CmaCh17G011380.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh17G011380.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRNA binding protein, putative
LocationCma_Chr17 : 7920872 .. 7925516 (+)
Sequence length1972
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATTGAAGAGATCTAATTTTAGCATCAGAAGCACTCATTTTTTTCTCTGCGAAGACTTTCAGGAGGAAAATCCAATATCAGAGAGAGAAGCGACGGCGAAAACTAGAGAGAGATAGACACAGAGACAGAGAGAGAGAGAGAGAGAGGTTTTCCAGAGAGAGAAAGCTTGAAACCGGCATTAATGGCGGAGGGGAGTGGAGGAGGAGAGAGAAAGGGGAGTAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTGCCGAAGCATATTACCGAAGCTCAACTTCTCGCAATGTTCCAAGAGCTTGCACTTGTTGACGAGGTCAACATCATCAGAGACAAAACCACTCGCGCCTCTAGAGGTTTTTCTCTTTGATTTCAACTTCAGCGTCTCTCGTTCTTATTTTTCTTAGTTTACATTTACACTCCCATTCTCTCTGTTTTGGTTGTGTGTTGTTGTTTGTTTGTGGTTCGATTGATTTTGAGAGGTCTTTAACCGATAAACATTGTGAATTGATGTGTTGATCCCTAATTTTGTTGTGATTTGGGCTTGTTTTGGTTACTACATTTTCAGGTTGCTGTTTTGTGATATGTCCTTCGAGGCAGGAGGCGGATAAGGCGATCAATGCTTGCCATAACAAGAAAACTTTACCTGGGGTTAGTGGAATCTGGACGTTTTTATGATTTTGTATAATTTATGTCTCTTTCTCTCCCAATGTTTTGTAATTGTATCTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTTTCTTGTCGATAATGCTAATCAATGCAACTGATCGATTCGATGACTTGGCCTTGTACGTAATCGCTGTTATAGGTAACCTAGAAGTTCTAAAAGTCTTGGATTTTCTGTAGAAGCTGCTTTCTAGTTTTAGATACAGCACATTGTGATGTATCTTATATTTGGAGTTAAAAATGAACTAGAAGCGCTCTACATTTCTTGTGGAGCCAACTTGAGCAGACGCTTTAAGCTTTCACGGCCCTTTTTCTTAAGAAAAAAAGTTGTTGAATCTTTTCAATTATATATTATATAGTTTGACTCTCAAAGGTGATACCCTTGCGCCTGTACATGCTCTGACGATGAACAATAGAGAAAAGAGTAAAAATAAACAAAACCTTTATAGGAAGCTGGCTCTTACAAAATTAAGTTAACTATGCACGTCATTGGAGTGGGATCAACTTTTGACCCCTAAATTATGGCTTTTTGTCTTAAATTTTGGAGCAATGATTCTCTGATGTTATGATTCTTCTTGTAATTATCCTTTTATGTTTCCGTTAACTCTGTAATTAAACAATGTTTATCGTCAAATTGATTAGTAATACCCCTCCTTTTCCATTCAATCAGGCTTCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGGTGTAATATCATGCCCTGCTTGAATATTTCATCTAAAAGATGGTTCCTAATATCCATCACCTACATCGCCACTTTCTTCATGAGCTTGTATTTATCTTGCTAAAAGATTAATTTTGGATATTAATGGTTGGTTTTTTCTGAAAAGAGCAGAACACAAACTCTTTATTGGAATGCTTCCAAAAAATGTATCCGAAGATGAAGTTTCTAGTCTTTTCTCTCAATATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCGCAGCAGACAAGTAAAGGTAGTTTTTGGTTTGTTTCAGCTTGATGTTAGTTGAAATTATGAAAGATCTCACACATTCAGTTGAATCTTCACCATTAGCTCCATATGTTGCTCAAGTTCAGGTTGTGCGTTCTTGAAGTATGAGACAAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAATGGAAAGCATAAAATGGAGGTAATGTAAATTAACTTGTCTACTCATTCATCTTTGAGTTAATTTTCTAGAAATGTTTAGCTTTTCAAATTTCTTTGATAGGTGGTCAATACCAAAATCATTGAAATCATAGATCCCATAATATTGTCTGAATATTTCATCTGAAAAGGATATTGCTCGCTCTTGTTATGTTGAACCCTTTTATTCATGAGAATGTTGATGTAAATTTTATTCCTTGCCTCTCAAGATCATTTCATGGATAGCATTTATGTATCGTGGTATTGTATTGCAGTAAATATTCTATTAGTTTGATAATGTTTTACTCTCAGTCCAGCTACATCTATCAATGGGAAGAAGGCAATCGGGGGTACTGATAAGGATATTTAAATTTGTGTTCAGAGCATTGCTTTGCATAAACTTGCATTAAACATGAATATTTTTGTTTCCTCTTTTTGTTTCCTCTTTTTGTTTCCCTGTTTCTTAAGACCGTATTCTTTTATTCTTCCATTGGTTTTATTTTTATTTTTAATGAATTTTGTAATGGATGAATGAAACTAATAGTCATACTTATACTAGCAGATGGTATTGTGGCCTGGCACTGGACAGAATAGCATTTATTTATTTTTTCTAAAAAAATATGTAATTCGTTGTAGCTGTAACTGGATGGAATTTTTTCGGTGAGGAATTTGTCATACAAGTCAAATTGGTTAGTTAAATTCATTATCATCAATAGTCGAGCTTTCTTGCTCGAGCCAACATCTTTTTGGGGCCGACATATTTTAGCCAACATCATTTGGTTGTTTTTTCCCCTACTCAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCTGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCTCTAATGTGCTTAATGCTGACTCTCAATGCTCTTCGCTGTTTGGAGCCGTGCCACTGGGTTATATTCCACCATATAATGGCTATGGTTATCAGGTCAGTTTTGCAAGGGGATTATTTTTGGGCTTCTTCTTTAGTATGTATGTATGCATTTGTGTGCAATGATCTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGTTTCTCTTTTATTATTATTGTAGAGGGTCTGTGCTGTCTTGTTCTTGTTCTTTTGGTTGTCATGCTTTCAATAGAACGCCATTCACATCTCTTTTAAATTAGAAGAGTTACTAATGAACGTTATAAATCAGACACCTGATCTTGATTTCCTTTTGAGTGGTTTTCATTTTCATGTTTGCAATTGAAATTTTTTATATTGAAATTGGAGGGTAGCCAATGATAGTCTCTGCATTCTCTTTGTAGGCTCCTGGAAGTTATGGGCTTATGCAGTATCATCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAATATGATACCCCAATTAAACCAAGGAAATGCAATGCGTGGGATCTCACCCGACCTTGGCCCAGGTATGGCCACTAGAAATTATGGCATGCCTCCTGCAAGTTACGTTGGCTCTGCGTATCCTGCAGTTCCATGTCTTCAGCATCCCATGGCATACCCTGGAGGAATGATGAGTCCTGGGGTTGTGAGCAGTTCACCTGGGCCATTTACTGGTGGTAACAATAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGGAGTCAGATTGAAGGTAGGTAGTTATTTCTGGTTTTGTCCGACTTTAATTTACTGTTTTGTTGAGTTTCTGGGAATTATACTTCTCTCTTTTACTCTAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCTCAAGAATTTGGTGATCTGGAGCTTGCTAATTCTTTTCGAGCATTTGGTCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGTGAGCATGGTTGATTCCTTTAATGGGTAGCTGACATTTTTTTCTTACTACTTTACACCAACTATGTGCAAAAACAAATGTTGAAGATGAGTATTTTGATCATTCCCTACTATATTTTGGTAACTGTAGCCGTTTAACCTTGCTCCATCTACAGGTTTTGTTAGTTATGATTCAGTCGAGGCTGCTCAATCTGCCATAAGTAGGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAAAGCAAACCATATTGATTCTTAGTTATGTGATCCAACGCAACGCAGCCAAGCTGCTACCACTTGCTTACATCGGGGGGCCCAAAAGCACACGACAGTCATTCCATTATCAGATCTTTAGGGTGGATTGGATGGTCTGGTTAAAATTCATTACTCCATTCTGCCTGTGATTGCATCATCAGATGAAATCAAAGATACTTATAACATCGTTCGGCCATGCTGATGCGATTTGTAATTTATGTATCTTGGAAGATTAACATTCTTTAATTGATTCTTCCGGGACATCTGTTGACTGTAAAATACAATGTAATTACAAATGATCTCTTGATTCTTTTAGGTTATTGATTTAGTATTGCCTAATTTGATGCTTTTGCCTTCTGGTTTCTTGTATTCTTTGAAAGAAACTCATATCTTGCTTGCAATACTGTGGGTTGGGCATTCAATCCTAACTTCTTCAAGAATATCTTGTTTTAGATTATCTATTACAAAC

