CmoCh02G003530 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATTCGTTTACCGTCGTCTTTGATTCATCATGCCAAGCAAATGCTAAAGATGCGAAACCCGTTGAATGTTCCAAGAGGTCATATTGCAGTATATGTGGGCGAGATCGATATTCAGAGGAAACGGTTCGTAGTTCCGATATCTTTCTTAAACCATCCGTCATTTAAACAACTTCTTAGCCATGCTGAGGAAGAGTTCGGATTCCATCATCCACCGGGAGGTCTAACTATTCCTTGCAAAGAAGATGCGTTTATCGATCTTACTTCTAGATTTCATCATGCTTGA ATGGGAATTCGTTTACCGTCGTCTTTGATTCATCATGCCAAGCAAATGCTAAAGATGCGAAACCCGTTGAATGTTCCAAGAGGTCATATTGCAGTATATGTGGGCGAGATCGATATTCAGAGGAAACGGTTCGTAGTTCCGATATCTTTCTTAAACCATCCGTCATTTAAACAACTTCTTAGCCATGCTGAGGAAGAGTTCGGATTCCATCATCCACCGGGAGGTCTAACTATTCCTTGCAAAGAAGATGCGTTTATCGATCTTACTTCTAGATTTCATCATGCTTGA ATGGGAATTCGTTTACCGTCGTCTTTGATTCATCATGCCAAGCAAATGCTAAAGATGCGAAACCCGTTGAATGTTCCAAGAGGTCATATTGCAGTATATGTGGGCGAGATCGATATTCAGAGGAAACGGTTCGTAGTTCCGATATCTTTCTTAAACCATCCGTCATTTAAACAACTTCTTAGCCATGCTGAGGAAGAGTTCGGATTCCATCATCCACCGGGAGGTCTAACTATTCCTTGCAAAGAAGATGCGTTTATCGATCTTACTTCTAGATTTCATCATGCTTGA
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 7.9e-21 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 1
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 7.9e-21 Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 1
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU15_ARATH (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 7.9e-21 Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = 1
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.0e-20 Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 1
BLAST of CmoCh02G003530 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 5.1e-20 Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A0A0LIY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258660 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 5.5e-45 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.1e-32 Identity = 75/100 (75.00%), Postives = 83/100 (83.00%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.0e-31 Identity = 71/96 (73.96%), Postives = 82/96 (85.42%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 8.4e-30 Identity = 68/96 (70.83%), Postives = 82/96 (85.42%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TrEMBL
Match: A0A067DUU5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040932mg PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.4e-29 Identity = 71/100 (71.00%), Postives = 79/100 (79.00%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 113.6 bits (283), Expect = 6.6e-26 Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.2 bits (274), Expect = 7.3e-25 Identity = 54/92 (58.70%), Postives = 70/92 (76.09%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 108.6 bits (270), Expect = 2.1e-24 Identity = 53/95 (55.79%), Postives = 72/95 (75.79%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 105.9 bits (263), Expect = 1.4e-23 Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 1
BLAST of CmoCh02G003530 vs. TAIR10
Match: AT4G34770.1 (AT4G34770.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 102.4 bits (254), Expect = 1.5e-22 Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 1
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|778669577|ref|XP_011649269.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 188.0 bits (476), Expect = 7.8e-45 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 1
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|659115584|ref|XP_008457628.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 184.1 bits (466), Expect = 1.1e-43 Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 1
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus]) HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32 Identity = 75/100 (75.00%), Postives = 83/100 (83.00%), Query Frame = 1
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 144.1 bits (362), Expect = 1.3e-31 Identity = 74/100 (74.00%), Postives = 83/100 (83.00%), Query Frame = 1
BLAST of CmoCh02G003530 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 143.7 bits (361), Expect = 1.7e-31 Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |