CmoCh01G016010 (gene) Cucurbita moschata (Rifu)

NameCmoCh01G016010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr01 : 12262234 .. 12263054 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACTCCCTACTTCTTCCTCTCTGAAACCTGCGGTCCAAATTGCCTCAAAATCTGCTCGCCATCAATTTTTCCGACGAATCTCGACCATGAATTCGAGATCGAAGCTAGATTCTAGGTCGTCGTCGTCGTCGTCGTCGACATGTCGAGTTCCGGGCTAGAATCGGAGGAGATGGACCGGATTGCGGAACAATTGTTCCGGCGGTATTCGTCTCCTTCGTCTTCGGGTGTTAAAAGAGGAAAAGGAGTCGCCCTTGTTTGTTCAGAAATGACCTCCGTGTGCTGGACAATGAGGCTCTGTATAAGGCCTGGGTTTCGCCCGAGGCTGTGTTGCCGGTGTATTCCGCTGATCCAAGATCTTCTGGTTCTACCTGCTACTTCGGATTTCCTAGAACTGGAGGTTTATTTCTGAATTTATTCTTTACTTTTGTTACTGATAAAGATGATCGTGTAATTTGTTTGGAATTTATGCGTCTCTTGTTGAGCTCTGAACTGGTGGATTTTTTGTTCTATTTCTTGTTGTTGCCGATCATGAAGCGATTCTGTTCCATGTAATGCTCATAGCTCATTACTACTACTTGAGCGTAATGGAGCTCTTGCTCATCGGGTTTAGGTCACGTCTTCTCTTCTTGTAGTCCAAATTATTGAGGCGATTTTTGAAAAAATTCATGGCTATGTAGCAGTAAGTTATCAATTATGCTGGAAATGTCTTAAGCTATTTGTTGAATCGCTGTTTAAAATTATGATTTCAGCGTTTTGGAACTTATGCTTAGAGCAAGTGTTTCAACGATTATATAATTTTCTCCCTTTCTTGCAGCAATGA

mRNA sequence

ACACTCCCTACTTCTTCCTCTCTGAAACCTGCGGTCCAAATTGCCTCAAAATCTGCTCGCCATCAATTTTTCCGACGAATCTCGACCATGAATTCGAGATCGAAGCTAGATTCTAGGTCGTCGTCGTCGTCGTCGTCGACATGTCGAGTTCCGGGCTAGAATCGGAGGAGATGGACCGGATTGCGGAACAATTGTTCCGGCGGTATTCGTCTCCTTCGTCTTCGGGTGTTAAAAGAGGAAAAGGAGTCGCCCTTGTTTGTTCAGAAATGACCTCCGTGTGCTGGACAATGAGGCTCTGTATAAGGCCTGGGTTTCGCCCGAGGCTGTGTTGCCGGTGTATTCCGCTGATCCAAGATCTTCTGGTTCTACCTGCTACTTCGGATTTCCTAGAACTGGAGCAATGA

Coding sequence (CDS)

