CmoCh05G004210 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTAACTTTCCCACGCGCGCGTGGACGTTTCTCGATACTCATCCGTAGATCTCCACAATTTTCAGATCAGGAACTCTCTTCCTCCAGGGTTCAGACCGGCGGATTTCAGATCAAATCGAAGTCATCTGAGTAAATAACTGCGACGATCTCAGAATTAAGATCGGAGATTGATAGATAACCATGTCGAGCGCCGTCTTGGTTGCACGCTCTAGCTCCTGGTCTCGTGCTCTCATCAACATCTCTCCGTACACCTTCTCTGCCGTTGGCATCGCCATCGCCATCGGCGTTTCTGTCCTCGGTGCAGCCTGGTGCTGTCCTGAACCTATCTTGTTACGTACTCTTTGTGTTTCTCCTGATGAATGTTTATTTTGATAATTTCCTTGCGGTGTTGCGAATTTGGTAGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGGTGAAGACCCTTAGTTGATGAATTGTTCATTTTCCTATTGAATCGATTGCTACTTTTAAGATGGTCGGGTCGGGATATAGAATTTGGGATTCTTATTGCTTAATTATTGGATTGATACAGCCGAGAACGATTAAACTCGTAAGGTTTTATGACTTTATTTTAGTTTTGAATCTATTAGAACATAATTGAGCACGAGTCTAGTGTTTTTTGGGGAAAAAAATTGTTGAATGTAAGTGTAAATTCCTTCTAGCGTCTGCCTCTACCAGCTCGAATGATCCAACAAGTTTCATTGCCGACGTTAAGCATTAAGCTACATTTTTCTGGTGATTACTTCGATTATAACAACTTGAATGTTGTGTTCTTTCAGCGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTTATTGTTGCGATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAAATCTATGCCCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCTAACCTTGTCTGCGGGTTTGATGGCCTCCCCTTTACTTTTATTTTCAATAAAAACTCTTAAATTAGGCACTTTAAGATTCTTTTACTTCTTATTTTGATTGTTTGTTTTTGAATCTCTTCTGATGCTTTGTTTGAAGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAAAACTCCTCCCTCTTCGTGAAGATTCTAGTAATCGAGATCTTTGGCAGTGCACTTGGGTTGTTCGGAGTGATCGTCGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGACAGGTTGATGATCTGCCTCTCGGATTTCAAACACGAAATGTTGAAGTTCAATCATAATGGAGCCAGGGTAACTTGTTTTTCTACTCTTAAGCTCTGCAGTTTCCCTCTTCAATAGATATATGATATTCTTGTATAATCTAGAGTGGGAAGTGTATATGCATCTTTTAATTATCTGAGCATCATTCATCTTCCCTTGGAGAACCATTTCAATCATTCTGATGTTGGTTTTAAATATTTCTCCTGTTGCCTTCTTTTTCAATCATTCTGTTCTGGTTCTTTGAAAACACTGGAAATATTCAATAATTCACAGGAGGAAGCCAATGTAGTAGGATTGCTTCCTTTCCCGACGTGTATAACGTATTTTCCTGCAAAATCTGCCTGTCTTCGTTTCATGAATCTTTTTTGATCCAATGATAGTCTTGATATTCAT TTTTTTAACTTTCCCACGCGCGCGTGGACGTTTCTCGATACTCATCCGTAGATCTCCACAATTTTCAGATCAGGAACTCTCTTCCTCCAGGGTTCAGACCGGCGGATTTCAGATCAAATCGAAGTCATCTGAGTAAATAACTGCGACGATCTCAGAATTAAGATCGGAGATTGATAGATAACCATGTCGAGCGCCGTCTTGGTTGCACGCTCTAGCTCCTGGTCTCGTGCTCTCATCAACATCTCTCCGTACACCTTCTCTGCCGTTGGCATCGCCATCGCCATCGGCGTTTCTGTCCTCGGTGCAGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGCGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTTATTGTTGCGATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAAATCTATGCCCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCTAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAAAACTCCTCCCTCTTCGTGAAGATTCTAGTAATCGAGATCTTTGGCAGTGCACTTGGGTTGTTCGGAGTGATCGTCGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGACAGGTTGATGATCTGCCTCTCGGATTTCAAACACGAAATGTTGAAGTTCAATCATAATGGAGCCAGGGTAACTTGTTTTTCTACTCTTAAGCTCTGCAGTTTCCCTCTTCAATAGATATATGATATTCTTGTATAATCTAGAGTGGGAAGTGTATATGCATCTTTTAATTATCTGAGCATCATTCATCTTCCCTTGGAGAACCATTTCAATCATTCTGATGTTGGTTTTAAATATTTCTCCTGTTGCCTTCTTTTTCAATCATTCTGTTCTGGTTCTTTGAAAACACTGGAAATATTCAATAATTCACAGGAGGAAGCCAATGTAGTAGGATTGCTTCCTTTCCCGACGTGTATAACGTATTTTCCTGCAAAATCTGCCTGTCTTCGTTTCATGAATCTTTTTTGATCCAATGATAGTCTTGATATTCAT ATGTCGAGCGCCGTCTTGGTTGCACGCTCTAGCTCCTGGTCTCGTGCTCTCATCAACATCTCTCCGTACACCTTCTCTGCCGTTGGCATCGCCATCGCCATCGGCGTTTCTGTCCTCGGTGCAGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGCGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTTATTGTTGCGATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAAATCTATGCCCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCTAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAAAACTCCTCCCTCTTCGTGAAGATTCTAGTAATCGAGATCTTTGGCAGTGCACTTGGGTTGTTCGGAGTGATCGTCGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGACAGGTTGA
BLAST of CmoCh05G004210 vs. Swiss-Prot
Match: VATO1_ARATH (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana GN=VHA-c''1 PE=1 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 1.9e-76 Identity = 157/180 (87.22%), Postives = 168/180 (93.33%), Query Frame = 1
BLAST of CmoCh05G004210 vs. Swiss-Prot
Match: VATO2_ARATH (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana GN=VHA-c''2 PE=1 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 2.8e-75 Identity = 154/171 (90.06%), Postives = 164/171 (95.91%), Query Frame = 1
BLAST of CmoCh05G004210 vs. Swiss-Prot
Match: VATO_YEAST (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA16 PE=1 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 4.7e-46 Identity = 94/165 (56.97%), Postives = 135/165 (81.82%), Query Frame = 1