mRNA sequence

TTTATTGAAGAGATCTAATTTTAGCATCAGAAGCACTCATTTTTTTCTCTGCGAAGACTTTCAGGAGGAAAATCCAATATCAGAGAGAGAAGCGACGGCGAAAACTAGAGAGAGATAGACACAGAGACAGAGAGAGAGAGAGAGAGAGGTTTTCCAGAGAGAGAAAGCTTGAAACCGGCATTAATGGCGGAGGGGAGTGGAGGAGGAGAGAGAAAGGGGAGTAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTGCCGAAGCATATTACCGAAGCTCAACTTCTCGCAATGTTCCAAGAGCTTGCACTTGTTGACGAGGTCAACATCATCAGAGACAAAACCACTCGCGCCTCTAGAGGTTGCTGTTTTGTGATATGTCCTTCGAGGCAGGAGGCGGATAAGGCGATCAATGCTTGCCATAACAAGAAAACTTTACCTGGGGCTTCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAACTCTTTATTGGAATGCTTCCAAAAAATGTATCCGAAGATGAAGTTTCTAGTCTTTTCTCTCAATATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCGCAGCAGACAAGTAAAGGTTGTGCGTTCTTGAAGTATGAGACAAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAATGGAAAGCATAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCTGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCTCTAATGTGCTTAATGCTGACTCTCAATGCTCTTCGCTGTTTGGAGCCGTGCCACTGGGTTATATTCCACCATATAATGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAGTATCATCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAATATGATACCCCAATTAAACCAAGGAAATGCAATGCGTGGGATCTCACCCGACCTTGGCCCAGGTATGGCCACTAGAAATTATGGCATGCCTCCTGCAAGTTACGTTGGCTCTGCGTATCCTGCAGTTCCATGTCTTCAGCATCCCATGGCATACCCTGGAGGAATGATGAGTCCTGGGGTTGTGAGCAGTTCACCTGGGCCATTTACTGGTGGTAACAATAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGGAGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCTCAAGAATTTGGTGATCTGGAGCTTGCTAATTCTTTTCGAGCATTTGGTCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGTTTTGTTAGTTATGATTCAGTCGAGGCTGCTCAATCTGCCATAAGTAGGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAAAGCAAACCATATTGATTCTTAGTTATGTGATCCAACGCAACGCAGCCAAGCTGCTACCACTTGCTTACATCGGGGGGCCCAAAAGCACACGACAGTCATTCCATTATCAGATCTTTAGGGTGGATTGGATGGTCTGGTTAAAATTCATTACTCCATTCTGCCTGTGATTGCATCATCAGATGAAATCAAAGATACTTATAACATCGTTCGGCCATGCTGATGCGATTTGTAATTTATGTATCTTGGAAGATTAACATTCTTTAATTGATTCTTCCGGGACATCTGTTGACTGTAAAATACAATGTAATTACAAATGATCTCTTGATTCTTTTAGGTTATTGATTTAGTATTGCCTAATTTGATGCTTTTGCCTTCTGGTTTCTTGTATTCTTTGAAAGAAACTCATATCTTGCTTGCAATACTGTGGGTTGGGCATTCAATCCTAACTTCTTCAAGAATATCTTGTTTTAGATTATCTATTACAAAC

Coding sequence (CDS)

ATGGCGGAGGGGAGTGGAGGAGGAGAGAGAAAGGGGAGTAGTCAGGAGGAGGAAGACAGCGTCAAACTCTTTGTTGGTCAAGTGCCGAAGCATATTACCGAAGCTCAACTTCTCGCAATGTTCCAAGAGCTTGCACTTGTTGACGAGGTCAACATCATCAGAGACAAAACCACTCGCGCCTCTAGAGGTTGCTGTTTTGTGATATGTCCTTCGAGGCAGGAGGCGGATAAGGCGATCAATGCTTGCCATAACAAGAAAACTTTACCTGGGGCTTCTAGTCCGTTGCAAGTAAAATATGCAGATGGCGAGCTGGAAAGACTAGAACACAAACTCTTTATTGGAATGCTTCCAAAAAATGTATCCGAAGATGAAGTTTCTAGTCTTTTCTCTCAATATGGAACTATAAAAGACTTGCAAATATTAAGAGGTTCGCAGCAGACAAGTAAAGGTTGTGCGTTCTTGAAGTATGAGACAAAGGATCAAGCTGTTGCAGCACTTGAGGCAATTAATGGAAAGCATAAAATGGAGGGATCCAGTGTCCCTTTGGTTGTTAAATGGGCTGACACAGAGAAGGAAAGGCAAGCTCGGAAAGCTCAGAAAGCTCAATCACAGGCCTCTAATGTGCTTAATGCTGACTCTCAATGCTCTTCGCTGTTTGGAGCCGTGCCACTGGGTTATATTCCACCATATAATGGCTATGGTTATCAGGCTCCTGGAAGTTATGGGCTTATGCAGTATCATCTACCTCCAATGCAGAATCAATCTGGTTTTCCCAATATGATACCCCAATTAAACCAAGGAAATGCAATGCGTGGGATCTCACCCGACCTTGGCCCAGGTATGGCCACTAGAAATTATGGCATGCCTCCTGCAAGTTACGTTGGCTCTGCGTATCCTGCAGTTCCATGTCTTCAGCATCCCATGGCATACCCTGGAGGAATGATGAGTCCTGGGGTTGTGAGCAGTTCACCTGGGCCATTTACTGGTGGTAACAATAACTCTCCAACGTCTAGTTTGGGTAAAGGCTCTGGGAGTCAGATTGAAGGTCCACCTGGTGCTAATCTTTTTATTTATCACATACCTCAAGAATTTGGTGATCTGGAGCTTGCTAATTCTTTTCGAGCATTTGGTCGAGTTTTGAGTGCTAAAGTATTTGTTGACAAAACATCTGGAGTTAGCAAATGTTTTGGTTTTGTTAGTTATGATTCAGTCGAGGCTGCTCAATCTGCCATAAGTAGGATGAATGGATGCCAATTAGGTGGAAAGAAATTAAAAGTCCAGCTGAAGAGAGACAACAAACAAAGCAAACCATATTGA

Protein sequence

MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYPAVPCLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY
BLAST of CmaCh17G011380.1 vs. Swiss-Prot
Match: BRN1L_ARATH (RNA-binding protein BRN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 2.8e-161
Identity = 297/433 (68.59%), Postives = 350/433 (80.83%), Query Frame = 1

Query: 9   ERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVI 68
           E      EEE+SVKLFVGQ+PKH++E+QLL +FQE A+VDEVNII+DK TRASRGCCF++
Sbjct: 6   EENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLL 65

Query: 69  CPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSSL 128
           CPSR+EADK +NACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSE EV SL
Sbjct: 66  CPSREEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSL 125

Query: 129 FSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWAD 188
           FS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGKHKMEGS+VPLVVKWAD
Sbjct: 126 FSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWAD 185

