CmoCh02G000440 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGAATTCCCTTTCTATTTTGGCGGTTTGTGGAGGAAAGCTTTTTGGAGGGCTTATACTCGCAGGCGAATCCGCAACATCGATTAATCGCTTGGAACTGAGAACCCTTTCGCCCTTTTGACATTTTGGAGGTAAAACTCTCGCCGTTGAATTAATTTATACTATTATTCGATCTAACTCGAGAAATTATGTGTTCGTCTTTTGGGAAAGAAGGGGATATAAACAAGAGAAGAGAAGGGAGGATTGCTCTTCTTCATATTTTGATCTGATTTTCTTGATTAACGTCGAAAAATTCATGTTCTCACGATCTTTTCGTGCAATCCCAGGTTTCAGATGTTTCTAAATCACAAAGAATCAGCTCCTCAAATTGCTTTGGATTAATTGTTTTCAGTTTTGACAATGTTTCTAAATGTGTTAATTGTACTTGTCTCTATGAAAGAAATTGAGCAATCCTTCTAGATATTGTATCCCCTTTTGCTTTCGTCAAGAAAAGATGTGCTAGAATGAATGTGGTTATCCTAAGAGCTCTAGGCCTGGCTTGCTTGTATGGAAATGAAATTACATTTCATCATCCTTCTCGAGTCTCTGAATTCTCCTGTTCAGTAAGATAGTATTGTCCTAAATTTAGAGATTTCAACTAGTTAAATGAGTTAACAAAAAACTTAAAAGGATTGCTTTAGTAAGATATTGGGAAAGAGTGAGGCTTTGAGGTAGACTAGTTCAGTTTGATGGACTGGTTGAATAGGATCTACTAGAGGTTCTAAGACGATGGATAGTTTTGTCGCGTCAATTGTAGCATTGAAATTATTCATGATTGATCTTAGTAAGAAGCAATGTTTTCCTCTCTTCAGGTATGGTGAAGCATGGAAACAAATCAAAAGCCTGGTACAAACAGCAGACAATCTCAGTTCTCATTGTGTCTGCTTTTCTTATCCTATTTGTGTGGATGATGTTATTTCGCAAGGAGTCTCAACAGCATGATCTTTTAACTGAGGCAACTCCAAAGCAAAAGTGGGATAGCTTCAATTCTCTTGTGCAATTTAATCCAAATATACAGTTTCGGAATGGAACTGACATAATATCGCAGATTCCCGATTCACCAAAGGCAGTTTTGTTCTTTGCTCATGGCTGCAATGGAAAAGCCATTAACTTCTGGGACAAATCTCCCAAATGCCCTTCTTGTGTCGGTCTGCCTGAGGAACGGTTGATTGTCCTTCATGCGCTCAGCAGACATTTTGCAGTTCTTACAATATCAAGCTCTCAAAAATGTTGGACACTGGGGAAGGAATTAGCGATCGTGAAAGGCATAATATTTTGGTGGGTTAAAAAGAACAAACTCAAGAAACTTCCTCTTGTAGGTTTAGGTGCCTCCTCTGGTGGATATTTTCTTTCAGTGCTGGCCACTAAGTTGAAGTTTAATAGTATTACTTTGATGATTGCTGAAGGGTTGTATGAACAAATGGAAGTAACAGAAAGATACCCACCTACTCTGTTTGTGCACATGCCGAAAGATCAATTTAGGCAACAAAAGATCAATGAAAATATGGAGTTTTTGAAAAGTAAAGGAGTTGATGTTGCAGAAATTGAATGCTTGGAGTTTAGTTTGTCGCCACATTTTTTGGCTGACCGAATCCCGGGACTCAACCAGAGTGTTTCTGGTAAGTTGTTTGAGCTTTTCCAAGCCAAGGGCTTCATAGATGGAAATGGAAAGATGCTCAAAGATGGGCGGGAAACACGGTGGAAAGAAGCCCTCAAGGGGAGTGAGATTAATTTAACCGATAATAGTCTAACCCATCACATTCAAGAAGAGTTGAATCTTGCCTTTGCATACCATGAAATGACTAGCTTGGAGTCTGACAAGATTTTCACATGGTTTGAATCTCACATGAGATGATTCTATCAACATTGAAACAAAATCCAGGTTCTTAGAATCCACACCCTCCCAAACACACGCACGAGAAGAAAATGTATGTAGAATGGTTTTTTCTGTTAACAATTTTTGTAATGCTGGCGTTGATGGTTCTGTATTTATGTTTACATTGCTCAGTTAAGAAAGTTGAAGCAAGAACATGAATAAATGTTATTTTCAACTCCCATTTTGTGGTTCTGGCTGTTGCTTGTGATCTACAATCAATTTCAAATCCCCATAGCTGTAAGAAGATTATCAGGCTATATTTATGGAGAACTTTACTTATTGTTAAAGATGTATGGATTTATTTTCCTATTACTATTATTTCTGCTGTATTGCAAGGTAAAATATCAAGGGCGGTTGGTTTGATGGGAGTTCTTAAATTCGCCAACCCACCTTCTCAGAGCGCTGGAGGCTTCCTAATGACTGCAGGCTCCTCCCGGCTCTCGTTCATGAGTTTGTTTTCTGCACTTATTCTATGTTTATTTGCACCGTTGATATTTGTGATTTAGCATTTATACTGTTCACAAGAGCAAGCTCCAGTCATTGACTCAAACCAAAAGGAAACCCAAGTTTGTTTATTTATAGGTTAGCCTTATTCAATGTAGTAGATCTTTCCTCATTAATGCGCCATCTGCATACTTTGTGGATTTTGCTAACTTCTTAAAGCTTAATGACGATAAGGAAATAATGGATTAATGTAGATAACAAACACTCGAACTTTCAATTCCCGACCCCTTTAATAACATCTGATTAATCATAATGAACTAGTTGGAACAAATCTTGATTTCTCAATGAATTTGGAAACTAAAGACTGAGCATCTCTATGTTCAAATAACATGAACATAAGAGATGATAGGAACAACAAACAAGAACAAAAGAAAACATGAAATGATAAATTGGTCTCACTGTCTCACTAGTCACAAACTAACTACTAAGGCACACACACATTAATTATTAAGGTGGTAACTGGCAAGGCAAAGGGTGGGTTCAGGCTGTGAGCTTAATTTTCCCCTCGTTGGCTAATTTGAAGATGTTGGCCTGATCTGCTGCTGCTCTGTTGGAGTTAAGTGCCGAGACAAAACTTGACTGAACTTGCTTGGTTGTGAAGGGGAATCTGTTACTTGCAAGAGAGTTGAGGTATGAAGCAGTGCCTTCTCTTAAAAGAGCCCCAAACCCATCAGCCCTTGTGTTTGAAAGTGCTTGGAGTAAGTTGAGATTTGTTCCAAATCCTGGGACATTGGTTGCTCCAAAGCAGTTTCCTAACGTTCCCCACCATCCCAGTACTCCCCATATCATTCCTGGGTGATTCAGCCAAAAACTGCAAAACAAACACATATTTTTCAAACCTAAGGAGGAATGCTTTCTTTTTCATAGAAATAGTTACTGTGACTTACTTGCAGGTAAATGGAGTAGTGGG AGGAATTCCCTTTCTATTTTGGCGGTTTGTGGAGGAAAGCTTTTTGGAGGGCTTATACTCGCAGGCGAATCCGCAACATCGATTAATCGCTTGGAACTGAGAACCCTTTCGCCCTTTTGACATTTTGGAGATGGTGAAGCATGGAAACAAATCAAAAGCCTGGTACAAACAGCAGACAATCTCAGTTCTCATTGTGTCTGCTTTTCTTATCCTATTTGTGTGGATGATGTTATTTCGCAAGGAGTCTCAACAGCATGATCTTTTAACTGAGGCAACTCCAAAGCAAAAGTGGGATAGCTTCAATTCTCTTGTGCAATTTAATCCAAATATACAGTTTCGGAATGGAACTGACATAATATCGCAGATTCCCGATTCACCAAAGGCAGTTTTGTTCTTTGCTCATGGCTGCAATGGAAAAGCCATTAACTTCTGGGACAAATCTCCCAAATGCCCTTCTTGTGTCGGTCTGCCTGAGGAACGGTTGATTGTCCTTCATGCGCTCAGCAGACATTTTGCAGTTCTTACAATATCAAGCTCTCAAAAATGTTGGACACTGGGGAAGGAATTAGCGATCGTGAAAGGCATAATATTTTGGTGGGTTAAAAAGAACAAACTCAAGAAACTTCCTCTTGTAGGTTTAGGTGCCTCCTCTGGTGGATATTTTCTTTCAGTGCTGGCCACTAAGTTGAAGTTTAATAGTATTACTTTGATGATTGCTGAAGGGTTGTATGAACAAATGGAAGTAACAGAAAGATACCCACCTACTCTGTTTGTGCACATGCCGAAAGATCAATTTAGGCAACAAAAGATCAATGAAAATATGGAGTTTTTGAAAAGTAAAGGAGTTGATGTTGCAGAAATTGAATGCTTGGAGTTTAGTTTGTCGCCACATTTTTTGGCTGACCGAATCCCGGGACTCAACCAGAGTGTTTCTGGTAAGTTGTTTGAGCTTTTCCAAGCCAAGGGCTTCATAGATGGAAATGGAAAGATGCTCAAAGATGGGCGGGAAACACGGTGGAAAGAAGCCCTCAAGGGGAGTGAGATTAATTTAACCGATAATAGTCTAACCCATCACATTCAAGAAGAGTTGAATCTTGCCTTTGCATACCATGAAATGACTAGCTTGGAGTCTGACAAGATTTTCACATGGTTTGAATCTCACATGAGATGATTCTATCAACATTGAAACAAAATCCAGGTTCTTAGAATCCACACCCTCCCAAACACACGCACGAGAAGAAAATGTATGTAGAATGGTTTTTTCTGTTAACAATTTTTGTAATGCTGGCGTTGATGGTTCTGTATTTATGTTTACATTGCTCAGTTAAGAAAGTTGAAGCAAGAACATGAATAAATGTTATTTTCAACTCCCATTTTGTGGTTCTGGCTGTTGCTTGTGATCTACAATCAATTTCAAATCCCCATAGCTGTAAGAAGATTATCAGGCTATATTTATGGAGAACTTTACTTATTGTTAAAGATGTATGGATTTATTTTCCTATTACTATTATTTCTGCTGTATTGCAAGGTAAAATATCAAGGGCGGTTGGTTTGATGGGAGTTCTTAAATTCGCCAACCCACCTTCTCAGAGCGCTGGAGGCTTCCTAATGACTGCAGGCTCCTCCCGGCTCTCGTTCATGAGTTTGTTTTCTGCACTTATTCTATGTTTATTTGCACCGTTGATATTTGTGATTTAGCATTTATACTGTTCACAAGAGCAAGCTCCAGTCATTGACTCAAACCAAAAGGAAACCCAAGTTTGTTTATTTATAGGTTAGCCTTATTCAATGTAGTAGATCTTTCCTCATTAATGCGCCATCTGCATACTTTGTGGATTTTGCTAACTTCTTAAAGCTTAATGACGATAAGGAAATAATGGATTAATGTAGATAACAAACACTCGAACTTTCAATTCCCGACCCCTTTAATAACATCTGATTAATCATAATGAACTAGTTGGAACAAATCTTGATTTCTCAATGAATTTGGAAACTAAAGACTGAGCATCTCTATGTTCAAATAACATGAACATAAGAGATGATAGGAACAACAAACAAGAACAAAAGAAAACATGAAATGATAAATTGGTCTCACTGTCTCACTAGTCACAAACTAACTACTAAGGCACACACACATTAATTATTAAGGTGGTAACTGGCAAGGCAAAGGGTGGGTTCAGGCTGTGAGCTTAATTTTCCCCTCGTTGGCTAATTTGAAGATGTTGGCCTGATCTGCTGCTGCTCTGTTGGAGTTAAGTGCCGAGACAAAACTTGACTGAACTTGCTTGGTTGTGAAGGGGAATCTGTTACTTGCAAGAGAGTTGAGGTATGAAGCAGTGCCTTCTCTTAAAAGAGCCCCAAACCCATCAGCCCTTGTGTTTGAAAGTGCTTGGAGTAAGTTGAGATTTGTTCCAAATCCTGGGACATTGGTTGCTCCAAAGCAGTTTCCTAACGTTCCCCACCATCCCAGTACTCCCCATATCATTCCTGGGTGATTCAGCCAAAAACTGCAAAACAAACACATATTTTTCAAACCTAAGGAGGAATGCTTTCTTTTTCATAGAAATAGTTACTGTGACTTACTTGCAGGTAAATGGAGTAGTGGG ATGGTGAAGCATGGAAACAAATCAAAAGCCTGGTACAAACAGCAGACAATCTCAGTTCTCATTGTGTCTGCTTTTCTTATCCTATTTGTGTGGATGATGTTATTTCGCAAGGAGTCTCAACAGCATGATCTTTTAACTGAGGCAACTCCAAAGCAAAAGTGGGATAGCTTCAATTCTCTTGTGCAATTTAATCCAAATATACAGTTTCGGAATGGAACTGACATAATATCGCAGATTCCCGATTCACCAAAGGCAGTTTTGTTCTTTGCTCATGGCTGCAATGGAAAAGCCATTAACTTCTGGGACAAATCTCCCAAATGCCCTTCTTGTGTCGGTCTGCCTGAGGAACGGTTGATTGTCCTTCATGCGCTCAGCAGACATTTTGCAGTTCTTACAATATCAAGCTCTCAAAAATGTTGGACACTGGGGAAGGAATTAGCGATCGTGAAAGGCATAATATTTTGGTGGGTTAAAAAGAACAAACTCAAGAAACTTCCTCTTGTAGGTTTAGGTGCCTCCTCTGGTGGATATTTTCTTTCAGTGCTGGCCACTAAGTTGAAGTTTAATAGTATTACTTTGATGATTGCTGAAGGGTTGTATGAACAAATGGAAGTAACAGAAAGATACCCACCTACTCTGTTTGTGCACATGCCGAAAGATCAATTTAGGCAACAAAAGATCAATGAAAATATGGAGTTTTTGAAAAGTAAAGGAGTTGATGTTGCAGAAATTGAATGCTTGGAGTTTAGTTTGTCGCCACATTTTTTGGCTGACCGAATCCCGGGACTCAACCAGAGTGTTTCTGGTAAGTTGTTTGAGCTTTTCCAAGCCAAGGGCTTCATAGATGGAAATGGAAAGATGCTCAAAGATGGGCGGGAAACACGGTGGAAAGAAGCCCTCAAGGGGAGTGAGATTAATTTAACCGATAATAGTCTAACCCATCACATTCAAGAAGAGTTGAATCTTGCCTTTGCATACCATGAAATGACTAGCTTGGAGTCTGACAAGATTTTCACATGGTTTGAATCTCACATGAGATGA
BLAST of CmoCh02G000440 vs. TrEMBL
Match: A0A0A0KH09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G178940 PE=4 SV=1) HSP 1 Score: 642.9 bits (1657), Expect = 2.3e-181 Identity = 309/344 (89.83%), Postives = 330/344 (95.93%), Query Frame = 1
BLAST of CmoCh02G000440 vs. TrEMBL
Match: M5X049_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020882mg PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-129 Identity = 230/348 (66.09%), Postives = 276/348 (79.31%), Query Frame = 1
