF59_9ROSI	4.6e-55	45.09	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032087mg PE=4 SV=1	[more]
A0A067FSJ1_CITSI	6.0e-55	44.80	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020192mg PE=4 SV=1	[more]

BLAST of CmoCh05G004810 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69160.1	1.8e-34	35.87	unknown protein	[more]
AT1G54200.1	2.1e-06	27.43	unknown protein	[more]

BLAST of CmoCh05G004810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453025\|ref\|XP_004144259.1\|	2.8e-130	78.70	PREDICTED: uncharacterized protein LOC101221232 [Cucumis sativus]	[more]
gi\|659089306\|ref\|XP_008445437.1\|	3.8e-63	72.86	PREDICTED: uncharacterized protein LOC103488458 [Cucumis melo]	[more]
gi\|694331538\|ref\|XP_009356443.1\|	9.1e-57	48.92	PREDICTED: uncharacterized protein LOC103947275 [Pyrus x bretschneideri]	[more]
gi\|225423416\|ref\|XP_002263547.1\|	4.5e-56	47.93	PREDICTED: uncharacterized protein LOC100266436 [Vitis vinifera]	[more]
gi\|255541978\|ref\|XP_002512053.1\|	5.9e-56	47.20	PREDICTED: protein BIG GRAIN 1-like E [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G004810.1	CmoCh05G004810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33541	FAMILY NOT NAMED	coord: 62..369 score: 3.7
None	No IPR available	PANTHER	PTHR33541:SF3	SUBFAMILY NOT NAMED	coord: 62..369 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G004810	Cucsa.327960	Cucumber (Gy14) v1	cgycmoB0907
CmoCh05G004810	CmaCh05G004550	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G004810	Cla022035	Watermelon (97103) v1	cmowmB746
CmoCh05G004810	Csa6G366580	Cucumber (Chinese Long) v2	cmocuB796
CmoCh05G004810	MELO3C011411	Melon (DHL92) v3.5.1	cmomeB715
CmoCh05G004810	ClCG08G010520	Watermelon (Charleston Gray)	cmowcgB713
CmoCh05G004810	CSPI06G19770	Wild cucumber (PI 183967)	cmocpiB800
CmoCh05G004810	Lsi08G009050	Bottle gourd (USVL1VR-Ls)	cmolsiB728
CmoCh05G004810	Cp4.1LG11g04060	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G004810	MELO3C011411.2	Melon (DHL92) v3.6.1	cmomedB812
CmoCh05G004810	CsaV3_6G033770	Cucumber (Chinese Long) v3	cmocucB0937
CmoCh05G004810	Cla97C08G153370	Watermelon (97103) v2	cmowmbB800
CmoCh05G004810	Bhi04G000927	Wax gourd	cmowgoB0941
CmoCh05G004810	CsGy6G019320	Cucumber (Gy14) v2	cgybcmoB825
CmoCh05G004810	Carg09258	Silver-seed gourd	carcmoB0196

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G004810	Cucurbita maxima (Rimu)	cmacmoB192
CmoCh05G004810	Cucurbita pepo (Zucchini)	cmocpeB744
CmoCh05G004810	Silver-seed gourd	carcmoB0894
CmoCh05G004810	Wax gourd	cmowgoB0951
CmoCh05G004810	Cucurbita moschata (Rifu)	cmocmoB150