Query: 189 TEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGY-QAPGSYGLMQYH 248
           TE+ER  R+ QKAQS  + + N D    SLFGA+P+GY+PPYNGYGY Q PG+YG   Y 
Sbjct: 186 TERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YM 245

Query: 249 LPPMQNQSGFPNMIPQLNQG--NAMRGISPD-LGPGMATRNYGMPPASYVGSAYPAVPCL 308
           LPP+QNQ+ F NMI Q NQG  NA++G SPD + P +A RN+ MPP +Y+GS YPA+   
Sbjct: 246 LPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGH 305

Query: 309 QHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEF 368
             P AYP G++SP  +SSSPG  + G   S    +G  S  Q EGP GANLFIY+IP+EF
Sbjct: 306 PFPFAYPRGIVSPRPLSSSPGSISPG--MSTPLGIGLSSVVQTEGPEGANLFIYNIPREF 365

Query: 369 GDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGCQLGGKKL 428
           GD ELA +F++FG VLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI  MNG  LGGKKL
Sbjct: 366 GDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKL 425

Query: 429 KVQLKRDNKQSKP 438
           KVQLKRD+   +P
Sbjct: 426 KVQLKRDSNNGQP 433

BLAST of CmaCh17G011380.1 vs. Swiss-Prot
Match: BRN2L_ARATH (RNA-binding protein BRN2 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 1.4e-141
Identity = 268/427 (62.76%), Postives = 327/427 (76.58%), Query Frame = 1

Query: 14  SQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVICPSRQ 73
           + E E+ VKLFVGQVPKH+TE QLL +F+E ++V+EVNII++KTTRA RGCCF+ CP+R+
Sbjct: 5   TMENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTRE 64

Query: 74  EADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSSLFSQYG 133
           +ADK IN+ HNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EV SLFS+YG
Sbjct: 65  DADKVINSFHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSETEVQSLFSEYG 124

Query: 134 TIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKER 193
           TIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+H MEG++VPL+VKWADTEKER
Sbjct: 125 TIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIVKWADTEKER 184

Query: 194 QARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQN 253
           QAR+  K QS  S +   D Q  S+FGA+P+ Y+PPYNGYGY  PG+YG   Y LPP+Q 
Sbjct: 185 QARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHVPGTYG---YMLPPIQT 244

Query: 254 QSGFPNMI-PQLNQGNAMRG--ISPDLGPGMA-TRNYGMPPASYVGSAYPAVPCLQHPMA 313
           Q  F N+I P    G A++G  ++  + P +A  RN+   P +     Y     LQ+PMA
Sbjct: 245 QHAFHNVISPNQGNGRALQGTALTESVPPRLAPRRNF---PTALGNYGYHG---LQYPMA 304

Query: 314 YPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLEL 373
           +P GM+ P +  ++  P    N  S  SSL      Q EGP GANLFIY+IP+EF D EL
Sbjct: 305 FPRGMIPPRLPLTTVSPGISNNGTSIPSSL------QTEGPAGANLFIYNIPREFEDQEL 364

Query: 374 ANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLK 433
           A +F+ FG+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+AI+ MNGCQL GKKLKVQLK
Sbjct: 365 AATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLSGKKLKVQLK 413

Query: 434 RDNKQSK 437
           RDN Q +
Sbjct: 425 RDNGQQQ 413

BLAST of CmaCh17G011380.1 vs. Swiss-Prot
Match: CELF5_XENTR (CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 9.4e-69
Identity = 175/468 (37.39%), Postives = 255/468 (54.49%), Query Frame = 1

Query: 10  RKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVIC 69
           ++  S ++ D++KLFVGQ+P+++ E  L  +F++   + E+ +++D+ T   +GC F+  
Sbjct: 36  QQSDSMKDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTY 95

Query: 70  PSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSSLF 129
            +R  A KA  A H +KTLPG + P+QVK AD E    + KLF+GML K  SE+EV+S+F
Sbjct: 96  CARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGDRKLFVGMLSKQQSEEEVTSMF 155

Query: 130 SQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADT 189
             +G+I++  +LRG   +SKGCAF+K+ +  +A AA++A++G   M G+S  LVVK+ADT
Sbjct: 156 QAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQALHGSQTMPGASSSLVVKFADT 215

Query: 190 EKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLP 249
           +KER  R+ Q+   Q             +F       I PY+ Y      +  LMQ    
Sbjct: 216 DKERTLRRMQQMVGQL-----------GIFTPSLALPISPYSAY------AQALMQQQTT 275

Query: 250 PMQNQSG--------FPNM-IPQLN----QGNAMRGISPDLG------------PGM-AT 309
            +    G        FP+  I Q+      G     I+P  G            PG+ A 
Sbjct: 276 VLSTSHGSYLSPSVAFPSCHIQQIGAVNLNGLPAAPITPASGLHSPPVIGTAAVPGLVAP 335

Query: 310 RNYGMPPASYVGSAYPAVPCLQHPMAYPGGMMSPGVVSSSPGP-FTGGNNNS---PTSSL 369
              G P      S++PA+  +      P    SP +   S  P FTG    S   PT++L
Sbjct: 336 LTNGFPGLVPFPSSHPALDTIYTNSIVPYPAQSPALTVESLHPSFTGVQQYSAIYPTAAL 395

Query: 370 GKGSGS---------QIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTS 429
              + S         Q EGP G NLFIYH+PQEFGD EL   F  FG ++S+KVF+D+ +
Sbjct: 396 TPVTHSTPQPPPILQQREGPEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRAT 455

Query: 430 GVSKCFGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY 439
             SKCFGFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Sbjct: 456 NQSKCFGFVSFDNPSSAQTAIQAMNGFQIGMKRLKVQLKRPKDTTQPY 486

BLAST of CmaCh17G011380.1 vs. Swiss-Prot
Match: CELF3_DANRE (CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 4.4e-66
Identity = 173/465 (37.20%), Postives = 249/465 (53.55%), Query Frame = 1

Query: 16  EEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVICPSRQEA 75
           +E D++KLF+GQ+P+++ E  L  +F++   + E+ +I+DK T   +GC F+   +R+ A
Sbjct: 2   KEADAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAFLTYCARESA 61

Query: 76  DKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSSLFSQYGTI 135
            KA NA H +KTLPG + P+QVK AD E  R + KLF+GML K +S+ +V  +F  +G+I
Sbjct: 62  LKAQNALHEQKTLPGMNRPIQVKPADSE-GRGDRKLFVGMLGKQLSDADVRKMFEPFGSI 121

Query: 136 KDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKERQA 195
           ++  +LRG    SKGCAF+KY++  +A AA+ A++G   + G+S  LVVK+ADTEKER  
Sbjct: 122 EECTVLRGPDGASKGCAFVKYQSNAEAQAAISALHGSRTLPGASSSLVVKFADTEKERGI 181

Query: 196 RKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQY--HLPPMQN 255
           R+ Q+  SQ    L   S  S   GA        YN Y         L+    +L P+  
Sbjct: 182 RRMQQVASQ----LGVISPMSLHLGA--------YNAYTQALVQQQALVAQSAYLSPVAT 241

Query: 256 QSGFP-NMIPQLNQGNAMR----GISPDLGPGM-----ATRNYGMPPASYVGSAYPAVPC 315
            +      +  LN  + +      I+P  G        AT    +PP   V S YP VP 
Sbjct: 242 VAAVQMQQLAALNPSSIIATPIASITPSSGTSTPPTIAATPVPALPPPIAVNS-YPPVPA 301

Query: 316 LQHPMAYPGGMMSPGV---VSSSPG------PFTGGNNNSPTSSLGKG------------ 375
             +  +    + + GV    + SP        +TG  + + T     G            
Sbjct: 302 APNGQSASEALYTNGVHPYQAQSPALDPLQQAYTGMQHYTATYPAAYGLVGQPFPHQPTL 361