BLAST of CmoCh02G000440 vs. TrEMBL
Match: V4SRI8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031926mg PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 3.9e-125 Identity = 219/345 (63.48%), Postives = 276/345 (80.00%), Query Frame = 1
BLAST of CmoCh02G000440 vs. TrEMBL
Match: A0A0D2V1N3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G042000 PE=4 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 1.6e-123 Identity = 215/347 (61.96%), Postives = 268/347 (77.23%), Query Frame = 1
BLAST of CmoCh02G000440 vs. TrEMBL
Match: A0A061DLM8_THECC (Secretion-regulating guanine nucleotide exchange factor OS=Theobroma cacao GN=TCM_001852 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 4.8e-123 Identity = 214/346 (61.85%), Postives = 267/346 (77.17%), Query Frame = 1
BLAST of CmoCh02G000440 vs. TAIR10
Match: AT3G58800.1 (AT3G58800.1 unknown protein) HSP 1 Score: 375.9 bits (964), Expect = 2.6e-104 Identity = 185/327 (56.57%), Postives = 247/327 (75.54%), Query Frame = 1
BLAST of CmoCh02G000440 vs. NCBI nr
Match: gi|449450852|ref|XP_004143176.1| (PREDICTED: uncharacterized protein LOC101217366 isoform X1 [Cucumis sativus]) HSP 1 Score: 642.9 bits (1657), Expect = 3.2e-181 Identity = 309/344 (89.83%), Postives = 330/344 (95.93%), Query Frame = 1
BLAST of CmoCh02G000440 vs. NCBI nr
Match: gi|778713742|ref|XP_011657111.1| (PREDICTED: uncharacterized protein LOC101217366 isoform X2 [Cucumis sativus]) HSP 1 Score: 634.8 bits (1636), Expect = 8.8e-179 Identity = 305/340 (89.71%), Postives = 326/340 (95.88%), Query Frame = 1
BLAST of CmoCh02G000440 vs. NCBI nr
Match: gi|659112903|ref|XP_008456361.1| (PREDICTED: uncharacterized protein LOC103496322 isoform X2 [Cucumis melo]) HSP 1 Score: 626.3 bits (1614), Expect = 3.1e-176 Identity = 304/344 (88.37%), Postives = 325/344 (94.48%), Query Frame = 1
BLAST of CmoCh02G000440 vs. NCBI nr
Match: gi|659112893|ref|XP_008456356.1| (PREDICTED: uncharacterized protein LOC103496322 isoform X1 [Cucumis melo]) HSP 1 Score: 626.3 bits (1614), Expect = 3.1e-176 Identity = 304/344 (88.37%), Postives = 325/344 (94.48%), Query Frame = 1
BLAST of CmoCh02G000440 vs. NCBI nr
Match: gi|659112907|ref|XP_008456364.1| (PREDICTED: uncharacterized protein LOC103496322 isoform X3 [Cucumis melo]) HSP 1 Score: 618.2 bits (1593), Expect = 8.5e-174 Identity = 300/340 (88.24%), Postives = 321/340 (94.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |