CmaCh20G001690.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTTCACATACCTAACCAAAAAACCATACTCAAATAACTAACTCTCTCTCTCTCTCTTGTTTACACGGCCATGGCAAAGATGTCGGATCCTCTTGTGGTCGGAAGAGTGGTCGGAGACATCATCGACGCCTTCTCCCCAACGGTGAAGATGACTGTCACTTACCATTCAAACAAGAAGGTGTCCAATGGGCATGAGCTGCTTCCAAATTTTATAACCCTAAAACCTAAGGTTGAGGTTCTTGGAGGCGACCTTAGATCCTTCTTCACATTGGTATGATCATATTCAACGATACCCATCTTCTCATTTCGTTTTATATATTTATAATTAAGTCCACCGCGGGCAGATATTGTCTTCTTAAAAATTTAAAACGCATTTTCCCAATGATTTTCAACTAACTTTGCAGGTGATGACCGATCCAGATGTTCCGGGTCCGAGTGATCCTTACTTGAGAGAGCATCTCCATTGGTATCATCTCCTTTCATTAAGCTCCCATGATTGAGATTACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGTTTTTATTAAGGATATGATTTTGATTTATTTCAGGATAGTAACAGACATCCCAGGAACGACAGATTCCAGTTTTGGTAAGTCTTATGGTCGTAATGGATTTGTTTCATGTATTTGTGGTATAATTAATTACATGATATTGTGGTTAAAACAGGAAAAGAAGTAGTGAAATATGAAGTTCCAAGTCCAAACGTAGGGATCCATAGATTCGTGTTCCTTCTATTCAAGCAAACACGAAGGCAGACAGTGAAGCCACCAGCTGCTTCAGCTTCAAGAGATGGGTTCAATGCAAGAAGATTTGCAGAAGAGAATGGTCTTGGCCTTCCTGTGGCTGCAGTCTATTTCAATGCTCAAAGGGCTACGGCCGCCAGAAGAAGATAAATAAATAAATAAATAAATAACCCAAAATAAGATATTTATTATATTGAATTTGCATGCAGTGTTTAGCTGTCCTTGTTTTATGTTTGGTTTTATGTTTGGTTTGTTAACGTTTAGATTGGTGGTGAAATTTGCTGAATGAATCACGTACATGGAAAGAACACAAACCAAAATTGTATTCGATATTTTTCTTTTTAAGTATTCGAAAGTTTTCCGTC CACTTCACATACCTAACCAAAAAACCATACTCAAATAACTAACTCTCTCTCTCTCTCTTGTTTACACGGCCATGGCAAAGATGTCGGATCCTCTTGTGGTCGGAAGAGTGGTCGGAGACATCATCGACGCCTTCTCCCCAACGGTGAAGATGACTGTCACTTACCATTCAAACAAGAAGGTGTCCAATGGGCATGAGCTGCTTCCAAATTTTATAACCCTAAAACCTAAGGTTGAGGTTCTTGGAGGCGACCTTAGATCCTTCTTCACATTGGTGATGACCGATCCAGATGTTCCGGGTCCGAGTGATCCTTACTTGAGAGAGCATCTCCATTGGATAGTAACAGACATCCCAGGAACGACAGATTCCAGTTTTGGAAAAGAAGTAGTGAAATATGAAGTTCCAAGTCCAAACGTAGGGATCCATAGATTCGTGTTCCTTCTATTCAAGCAAACACGAAGGCAGACAGTGAAGCCACCAGCTGCTTCAGCTTCAAGAGATGGGTTCAATGCAAGAAGATTTGCAGAAGAGAATGGTCTTGGCCTTCCTGTGGCTGCAGTCTATTTCAATGCTCAAAGGGCTACGGCCGCCAGAAGAAGATAAATAAATAAATAAATAAATAACCCAAAATAAGATATTTATTATATTGAATTTGCATGCAGTGTTTAGCTGTCCTTGTTTTATGTTTGGTTTTATGTTTGGTTTGTTAACGTTTAGATTGGTGGTGAAATTTGCTGAATGAATCACGTACATGGAAAGAACACAAACCAAAATTGTATTCGATATTTTTCTTTTTAAGTATTCGAAAGTTTTCCGTC ATGGCAAAGATGTCGGATCCTCTTGTGGTCGGAAGAGTGGTCGGAGACATCATCGACGCCTTCTCCCCAACGGTGAAGATGACTGTCACTTACCATTCAAACAAGAAGGTGTCCAATGGGCATGAGCTGCTTCCAAATTTTATAACCCTAAAACCTAAGGTTGAGGTTCTTGGAGGCGACCTTAGATCCTTCTTCACATTGGTGATGACCGATCCAGATGTTCCGGGTCCGAGTGATCCTTACTTGAGAGAGCATCTCCATTGGATAGTAACAGACATCCCAGGAACGACAGATTCCAGTTTTGGAAAAGAAGTAGTGAAATATGAAGTTCCAAGTCCAAACGTAGGGATCCATAGATTCGTGTTCCTTCTATTCAAGCAAACACGAAGGCAGACAGTGAAGCCACCAGCTGCTTCAGCTTCAAGAGATGGGTTCAATGCAAGAAGATTTGCAGAAGAGAATGGTCTTGGCCTTCCTGTGGCTGCAGTCTATTTCAATGCTCAAAGGGCTACGGCCGCCAGAAGAAGATAA MAKMSDPLVVGRVVGDIIDAFSPTVKMTVTYHSNKKVSNGHELLPNFITLKPKVEVLGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVKYEVPSPNVGIHRFVFLLFKQTRRQTVKPPAASASRDGFNARRFAEENGLGLPVAAVYFNAQRATAARRR
BLAST of CmaCh20G001690.1 vs. Swiss-Prot
Match: CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 1.6e-72 Identity = 129/175 (73.71%), Postives = 151/175 (86.29%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. Swiss-Prot
Match: CET4_TOBAC (CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 2.4e-71 Identity = 126/175 (72.00%), Postives = 151/175 (86.29%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. Swiss-Prot
Match: SELFP_SOLLC (Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 5.8e-70 Identity = 123/175 (70.29%), Postives = 149/175 (85.14%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. Swiss-Prot
Match: CEN_ARATH (Protein CENTRORADIALIS-like OS=Arabidopsis thaliana GN=CEN PE=2 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.7e-69 Identity = 126/172 (73.26%), Postives = 145/172 (84.30%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. Swiss-Prot
Match: CEN_ANTMA (Protein CENTRORADIALIS OS=Antirrhinum majus GN=CEN PE=1 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 3.8e-69 Identity = 125/175 (71.43%), Postives = 143/175 (81.71%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TrEMBL