Query: 376 ---------SGSQIEGPPGANLFIYHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVS 435
                       Q EGP G N+FIYH+PQEF D E+   F  FG V+SAKVFVD+ +  S
Sbjct: 362 VAQQPQQPQQLQQREGPEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQS 421

Query: 436 KCFGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQSKPY 439
           KCFGFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    ++PY
Sbjct: 422 KCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY 452

BLAST of CmaCh17G011380.1 vs. Swiss-Prot
Match: CELF5_HUMAN (CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.8e-65
Identity = 179/484 (36.98%), Postives = 248/484 (51.24%), Query Frame = 1

Query: 4   GSGGGERKGSSQE---EEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRA 63
           GS G E  G   +   + D++KLFVGQ+P+H+ E  L  +F++   + E+ +++D  T  
Sbjct: 25  GSSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGM 84

Query: 64  SRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELER-LEHKLFIGMLPKN 123
            +GC F+   +R  A KA  A H +KTLPG + P+QVK AD E     + KLF+GML K 
Sbjct: 85  HKGCAFLTYCARDSAIKAQTALHEQKTLPGMARPIQVKPADSESRGGRDRKLFVGMLNKQ 144

Query: 124 VSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSS 183
            SE++V  LF  +G I +  +LRG   +SKGCAF+K+ +  +A AA+ A++G   M G+S
Sbjct: 145 QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGAS 204

Query: 184 VPLVVKWADTEKERQARK-------------------------AQKAQSQASNVLN---- 243
             LVVK+ADT+KER  R+                         AQ    Q + VL+    
Sbjct: 205 SSLVVKFADTDKERTLRRMQQMVGQLGILTPSLTLPFSPYSAYAQALMQQQTTVLSTSGS 264

Query: 244 ------ADSQCS-SLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHLPPMQNQSGFPNMIPQ 303
                 A S C     GAV L  +P        AP S GL   H PP+   +  P ++  
Sbjct: 265 YLSPGVAFSPCHIQQIGAVSLNGLPATP----IAPAS-GL---HSPPLLGTTAVPGLVAP 324

Query: 304 LNQGNAMRGISPDLGPGMATRN--------YGMPPASYVGSAYPAVPCLQHPMA-YPGGM 363
           +  G A  G+ P  G   A           Y     +   + +PA   +Q   A YP   
Sbjct: 325 ITNGFA--GVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAA 384

Query: 364 MSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEFGDLELANSFR 423
           ++P +  S P P        P          Q EGP G NLFIYH+PQEFGD EL   F 
Sbjct: 385 ITP-IAHSVPQP-------PPLLQQ-----QQREGPEGCNLFIYHLPQEFGDTELTQMFL 444

Query: 424 AFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGCQLGGKKLKVQLKRDNKQ 439
            FG ++S+KVF+D+ +  SKCFGFVS+D+  +AQ+AI  MNG Q+G K+LKVQLKR    
Sbjct: 445 PFGNIISSKVFMDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDP 485

BLAST of CmaCh17G011380.1 vs. TrEMBL
Match: A0A0A0K5R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390170 PE=4 SV=1)

HSP 1 Score: 794.7 bits (2051), Expect = 5.9e-227
Identity = 411/441 (93.20%), Postives = 417/441 (94.56%), Query Frame = 1

Query: 1   MAEGSGGGERKGSS-QEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTR 60
           MAEGS GGERK SS QEEEDSVKLFVGQVPKH+TE QLL MFQE ALVDEVNIIRDKTTR
Sbjct: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60

Query: 61  ASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
           ASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN
Sbjct: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120

Query: 121 VSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSS 180
           VSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSS
Sbjct: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180

Query: 181 VPLVVKWADTEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPG 240
           VPLVVKWADTEKERQARKAQKAQSQA+NVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPG
Sbjct: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240

Query: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYP 300
           SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGI PDLGPGMATRNY MPPASY  SAYP
Sbjct: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP 300

Query: 301 AVPCLQHPMAYPGGMMSPGVVSSS--PGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFI 360
            VP LQHPMAYPGGMMSPGVVSSS  PGPFTGG  NSPTSS+GKGSG QIEGPPGANLFI
Sbjct: 301 GVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG-KNSPTSSMGKGSGGQIEGPPGANLFI 360

Query: 361 YHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGC 420
           YHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAIS MNGC
Sbjct: 361 YHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGC 420

Query: 421 QLGGKKLKVQLKRDNKQSKPY 439
           QLGGKKLKVQLKRDNKQSKPY
Sbjct: 421 QLGGKKLKVQLKRDNKQSKPY 438

BLAST of CmaCh17G011380.1 vs. TrEMBL
Match: A0A061DQ15_THECC (RNA-binding protein-defense related 1 isoform 2 OS=Theobroma cacao GN=TCM_004515 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 2.8e-197
Identity = 355/441 (80.50%), Postives = 392/441 (88.89%), Query Frame = 1

Query: 1   MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRA 60
           MAEG     +K     +E+SVKLFVGQVPKH+TEAQLLAMF+E ALVDEVNII+DKTTRA
Sbjct: 1   MAEG-----KKEKKATDEESVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRA 60

Query: 61  SRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV 120
           SRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNV
Sbjct: 61  SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNV 120

Query: 121 SEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSV 180
           SE EVS+LFS+YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+ ALEAINGKHKMEGS+V
Sbjct: 121 SEAEVSALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALDALEAINGKHKMEGSNV 180

Query: 181 PLVVKWADTEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGS 240
           PLVVKWADTEKERQAR+AQKAQSQASN+ NADS   SLFGA+P+GY  P+NGYGYQAPGS
Sbjct: 181 PLVVKWADTEKERQARRAQKAQSQASNISNADSPHPSLFGALPMGYAAPFNGYGYQAPGS 240

Query: 241 YGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYPA 300
           YGLMQY LPPMQNQ  F NMIP +NQG+AMRGI+PDL P +A RNY MPPASYVGSAYPA
Sbjct: 241 YGLMQYRLPPMQNQPAFHNMIPPVNQGSAMRGITPDLAPNIAPRNYVMPPASYVGSAYPA 300

Query: 301 VPCLQHPMAYPGGMMSPGVVSSSPG---PFTGGNNNSPTSSLGKGSGSQIEGPPGANLFI 360
           VP +Q+PMAYPGG+MS   ++SSPG   P    +N+S +SS+G  SG QIEGPPGANLFI
Sbjct: 301 VPGIQYPMAYPGGIMSHRPLTSSPGSVPPANTTSNSSSSSSVGTSSGGQIEGPPGANLFI 360

Query: 361 YHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGC 420
           YHIPQEFGD ELAN+F+ FGRVLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNGC
Sbjct: 361 YHIPQEFGDQELANAFQGFGRVLSAKVFVDKATGVSKCFGFVSYDSPAAAQNAINVMNGC 420

Query: 421 QLGGKKLKVQLKRDNKQSKPY 439
           QLGGKKLKVQLKRDNKQ+KPY
Sbjct: 421 QLGGKKLKVQLKRDNKQNKPY 436

BLAST of CmaCh17G011380.1 vs. TrEMBL
Match: A0A0D2R6M7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G007900 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 5.4e-196
Identity = 348/441 (78.91%), Postives = 389/441 (88.21%), Query Frame = 1

Query: 1   MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRA 60
           MAEG     +K      E+SVKLFVGQVPKH+TEAQ+LAMF+E ALVDEVNII+DK TRA
Sbjct: 1   MAEG-----KKEKKATNEESVKLFVGQVPKHMTEAQVLAMFEEFALVDEVNIIKDKATRA 60

Query: 61  SRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV 120
           SRGCCFVICPSR+EADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNV
Sbjct: 61  SRGCCFVICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNV 120

Query: 121 SEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSV 180
           SEDEVS+LFS+YGT+KDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGKHKMEGSSV
Sbjct: 121 SEDEVSALFSKYGTLKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 180

Query: 181 PLVVKWADTEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGS 240
           PLVVKWADTEKERQAR+AQKAQSQASN+ NADS   SLFGA+P+GY+PPYNGYGYQAPGS
Sbjct: 181 PLVVKWADTEKERQARRAQKAQSQASNMPNADSPHPSLFGALPMGYVPPYNGYGYQAPGS 240

Query: 241 YGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYPA 300
           YGLMQY LPPMQNQ  F NMIP +NQG+++RGI+PDL P +A RNY +PP SYVGSAYPA
Sbjct: 241 YGLMQYRLPPMQNQPAFNNMIPHVNQGSSLRGITPDLAPNIAPRNYPVPPTSYVGSAYPA 300

Query: 301 VPCLQHPMAYPGGMMSPGVVSSSPGPFTGGN---NNSPTSSLGKGSGSQIEGPPGANLFI 360
           VP LQ+PMAYPGG+M+  +++ SPG     N   N+S +S +G  SG  IEGPPGANLFI
Sbjct: 301 VPGLQYPMAYPGGIMNHRLLTGSPGSVPQANINSNSSSSSPVGTNSGGHIEGPPGANLFI 360

Query: 361 YHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGC 420
           YHIPQEFGD ELAN+F+ FGRVLS KVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNGC
Sbjct: 361 YHIPQEFGDQELANAFQGFGRVLSTKVFVDKATGVSKCFGFVSYDSPAAAQNAINMMNGC 420

Query: 421 QLGGKKLKVQLKRDNKQSKPY 439
           QLGGKKLKVQLKRDNKQ+KPY
Sbjct: 421 QLGGKKLKVQLKRDNKQNKPY 436

BLAST of CmaCh17G011380.1 vs. TrEMBL
Match: W9SZM7_9ROSA (CUGBP Elav-like family member 5 OS=Morus notabilis GN=L484_020442 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 5.4e-196
Identity = 353/433 (81.52%), Postives = 385/433 (88.91%), Query Frame = 1

Query: 9   ERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVI 68
           ERK    EE  SVKLFVGQVPK++TEAQLLAMFQE ALVDEVNII+DK TRASRGCCFVI
Sbjct: 7   ERKSGGSEE--SVKLFVGQVPKNMTEAQLLAMFQEFALVDEVNIIKDKVTRASRGCCFVI 66

Query: 69  CPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSSL 128
           CPSRQEADKA+NACHNKKTLPGAS+PLQVKYADGELERLEHKLF+GMLPKNVSE +VS+L
Sbjct: 67  CPSRQEADKAVNACHNKKTLPGASTPLQVKYADGELERLEHKLFVGMLPKNVSEADVSAL 126

Query: 129 FSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWAD 188
           FS+YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+A+LEAINGKHKMEGSSVPLVVKWAD
Sbjct: 127 FSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALASLEAINGKHKMEGSSVPLVVKWAD 186

Query: 189 TEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHL 248
           TEKERQARKAQKAQSQ SN+ N+D+Q  SLFGA+P+GY+PPYNGYGYQ PG+YGLMQY L
Sbjct: 187 TEKERQARKAQKAQSQVSNLPNSDNQHPSLFGALPMGYVPPYNGYGYQGPGTYGLMQYRL 246

Query: 249 PPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYPAVPCLQHPM 308
            PMQNQ GF NMIP +NQGNA+RGISPDL P M  RNYGMPP ++VGSAYP +P LQHPM
Sbjct: 247 SPMQNQPGFHNMIPPINQGNALRGISPDLPPNMTPRNYGMPPPNFVGSAYPGMPGLQHPM 306

Query: 309 AYPGGMMSPGVVSSSPG--PFTGGNNNSPTS-SLGKGSGSQIEGPPGANLFIYHIPQEFG 368
           AYPGGMMS   +S SPG  P    N+NS TS    KGSG Q+EGPPGANLFIYHIPQEFG
Sbjct: 307 AYPGGMMSHRPLSGSPGSMPPAVMNSNSATSPGSSKGSGGQVEGPPGANLFIYHIPQEFG 366

Query: 369 DLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGCQLGGKKLK 428
           D +LAN+F+ FGRVLSAKVFVDK +GVSKCFGFVSYDS EAAQSAIS MNG QLGGKKLK
Sbjct: 367 DQDLANAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGFQLGGKKLK 426

Query: 429 VQLKRDNKQSKPY 439
           VQLKRDNKQ+KPY
Sbjct: 427 VQLKRDNKQNKPY 437

BLAST of CmaCh17G011380.1 vs. TrEMBL
Match: B9S3Y1_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0556860 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 1.3e-194
Identity = 344/434 (79.26%), Postives = 385/434 (88.71%), Query Frame = 1

Query: 9   ERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVI 68
           E K   +  E+SVKLFVGQVPKH+TE QLLAMF+E ALVDEVNII+DKTTRASRGCCFVI
Sbjct: 3   EDKKEKKSSEESVKLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVI 62

Query: 69  CPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSSL 128
           CPSRQEADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EVS L
Sbjct: 63  CPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSEL 122

Query: 129 FSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWAD 188
           FS YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGKHKMEGSSVPLVVKWAD
Sbjct: 123 FSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWAD 182

Query: 189 TEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHL 248
           TEKERQAR+AQK QSQASN+ NADSQ  SLFGA+P+GY+P YNGYGYQAPG+YGLM Y L
Sbjct: 183 TEKERQARRAQKVQSQASNLPNADSQHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPYRL 242

Query: 249 PPMQNQSGFPNMIPQLNQGNAMR-GISPDLGPGMATRNYGMPPASYVGSAYPAVPCLQHP 308
           PP+Q+Q  F ++IP +NQGNA+R G+ PDLGP M  RNY +PPASYVGSAYPAVP +Q+P
Sbjct: 243 PPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQYP 302

Query: 309 MAYPGGMMSPGVVSSSPG---PFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEF 368
           MAYPGGMMSP  +SSSPG   P  G +N++ +S +   SG Q+EGPPG+NLFIYHIPQEF
Sbjct: 303 MAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSNLFIYHIPQEF 362

Query: 369 GDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGCQLGGKKL 428
           GD ELA++F+ +G+VLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNGCQLGGKKL
Sbjct: 363 GDQELASAFQPYGKVLSAKVFVDKATGVSKCFGFVSYDSPTAAQTAINMMNGCQLGGKKL 422

Query: 429 KVQLKRDNKQSKPY 439
           KVQLKRDNKQSKPY
Sbjct: 423 KVQLKRDNKQSKPY 436

BLAST of CmaCh17G011380.1 vs. TAIR10
Match: AT4G03110.1 (AT4G03110.1 RNA-binding protein-defense related 1)

HSP 1 Score: 569.7 bits (1467), Expect = 1.6e-162
Identity = 297/433 (68.59%), Postives = 350/433 (80.83%), Query Frame = 1

Query: 9   ERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVI 68
           E      EEE+SVKLFVGQ+PKH++E+QLL +FQE A+VDEVNII+DK TRASRGCCF++
Sbjct: 6   EENREKNEEEESVKLFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRGCCFLL 65

Query: 69  CPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSSL 128
           CPSR+EADK +NACHNKKTLPGA+S LQVKYADGELERLEHKLF+GMLPKNVSE EV SL
Sbjct: 66  CPSREEADKLVNACHNKKTLPGANSLLQVKYADGELERLEHKLFVGMLPKNVSEAEVQSL 125

Query: 129 FSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWAD 188
           FS+YGTIKDLQILRG+QQTSKGCAFLKYETK+QAV+A+E+INGKHKMEGS+VPLVVKWAD
Sbjct: 126 FSKYGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLVVKWAD 185

Query: 189 TEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGY-QAPGSYGLMQYH 248
           TE+ER  R+ QKAQS  + + N D    SLFGA+P+GY+PPYNGYGY Q PG+YG   Y 
Sbjct: 186 TERERHTRRLQKAQSHIARLGNGDPTNPSLFGALPMGYVPPYNGYGYHQPPGTYG---YM 245

Query: 249 LPPMQNQSGFPNMIPQLNQG--NAMRGISPD-LGPGMATRNYGMPPASYVGSAYPAVPCL 308
           LPP+QNQ+ F NMI Q NQG  NA++G SPD + P +A RN+ MPP +Y+GS YPA+   
Sbjct: 246 LPPIQNQAAFSNMIAQPNQGNNNALQGTSPDSVPPRLARRNFPMPPGNYMGSGYPAMRGH 305

Query: 309 QHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHIPQEF 368
             P AYP G++SP  +SSSPG  + G   S    +G  S  Q EGP GANLFIY+IP+EF
Sbjct: 306 PFPFAYPRGIVSPRPLSSSPGSISPG--MSTPLGIGLSSVVQTEGPEGANLFIYNIPREF 365

Query: 369 GDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGCQLGGKKL 428
           GD ELA +F++FG VLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI  MNG  LGGKKL
Sbjct: 366 GDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAIDMMNGRHLGGKKL 425

Query: 429 KVQLKRDNKQSKP 438
           KVQLKRD+   +P
Sbjct: 426 KVQLKRDSNNGQP 433

BLAST of CmaCh17G011380.1 vs. TAIR10
Match: AT1G03457.2 (AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 496.5 bits (1277), Expect = 1.7e-140
Identity = 268/436 (61.47%), Postives = 327/436 (75.00%), Query Frame = 1

Query: 14  SQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVICPSRQ 73
           + E E+ VKLFVGQVPKH+TE QLL +F+E ++V+EVNII++KTTRA RGCCF+ CP+R+
Sbjct: 5   TMENEERVKLFVGQVPKHMTEIQLLTLFREFSIVNEVNIIKEKTTRAPRGCCFLTCPTRE 64

Query: 74  EADKAINACHNKKTLPGASSPLQVKYADGELERL---------EHKLFIGMLPKNVSEDE 133
           +ADK IN+ HNKKTLPGASSPLQVKYADGELERL         EHKLF+GMLPKNVSE E
Sbjct: 65  DADKVINSFHNKKTLPGASSPLQVKYADGELERLDVLDCSCNPEHKLFVGMLPKNVSETE 124

Query: 134 VSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVV 193
           V SLFS+YGTIKDLQILRGS QTSKGC FLKYE+K+QAVAA+EA+NG+H MEG++VPL+V
Sbjct: 125 VQSLFSEYGTIKDLQILRGSLQTSKGCLFLKYESKEQAVAAMEALNGRHIMEGANVPLIV 184

Query: 194 KWADTEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGSYGLM 253
           KWADTEKERQAR+  K QS  S +   D Q  S+FGA+P+ Y+PPYNGYGY  PG+YG  
Sbjct: 185 KWADTEKERQARRLLKVQSHVSRL---DPQNPSMFGALPMSYVPPYNGYGYHVPGTYG-- 244

Query: 254 QYHLPPMQNQSGFPNMI-PQLNQGNAMRG--ISPDLGPGMA-TRNYGMPPASYVGSAYPA 313
            Y LPP+Q Q  F N+I P    G A++G  ++  + P +A  RN+   P +     Y  
Sbjct: 245 -YMLPPIQTQHAFHNVISPNQGNGRALQGTALTESVPPRLAPRRNF---PTALGNYGYHG 304

Query: 314 VPCLQHPMAYPGGMMSPGVVSSSPGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFIYHI 373
              LQ+PMA+P GM+ P +  ++  P    N  S  SSL      Q EGP GANLFIY+I
Sbjct: 305 ---LQYPMAFPRGMIPPRLPLTTVSPGISNNGTSIPSSL------QTEGPAGANLFIYNI 364

Query: 374 PQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGCQLG 433
           P+EF D ELA +F+ FG+VLSAKVFVDK +G+SKCFGF+SYDS  AAQ+AI+ MNGCQL 
Sbjct: 365 PREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGFISYDSQAAAQNAINTMNGCQLS 422

Query: 434 GKKLKVQLKRDNKQSK 437
           GKKLKVQLKRDN Q +
Sbjct: 425 GKKLKVQLKRDNGQQQ 422

BLAST of CmaCh17G011380.1 vs. TAIR10
Match: AT4G16280.2 (AT4G16280.2 RNA binding;abscisic acid binding)

HSP 1 Score: 162.2 bits (409), Expect = 7.5e-40
Identity = 108/307 (35.18%), Postives = 164/307 (53.42%), Query Frame = 1

Query: 16  EEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVICPSRQEA 75
           +   +VKLFVG VP+  TE ++   F++   V EV +I+DK T   +GCCFV   + ++A
Sbjct: 115 DRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDA 174

Query: 76  DKAINACHNKKTLPGASSPLQVKYADGELER---LEHKLFIGMLPKNVSEDEVSSLFSQY 135
           D+AI A HN+ TLPG + P+QV+YADGE ER   LE KLF+G L K  +E EV  +F Q+
Sbjct: 175 DRAIRALHNQITLPGGTGPVQVRYADGERERIGTLEFKLFVGSLNKQATEKEVEEIFLQF 234

Query: 136 GTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWADTEKE 195
           G ++D+ ++R   + S+GC F+KY +K+ A+AA++ +NG + M G + PL+V++A+ ++ 
Sbjct: 235 GHVEDVYLMRDEYRQSRGCGFVKYSSKETAMAAIDGLNGTYTMRGCNQPLIVRFAEPKRP 294

Query: 196 RQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQ---YHLP 255
           +     + A                    V LG  P +   G +   ++G       H  
Sbjct: 295 KPGESREMAP------------------PVGLGSGPRFQASGPRPTSNFGDSSGDVSHTN 354

Query: 256 PMQNQSGFPNMIPQLNQGNAMRGISPDLG--PGMAT--RNYGMPPASYVGSAYPAVPCLQ 313
           P +  +   N+ P  N G  +RG   D    PG AT   N G P   Y       VP L 
Sbjct: 355 PWRPATS-RNVGPPSNTG--IRGAGSDFSPKPGQATLPSNQGGPLGGY------GVPPL- 393

BLAST of CmaCh17G011380.1 vs. TAIR10
Match: AT2G47310.1 (AT2G47310.1 flowering time control protein-related / FCA gamma-related)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23
Identity = 64/202 (31.68%), Postives = 109/202 (53.96%), Query Frame = 1

Query: 6   GGGERKGSSQEEEDSV-----KLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRA 65
           G   RK  SQ   D+      KL+V  + K  TE  +  +F++   V E+ + +DK T  
Sbjct: 90  GSSLRKRRSQSATDNADGSIAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGE 149

Query: 66  SRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERL---------EHKL 125
               CF+     +E + AI A   + T PG   P++V++A+ E ER+           KL
Sbjct: 150 RAAYCFIKYKKVEEGNAAIAALTEQFTFPGEMLPVKVRFAEAERERIGFAPVQLPDNPKL 209

Query: 126 FIGMLPKNVSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAING 185
           ++  L K  ++ EV+ +FS+YG I+D+ +     +  +G AF+++  K+ A+AA++A+NG
Sbjct: 210 YVRCLNKQTTKMEVNEVFSRYGIIEDIYMALDDMKICRGYAFVQFSCKEMALAAIKALNG 269

Query: 186 KHKMEGSSVPLVVKWADTEKER 194
              + GS  PL+V++AD +K R
Sbjct: 270 LFTIRGSDQPLIVRFADPKKPR 291

BLAST of CmaCh17G011380.1 vs. TAIR10
Match: AT1G49760.1 (AT1G49760.1 poly(A) binding protein 8)

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-12
Identity = 46/171 (26.90%), Postives = 80/171 (46.78%), Query Frame = 1