ATGTCGAGTTCCGGGCTAGAATCGGAGGAGATGGACCGGATTGCGGAACAATTGTTCCGGCGGTATTCGTCTCCTTCGTCTTCGGGTGTTAAAAGAGGAAAAGGAGTCGCCCTTGTTTGTTCAGAAATGACCTCCGTGTGCTGGACAATGAGGCTCTGTATAAGGCCTGGGTTTCGCCCGAGGCTGTGTTGCCGGTGTATTCCGCTGATCCAAGATCTTCTGGTTCTACCTGCTACTTCGGATTTCCTAGAACTGGAGCAATGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003913 DNA photolyase activity
molecular_function GO:0003904 deoxyribodipyrimidine photo-lyase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G016010.1CmoCh01G016010.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G016010Cp4.1LG06g04670Cucurbita pepo (Zucchini)cmocpeB460
CmoCh01G016010Cla97C05G098610Watermelon (97103) v2cmowmbB457
CmoCh01G016010Bhi09G001987Wax gourdcmowgoB0623
CmoCh01G016010Carg21160Silver-seed gourdcarcmoB0749
CmoCh01G016010Carg02925Silver-seed gourdcarcmoB0870
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh01G016010CmoCh09G005060Cucurbita moschata (Rifu)cmocmoB012
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G016010Cucumber (Gy14) v2cgybcmoB200
CmoCh01G016010Cucumber (Gy14) v2cgybcmoB329
CmoCh01G016010Cucumber (Gy14) v2cgybcmoB343
CmoCh01G016010Melon (DHL92) v3.6.1cmomedB459
CmoCh01G016010Melon (DHL92) v3.6.1cmomedB471
CmoCh01G016010Melon (DHL92) v3.6.1cmomedB475
CmoCh01G016010Silver-seed gourdcarcmoB0085
CmoCh01G016010Silver-seed gourdcarcmoB0876
CmoCh01G016010Silver-seed gourdcarcmoB1315
CmoCh01G016010Cucumber (Chinese Long) v3cmocucB0536
CmoCh01G016010Cucumber (Chinese Long) v3cmocucB0519
CmoCh01G016010Cucumber (Chinese Long) v3cmocucB0522
CmoCh01G016010Watermelon (97103) v2cmowmbB467
CmoCh01G016010Watermelon (97103) v2cmowmbB487
CmoCh01G016010Wax gourdcmowgoB0565
CmoCh01G016010Wax gourdcmowgoB0600
CmoCh01G016010Cucurbita moschata (Rifu)cmocmoB026
CmoCh01G016010Cucurbita moschata (Rifu)cmocmoB142
CmoCh01G016010Cucurbita moschata (Rifu)cmocmoB373
CmoCh01G016010Cucumber (Gy14) v1cgycmoB0458
CmoCh01G016010Cucumber (Gy14) v1cgycmoB0865
CmoCh01G016010Cucumber (Gy14) v1cgycmoB0862
CmoCh01G016010Cucurbita maxima (Rimu)cmacmoB040
CmoCh01G016010Cucurbita maxima (Rimu)cmacmoB055
CmoCh01G016010Cucurbita maxima (Rimu)cmacmoB185
CmoCh01G016010Cucurbita maxima (Rimu)cmacmoB468
CmoCh01G016010Cucurbita maxima (Rimu)cmacmoB782
CmoCh01G016010Wild cucumber (PI 183967)cmocpiB434
CmoCh01G016010Wild cucumber (PI 183967)cmocpiB436
CmoCh01G016010Wild cucumber (PI 183967)cmocpiB451
CmoCh01G016010Cucumber (Chinese Long) v2cmocuB430
CmoCh01G016010Cucumber (Chinese Long) v2cmocuB432
CmoCh01G016010Cucumber (Chinese Long) v2cmocuB448
CmoCh01G016010Melon (DHL92) v3.5.1cmomeB402
CmoCh01G016010Melon (DHL92) v3.5.1cmomeB413
CmoCh01G016010Melon (DHL92) v3.5.1cmomeB415
CmoCh01G016010Watermelon (Charleston Gray)cmowcgB409
CmoCh01G016010Watermelon (Charleston Gray)cmowcgB418
CmoCh01G016010Watermelon (Charleston Gray)cmowcgB436
CmoCh01G016010Watermelon (97103) v1cmowmB430
CmoCh01G016010Watermelon (97103) v1cmowmB417
CmoCh01G016010Watermelon (97103) v1cmowmB440
CmoCh01G016010Cucurbita pepo (Zucchini)cmocpeB423
CmoCh01G016010Cucurbita pepo (Zucchini)cmocpeB448
CmoCh01G016010Cucurbita pepo (Zucchini)cmocpeB472
CmoCh01G016010Cucurbita pepo (Zucchini)cmocpeB475
CmoCh01G016010Bottle gourd (USVL1VR-Ls)cmolsiB413
CmoCh01G016010Bottle gourd (USVL1VR-Ls)cmolsiB426
CmoCh01G016010Bottle gourd (USVL1VR-Ls)cmolsiB443