BLAST of CmoCh05G004210 vs. Swiss-Prot
Match: VATO_MOUSE (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0b PE=1 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 4.4e-44 Identity = 94/160 (58.75%), Postives = 127/160 (79.38%), Query Frame = 1
BLAST of CmoCh05G004210 vs. Swiss-Prot
Match: VATO_HUMAN (V-type proton ATPase 21 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0B PE=2 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 7.4e-44 Identity = 93/160 (58.13%), Postives = 126/160 (78.75%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TrEMBL
Match: A0A0A0LQ28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379870 PE=3 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 1.1e-83 Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TrEMBL
Match: V4UCM0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009643mg PE=3 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.1e-81 Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TrEMBL
Match: Q84V02_CITLI (Vacuolar membrane ATPase subunit c'' OS=Citrus limon GN=VMA16 PE=2 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 5.3e-81 Identity = 169/180 (93.89%), Postives = 175/180 (97.22%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TrEMBL
Match: M5XT54_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012193mg PE=3 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 7.7e-80 Identity = 167/180 (92.78%), Postives = 175/180 (97.22%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TrEMBL
Match: A0A067KF68_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07209 PE=3 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 1.7e-79 Identity = 167/180 (92.78%), Postives = 173/180 (96.11%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TAIR10
Match: AT2G25610.1 (AT2G25610.1 ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 282.7 bits (722), Expect = 1.6e-76 Identity = 154/171 (90.06%), Postives = 164/171 (95.91%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TAIR10
Match: AT4G32530.2 (AT4G32530.2 ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 270.8 bits (691), Expect = 6.2e-73 Identity = 157/210 (74.76%), Postives = 168/210 (80.00%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TAIR10
Match: AT1G19910.1 (AT1G19910.1 ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16 Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TAIR10
Match: AT2G16510.1 (AT2G16510.1 ATPase, F0/V0 complex, subunit C protein) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16 Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 1
BLAST of CmoCh05G004210 vs. TAIR10
Match: AT4G38920.1 (AT4G38920.1 vacuolar-type H(+)-ATPase C3) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16 Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 1
BLAST of CmoCh05G004210 vs. NCBI nr
Match: gi|449441944|ref|XP_004138742.1| (PREDICTED: V-type proton ATPase subunit c''1-like [Cucumis sativus]) HSP 1 Score: 317.4 bits (812), Expect = 1.6e-83 Identity = 175/182 (96.15%), Postives = 180/182 (98.90%), Query Frame = 1
BLAST of CmoCh05G004210 vs. NCBI nr
Match: gi|659088760|ref|XP_008445147.1| (PREDICTED: V-type proton ATPase subunit c'' [Cucumis melo]) HSP 1 Score: 317.0 bits (811), Expect = 2.1e-83 Identity = 174/182 (95.60%), Postives = 180/182 (98.90%), Query Frame = 1
BLAST of CmoCh05G004210 vs. NCBI nr
Match: gi|567917052|ref|XP_006450532.1| (hypothetical protein CICLE_v10009643mg [Citrus clementina]) HSP 1 Score: 310.8 bits (795), Expect = 1.5e-81 Identity = 170/180 (94.44%), Postives = 176/180 (97.78%), Query Frame = 1
BLAST of CmoCh05G004210 vs. NCBI nr
Match: gi|985445777|ref|XP_015385140.1| (PREDICTED: V-type proton ATPase subunit c''1 [Citrus sinensis]) HSP 1 Score: 308.5 bits (789), Expect = 7.6e-81 Identity = 169/180 (93.89%), Postives = 175/180 (97.22%), Query Frame = 1
BLAST of CmoCh05G004210 vs. NCBI nr
Match: gi|596298646|ref|XP_007227527.1| (hypothetical protein PRUPE_ppa012193mg [Prunus persica]) HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79 Identity = 167/180 (92.78%), Postives = 175/180 (97.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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