Query: 2   AEGSGGGERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRAS 61
           A  + G     +   ++ +  L+VG +   +T++QL   F +   V  V + RD TTR S
Sbjct: 26  AAAAAGAAAAAAGAAQQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRS 85

Query: 62  RGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERL-EHKLFIGMLPKNV 121
            G  +V   + Q+A +A+N   N   L G +  +     D  L +     +FI  L K++
Sbjct: 86  LGYGYVNYATPQDASRALNEL-NFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSI 145

Query: 122 SEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAING 172
               +   FS +G I   ++       SKG  F++Y+T + A  A++ +NG
Sbjct: 146 DHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNG 195

BLAST of CmaCh17G011380.1 vs. NCBI nr
Match: gi|449462310|ref|XP_004148884.1| (PREDICTED: RNA-binding protein BRN1 [Cucumis sativus])

HSP 1 Score: 794.7 bits (2051), Expect = 8.4e-227
Identity = 411/441 (93.20%), Postives = 417/441 (94.56%), Query Frame = 1

Query: 1   MAEGSGGGERKGSS-QEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTR 60
           MAEGS GGERK SS QEEEDSVKLFVGQVPKH+TE QLL MFQE ALVDEVNIIRDKTTR
Sbjct: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60

Query: 61  ASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
           ASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN
Sbjct: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120

Query: 121 VSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSS 180
           VSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSS
Sbjct: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180

Query: 181 VPLVVKWADTEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPG 240
           VPLVVKWADTEKERQARKAQKAQSQA+NVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPG
Sbjct: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240

Query: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYP 300
           SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGI PDLGPGMATRNY MPPASY  SAYP
Sbjct: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP 300

Query: 301 AVPCLQHPMAYPGGMMSPGVVSSS--PGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFI 360
            VP LQHPMAYPGGMMSPGVVSSS  PGPFTGG  NSPTSS+GKGSG QIEGPPGANLFI
Sbjct: 301 GVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG-KNSPTSSMGKGSGGQIEGPPGANLFI 360

Query: 361 YHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGC 420
           YHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAIS MNGC
Sbjct: 361 YHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISTMNGC 420

Query: 421 QLGGKKLKVQLKRDNKQSKPY 439
           QLGGKKLKVQLKRDNKQSKPY
Sbjct: 421 QLGGKKLKVQLKRDNKQSKPY 438

BLAST of CmaCh17G011380.1 vs. NCBI nr
Match: gi|659101095|ref|XP_008451423.1| (PREDICTED: CUGBP Elav-like family member 5 [Cucumis melo])

HSP 1 Score: 794.7 bits (2051), Expect = 8.4e-227
Identity = 411/441 (93.20%), Postives = 417/441 (94.56%), Query Frame = 1

Query: 1   MAEGSGGGERKGSS-QEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTR 60
           MAEGS GGERK SS QEEEDSVKLFVGQVPKH+TE QLL MFQE ALVDEVNIIRDKTTR
Sbjct: 1   MAEGSRGGERKESSNQEEEDSVKLFVGQVPKHMTEPQLLTMFQEFALVDEVNIIRDKTTR 60

Query: 61  ASRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120
           ASRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN
Sbjct: 61  ASRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN 120

Query: 121 VSEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSS 180
           VSEDEVS LFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGK KMEGSS
Sbjct: 121 VSEDEVSGLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKCKMEGSS 180

Query: 181 VPLVVKWADTEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPG 240
           VPLVVKWADTEKERQARKAQKAQSQA+NVLNADSQ  SLFGA+PLGY+PPYNGYGYQAPG
Sbjct: 181 VPLVVKWADTEKERQARKAQKAQSQATNVLNADSQHPSLFGAMPLGYVPPYNGYGYQAPG 240

Query: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYP 300
           SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGI PDLGPGMATRNY MPPASY  SAYP
Sbjct: 241 SYGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYP 300

Query: 301 AVPCLQHPMAYPGGMMSPGVVSSS--PGPFTGGNNNSPTSSLGKGSGSQIEGPPGANLFI 360
            VP LQHPMAYPGGMMSPGVVSSS  PGPFTGG  NSPTSS+GKGSG QIEGPPGANLFI
Sbjct: 301 GVPALQHPMAYPGGMMSPGVVSSSPGPGPFTGG-KNSPTSSMGKGSGGQIEGPPGANLFI 360

Query: 361 YHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGC 420
           YHIPQEFGD ELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDS EAAQSAIS MNGC
Sbjct: 361 YHIPQEFGDRELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSAEAAQSAISMMNGC 420

Query: 421 QLGGKKLKVQLKRDNKQSKPY 439
           QLGGKKLKVQLKRDNKQSKPY
Sbjct: 421 QLGGKKLKVQLKRDNKQSKPY 438

BLAST of CmaCh17G011380.1 vs. NCBI nr
Match: gi|590718175|ref|XP_007050757.1| (RNA-binding protein-defense related 1 isoform 2 [Theobroma cacao])

HSP 1 Score: 696.0 bits (1795), Expect = 4.1e-197
Identity = 355/441 (80.50%), Postives = 392/441 (88.89%), Query Frame = 1

Query: 1   MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRA 60
           MAEG     +K     +E+SVKLFVGQVPKH+TEAQLLAMF+E ALVDEVNII+DKTTRA
Sbjct: 1   MAEG-----KKEKKATDEESVKLFVGQVPKHMTEAQLLAMFKEFALVDEVNIIKDKTTRA 60

Query: 61  SRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV 120
           SRGCCFVICPSRQEADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNV
Sbjct: 61  SRGCCFVICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNV 120

Query: 121 SEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSV 180
           SE EVS+LFS+YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+ ALEAINGKHKMEGS+V
Sbjct: 121 SEAEVSALFSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALDALEAINGKHKMEGSNV 180

Query: 181 PLVVKWADTEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGS 240
           PLVVKWADTEKERQAR+AQKAQSQASN+ NADS   SLFGA+P+GY  P+NGYGYQAPGS
Sbjct: 181 PLVVKWADTEKERQARRAQKAQSQASNISNADSPHPSLFGALPMGYAAPFNGYGYQAPGS 240

Query: 241 YGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYPA 300
           YGLMQY LPPMQNQ  F NMIP +NQG+AMRGI+PDL P +A RNY MPPASYVGSAYPA
Sbjct: 241 YGLMQYRLPPMQNQPAFHNMIPPVNQGSAMRGITPDLAPNIAPRNYVMPPASYVGSAYPA 300

Query: 301 VPCLQHPMAYPGGMMSPGVVSSSPG---PFTGGNNNSPTSSLGKGSGSQIEGPPGANLFI 360
           VP +Q+PMAYPGG+MS   ++SSPG   P    +N+S +SS+G  SG QIEGPPGANLFI
Sbjct: 301 VPGIQYPMAYPGGIMSHRPLTSSPGSVPPANTTSNSSSSSSVGTSSGGQIEGPPGANLFI 360

Query: 361 YHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGC 420
           YHIPQEFGD ELAN+F+ FGRVLSAKVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNGC
Sbjct: 361 YHIPQEFGDQELANAFQGFGRVLSAKVFVDKATGVSKCFGFVSYDSPAAAQNAINVMNGC 420

Query: 421 QLGGKKLKVQLKRDNKQSKPY 439
           QLGGKKLKVQLKRDNKQ+KPY
Sbjct: 421 QLGGKKLKVQLKRDNKQNKPY 436

BLAST of CmaCh17G011380.1 vs. NCBI nr
Match: gi|703161142|ref|XP_010112715.1| (CUGBP Elav-like family member 5 [Morus notabilis])

HSP 1 Score: 691.8 bits (1784), Expect = 7.7e-196
Identity = 353/433 (81.52%), Postives = 385/433 (88.91%), Query Frame = 1