Match: A0A0A0KB52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G152360 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 5.7e-80 Identity = 149/177 (84.18%), Postives = 161/177 (90.96%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TrEMBL
Match: B9ZYL5_CUCSA (TFL1-like protein OS=Cucumis sativus GN=CsTFL1d PE=2 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 1.8e-78 Identity = 147/177 (83.05%), Postives = 159/177 (89.83%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TrEMBL
Match: M5WK70_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012343mg PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.5e-77 Identity = 143/176 (81.25%), Postives = 158/176 (89.77%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TrEMBL
Match: Q8LLM8_VITVI (Terminal flower-like protein 1 OS=Vitis vinifera GN=TFL1 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 3.2e-75 Identity = 134/176 (76.14%), Postives = 158/176 (89.77%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TrEMBL
Match: D6PMX3_VITRI (Terminal flower 1 OS=Vitis riparia GN=TFL1 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 4.2e-75 Identity = 134/176 (76.14%), Postives = 157/176 (89.20%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TAIR10
Match: AT2G27550.1 (AT2G27550.1 centroradialis) HSP 1 Score: 263.5 bits (672), Expect = 9.6e-71 Identity = 126/172 (73.26%), Postives = 145/172 (84.30%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TAIR10
Match: AT5G03840.1 (AT5G03840.1 PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 245.7 bits (626), Expect = 2.1e-65 Identity = 115/174 (66.09%), Postives = 147/174 (84.48%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TAIR10
Match: AT5G62040.1 (AT5G62040.1 PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 229.2 bits (583), Expect = 2.0e-60 Identity = 108/176 (61.36%), Postives = 137/176 (77.84%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TAIR10
Match: AT1G65480.1 (AT1G65480.1 PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 194.5 bits (493), Expect = 5.5e-50 Identity = 95/171 (55.56%), Postives = 124/171 (72.51%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. TAIR10
Match: AT4G20370.1 (AT4G20370.1 PEBP (phosphatidylethanolamine-binding protein) family protein) HSP 1 Score: 185.3 bits (469), Expect = 3.3e-47 Identity = 94/164 (57.32%), Postives = 116/164 (70.73%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. NCBI nr
Match: gi|449463070|ref|XP_004149257.1| (PREDICTED: CEN-like protein 2 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 8.1e-80 Identity = 149/177 (84.18%), Postives = 161/177 (90.96%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. NCBI nr
Match: gi|700191746|gb|KGN46950.1| (hypothetical protein Csa_6G152360 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 8.1e-80 Identity = 149/177 (84.18%), Postives = 161/177 (90.96%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. NCBI nr
Match: gi|659117400|ref|XP_008458582.1| (PREDICTED: CEN-like protein 2 [Cucumis melo]) HSP 1 Score: 301.2 bits (770), Expect = 1.2e-78 Identity = 146/177 (82.49%), Postives = 160/177 (90.40%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. NCBI nr
Match: gi|821595385|ref|NP_001295832.1| (CEN-like protein 2 [Cucumis sativus]) HSP 1 Score: 300.1 bits (767), Expect = 2.6e-78 Identity = 147/177 (83.05%), Postives = 159/177 (89.83%), Query Frame = 1
BLAST of CmaCh20G001690.1 vs. NCBI nr
Match: gi|595830116|ref|XP_007206006.1| (hypothetical protein PRUPE_ppa012343mg [Prunus persica]) HSP 1 Score: 297.0 bits (759), Expect = 2.2e-77 Identity = 143/176 (81.25%), Postives = 158/176 (89.77%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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