CmaCh17G013130.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTCATCGCCAATAATTGAATTCCATCCGTTCCTCGCTTTCTCCTTCTCCGTCTTCTTCTCCTTCTTCTTCTTCTTCCTCTCTGTGTTACTGCTGTCATTCTTATTCTCTCTTCACTCCCTCAAAACTCCATTGCTGATCTCTCTCTAAAACCCTACTTCATCTCCCTCACCTTTCTCCTTCTTCCTCGATTATACACTATTCGCCATGCTTCCCTCTTCCTCCATGCTCTTCCTCTGGTTCTCCTTCCTCTACTTCACCTCTTCAATGGCGGCTCCTTATGCTCTCAGCGACTTCACTGCTTCGAAGTCGATTTACGATGTGCTATTGGCTCATGGCCTTCCCAAGGGGCTACTTCCGAAGGGCGTCAGGGATTACCAATTCGATCAGGACACTGGCCGCTTTCTTGTGTTTTTGGATCAGGAGTGTAATGCGATGTTCGAGAATCAACTGCATTACGAGACTAATGTTTCCGGCACTTTGAGTTATGGCCAGATCGGCGCCTTGTCTGGGATTTCCGCCAAGGATCTCTTCTTGTGGTTCCCTGTTAAGGGGATTCGCGTCGATGTTCCTAGCTCCGGTGTTATTTATTTCGACGTCGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCGCCTGAATGTGTCCCTAATTCTAAGGTTTTGATCTAATTTTTTTAAAATTTTTCATACTCTATTAGTTTCATTAGTTTGTGTTTCTCTATCAATATTGGTGAAGTTGTCTGAGTTCAATTCAGTTCGATTGTGACTGTTTTTCCCCATCTGCAGACTCAACACAGAAAGATTGGGAACGGATTCGTTCAGCCAGTTCAAGTGAAAGTGGCTTGATATTTCCATTGAAGCAATGGGAAGAAAAAGAAAAAGGCTCAAAGGAATCTCTTATTGGGTGGTAGTTGTGAATCTTCATTGTATATGTCCTCAAAGCATATATATTAGCATCTGCTATATGGTTCTTTACACAGTGTGCACTTGAACTTTCTCATCACCATCATCATCATCATTCAGAGAAGAGTCAGAGTGTGAGAATTTGTTGAGCAGCTTCTGGTTTATGTGAGGAAGGAAGTGAGAAGGTGAAGAAGAAAATTTGGTTCAAAGATTTTTGTTTTTTTGGCTGTAGAAAGGCAGGTGGAGTTCAGGTGAAAAATCTACACATTTCTATTCAATAATCTTCAGAAATTTTGGTGTATTGTGAATATTATCATTATCATTATTACTATAATAATTATTGTTGTTATTATTACAGTGGCTACAATTATTTTGTTTTTTTCTTTGTCTTGAACCCAAATTCTCTGCAATAAACGTGTCAAGAATAGTGTTCTTCTTGTTTTATGCCTACGTCTTGTTTGTCTCTCAGTTCTTTAAGCTGACACTATCGTTTCAATTGGCACAGAACAGTGGGAATTGTCAATCTTGT CTCTCTCTCTCTCTCTCTCTCATCGCCAATAATTGAATTCCATCCGTTCCTCGCTTTCTCCTTCTCCGTCTTCTTCTCCTTCTTCTTCTTCTTCCTCTCTGTGTTACTGCTGTCATTCTTATTCTCTCTTCACTCCCTCAAAACTCCATTGCTGATCTCTCTCTAAAACCCTACTTCATCTCCCTCACCTTTCTCCTTCTTCCTCGATTATACACTATTCGCCATGCTTCCCTCTTCCTCCATGCTCTTCCTCTGGTTCTCCTTCCTCTACTTCACCTCTTCAATGGCGGCTCCTTATGCTCTCAGCGACTTCACTGCTTCGAAGTCGATTTACGATGTGCTATTGGCTCATGGCCTTCCCAAGGGGCTACTTCCGAAGGGCGTCAGGGATTACCAATTCGATCAGGACACTGGCCGCTTTCTTGTGTTTTTGGATCAGGAGTGTAATGCGATGTTCGAGAATCAACTGCATTACGAGACTAATGTTTCCGGCACTTTGAGTTATGGCCAGATCGGCGCCTTGTCTGGGATTTCCGCCAAGGATCTCTTCTTGTGGTTCCCTGTTAAGGGGATTCGCGTCGATGTTCCTAGCTCCGGTGTTATTTATTTCGACGTCGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCGCCTGAATGTGTCCCTAATTCTAAGACTCAACACAGAAAGATTGGGAACGGATTCGTTCAGCCAGTTCAAGTGAAAGTGGCTTGATATTTCCATTGAAGCAATGGGAAGAAAAAGAAAAAGGCTCAAAGGAATCTCTTATTGGGTGGTAGTTGTGAATCTTCATTGTATATGTCCTCAAAGCATATATATTAGCATCTGCTATATGGTTCTTTACACAGTGTGCACTTGAACTTTCTCATCACCATCATCATCATCATTCAGAGAAGAGTCAGAGTGTGAGAATTTGTTGAGCAGCTTCTGGTTTATGTGAGGAAGGAAGTGAGAAGGTGAAGAAGAAAATTTGGTTCAAAGATTTTTGTTTTTTTGGCTGTAGAAAGGCAGGTGGAGTTCAGGTGAAAAATCTACACATTTCTATTCAATAATCTTCAGAAATTTTGGTGTATTGTGAATATTATCATTATCATTATTACTATAATAATTATTGTTGTTATTATTACAGTGGCTACAATTATTTTGTTTTTTTCTTTGTCTTGAACCCAAATTCTCTGCAATAAACGTGTCAAGAATAGTGTTCTTCTTGTTTTATGCCTACGTCTTGTTTGTCTCTCAGTTCTTTAAGCTGACACTATCGTTTCAATTGGCACAGAACAGTGGGAATTGTCAATCTTGT ATGCTTCCCTCTTCCTCCATGCTCTTCCTCTGGTTCTCCTTCCTCTACTTCACCTCTTCAATGGCGGCTCCTTATGCTCTCAGCGACTTCACTGCTTCGAAGTCGATTTACGATGTGCTATTGGCTCATGGCCTTCCCAAGGGGCTACTTCCGAAGGGCGTCAGGGATTACCAATTCGATCAGGACACTGGCCGCTTTCTTGTGTTTTTGGATCAGGAGTGTAATGCGATGTTCGAGAATCAACTGCATTACGAGACTAATGTTTCCGGCACTTTGAGTTATGGCCAGATCGGCGCCTTGTCTGGGATTTCCGCCAAGGATCTCTTCTTGTGGTTCCCTGTTAAGGGGATTCGCGTCGATGTTCCTAGCTCCGGTGTTATTTATTTCGACGTCGGTGTTGTTTTCAAGCAATTCTCTCAGTCCCTCTTCGAAACCCCGCCTGAATGTGTCCCTAATTCTAAGACTCAACACAGAAAGATTGGGAACGGATTCGTTCAGCCAGTTCAAGTGAAAGTGGCTTGA MLPSSSMLFLWFSFLYFTSSMAAPYALSDFTASKSIYDVLLAHGLPKGLLPKGVRDYQFDQDTGRFLVFLDQECNAMFENQLHYETNVSGTLSYGQIGALSGISAKDLFLWFPVKGIRVDVPSSGVIYFDVGVVFKQFSQSLFETPPECVPNSKTQHRKIGNGFVQPVQVKVA
BLAST of CmaCh17G013130.1 vs. TrEMBL
Match: A0A0A0K6Z0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372350 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.7e-74 Identity = 138/164 (84.15%), Postives = 151/164 (92.07%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. TrEMBL
Match: M5VP51_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011328mg PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.8e-46 Identity = 95/131 (72.52%), Postives = 108/131 (82.44%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. TrEMBL
Match: A5BBX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016695 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 4.0e-46 Identity = 95/130 (73.08%), Postives = 107/130 (82.31%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. TrEMBL
Match: A0A067LDG7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15108 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.2e-45 Identity = 92/130 (70.77%), Postives = 106/130 (81.54%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. TrEMBL
Match: W9RDZ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015854 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.5e-45 Identity = 88/119 (73.95%), Postives = 105/119 (88.24%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538) HSP 1 Score: 174.1 bits (440), Expect = 7.5e-44 Identity = 81/140 (57.86%), Postives = 110/140 (78.57%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538) HSP 1 Score: 157.1 bits (396), Expect = 9.5e-39 Identity = 77/131 (58.78%), Postives = 102/131 (77.86%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. TAIR10
Match: AT5G16380.1 (AT5G16380.1 Protein of unknown function, DUF538) HSP 1 Score: 138.3 bits (347), Expect = 4.6e-33 Identity = 72/140 (51.43%), Postives = 91/140 (65.00%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. TAIR10
Match: AT1G61667.1 (AT1G61667.1 Protein of unknown function, DUF538) HSP 1 Score: 124.0 bits (310), Expect = 8.9e-29 Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538) HSP 1 Score: 123.2 bits (308), Expect = 1.5e-28 Identity = 67/147 (45.58%), Postives = 90/147 (61.22%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. NCBI nr
Match: gi|659092797|ref|XP_008447224.1| (PREDICTED: uncharacterized protein LOC103489718 [Cucumis melo]) HSP 1 Score: 292.4 bits (747), Expect = 5.4e-76 Identity = 143/164 (87.20%), Postives = 154/164 (93.90%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. NCBI nr
Match: gi|449465296|ref|XP_004150364.1| (PREDICTED: uncharacterized protein At5g01610-like [Cucumis sativus]) HSP 1 Score: 286.2 bits (731), Expect = 3.8e-74 Identity = 138/164 (84.15%), Postives = 151/164 (92.07%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. NCBI nr
Match: gi|595801468|ref|XP_007201828.1| (hypothetical protein PRUPE_ppa011328mg [Prunus persica]) HSP 1 Score: 193.7 bits (491), Expect = 2.6e-46 Identity = 95/131 (72.52%), Postives = 108/131 (82.44%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. NCBI nr
Match: gi|225470256|ref|XP_002264070.1| (PREDICTED: uncharacterized protein LOC100241410 [Vitis vinifera]) HSP 1 Score: 192.6 bits (488), Expect = 5.8e-46 Identity = 95/130 (73.08%), Postives = 107/130 (82.31%), Query Frame = 1
BLAST of CmaCh17G013130.1 vs. NCBI nr
Match: gi|147798671|emb|CAN74376.1| (hypothetical protein VITISV_016695 [Vitis vinifera]) HSP 1 Score: 192.6 bits (488), Expect = 5.8e-46 Identity = 95/130 (73.08%), Postives = 107/130 (82.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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