Query: 9   ERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRASRGCCFVI 68
           ERK    EE  SVKLFVGQVPK++TEAQLLAMFQE ALVDEVNII+DK TRASRGCCFVI
Sbjct: 7   ERKSGGSEE--SVKLFVGQVPKNMTEAQLLAMFQEFALVDEVNIIKDKVTRASRGCCFVI 66

Query: 69  CPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEDEVSSL 128
           CPSRQEADKA+NACHNKKTLPGAS+PLQVKYADGELERLEHKLF+GMLPKNVSE +VS+L
Sbjct: 67  CPSRQEADKAVNACHNKKTLPGASTPLQVKYADGELERLEHKLFVGMLPKNVSEADVSAL 126

Query: 129 FSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSVPLVVKWAD 188
           FS+YGTIKDLQILRGSQQTSKGCAFLKYETK+QA+A+LEAINGKHKMEGSSVPLVVKWAD
Sbjct: 127 FSKYGTIKDLQILRGSQQTSKGCAFLKYETKEQALASLEAINGKHKMEGSSVPLVVKWAD 186

Query: 189 TEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGSYGLMQYHL 248
           TEKERQARKAQKAQSQ SN+ N+D+Q  SLFGA+P+GY+PPYNGYGYQ PG+YGLMQY L
Sbjct: 187 TEKERQARKAQKAQSQVSNLPNSDNQHPSLFGALPMGYVPPYNGYGYQGPGTYGLMQYRL 246

Query: 249 PPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYPAVPCLQHPM 308
            PMQNQ GF NMIP +NQGNA+RGISPDL P M  RNYGMPP ++VGSAYP +P LQHPM
Sbjct: 247 SPMQNQPGFHNMIPPINQGNALRGISPDLPPNMTPRNYGMPPPNFVGSAYPGMPGLQHPM 306

Query: 309 AYPGGMMSPGVVSSSPG--PFTGGNNNSPTS-SLGKGSGSQIEGPPGANLFIYHIPQEFG 368
           AYPGGMMS   +S SPG  P    N+NS TS    KGSG Q+EGPPGANLFIYHIPQEFG
Sbjct: 307 AYPGGMMSHRPLSGSPGSMPPAVMNSNSATSPGSSKGSGGQVEGPPGANLFIYHIPQEFG 366

Query: 369 DLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGCQLGGKKLK 428
           D +LAN+F+ FGRVLSAKVFVDK +GVSKCFGFVSYDS EAAQSAIS MNG QLGGKKLK
Sbjct: 367 DQDLANAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGFQLGGKKLK 426

Query: 429 VQLKRDNKQSKPY 439
           VQLKRDNKQ+KPY
Sbjct: 427 VQLKRDNKQNKPY 437

BLAST of CmaCh17G011380.1 vs. NCBI nr
Match: gi|823202678|ref|XP_012435896.1| (PREDICTED: RNA-binding protein BRN1-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 691.8 bits (1784), Expect = 7.7e-196
Identity = 348/441 (78.91%), Postives = 389/441 (88.21%), Query Frame = 1

Query: 1   MAEGSGGGERKGSSQEEEDSVKLFVGQVPKHITEAQLLAMFQELALVDEVNIIRDKTTRA 60
           MAEG     +K      E+SVKLFVGQVPKH+TEAQ+LAMF+E ALVDEVNII+DK TRA
Sbjct: 1   MAEG-----KKEKKATNEESVKLFVGQVPKHMTEAQVLAMFEEFALVDEVNIIKDKATRA 60

Query: 61  SRGCCFVICPSRQEADKAINACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNV 120
           SRGCCFVICPSR+EADKA+NACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNV
Sbjct: 61  SRGCCFVICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNV 120

Query: 121 SEDEVSSLFSQYGTIKDLQILRGSQQTSKGCAFLKYETKDQAVAALEAINGKHKMEGSSV 180
           SEDEVS+LFS+YGT+KDLQILRGSQQTSKGCAFLKYETK+QA+AALEAINGKHKMEGSSV
Sbjct: 121 SEDEVSALFSKYGTLKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSV 180

Query: 181 PLVVKWADTEKERQARKAQKAQSQASNVLNADSQCSSLFGAVPLGYIPPYNGYGYQAPGS 240
           PLVVKWADTEKERQAR+AQKAQSQASN+ NADS   SLFGA+P+GY+PPYNGYGYQAPGS
Sbjct: 181 PLVVKWADTEKERQARRAQKAQSQASNMPNADSPHPSLFGALPMGYVPPYNGYGYQAPGS 240

Query: 241 YGLMQYHLPPMQNQSGFPNMIPQLNQGNAMRGISPDLGPGMATRNYGMPPASYVGSAYPA 300
           YGLMQY LPPMQNQ  F NMIP +NQG+++RGI+PDL P +A RNY +PP SYVGSAYPA
Sbjct: 241 YGLMQYRLPPMQNQPAFNNMIPHVNQGSSLRGITPDLAPNIAPRNYPVPPTSYVGSAYPA 300

Query: 301 VPCLQHPMAYPGGMMSPGVVSSSPGPFTGGN---NNSPTSSLGKGSGSQIEGPPGANLFI 360
           VP LQ+PMAYPGG+M+  +++ SPG     N   N+S +S +G  SG  IEGPPGANLFI
Sbjct: 301 VPGLQYPMAYPGGIMNHRLLTGSPGSVPQANINSNSSSSSPVGTNSGGHIEGPPGANLFI 360

Query: 361 YHIPQEFGDLELANSFRAFGRVLSAKVFVDKTSGVSKCFGFVSYDSVEAAQSAISRMNGC 420
           YHIPQEFGD ELAN+F+ FGRVLS KVFVDK +GVSKCFGFVSYDS  AAQ+AI+ MNGC
Sbjct: 361 YHIPQEFGDQELANAFQGFGRVLSTKVFVDKATGVSKCFGFVSYDSPAAAQNAINMMNGC 420

Query: 421 QLGGKKLKVQLKRDNKQSKPY 439
           QLGGKKLKVQLKRDNKQ+KPY
Sbjct: 421 QLGGKKLKVQLKRDNKQNKPY 436

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BRN1L_ARATH2.8e-16168.59RNA-binding protein BRN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1[more]
BRN2L_ARATH1.4e-14162.76RNA-binding protein BRN2 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1[more]
CELF5_XENTR9.4e-6937.39CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5 PE=2 SV=1[more]
CELF3_DANRE4.4e-6637.20CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2[more]
CELF5_HUMAN2.8e-6536.98CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K5R5_CUCSA5.9e-22793.20Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390170 PE=4 SV=1[more]
A0A061DQ15_THECC2.8e-19780.50RNA-binding protein-defense related 1 isoform 2 OS=Theobroma cacao GN=TCM_004515... [more]
A0A0D2R6M7_GOSRA5.4e-19678.91Uncharacterized protein OS=Gossypium raimondii GN=B456_008G007900 PE=4 SV=1[more]
W9SZM7_9ROSA5.4e-19681.52CUGBP Elav-like family member 5 OS=Morus notabilis GN=L484_020442 PE=4 SV=1[more]
B9S3Y1_RICCO1.3e-19479.26RNA binding protein, putative OS=Ricinus communis GN=RCOM_0556860 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G03110.11.6e-16268.59 RNA-binding protein-defense related 1[more]
AT1G03457.21.7e-14061.47 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G16280.27.5e-4035.18 RNA binding;abscisic acid binding[more]
AT2G47310.11.3e-2331.68 flowering time control protein-related / FCA gamma-related[more]
AT1G49760.15.0e-1226.90 poly(A) binding protein 8[more]
Match NameE-valueIdentityDescription
gi|449462310|ref|XP_004148884.1|8.4e-22793.20PREDICTED: RNA-binding protein BRN1 [Cucumis sativus][more]
gi|659101095|ref|XP_008451423.1|8.4e-22793.20PREDICTED: CUGBP Elav-like family member 5 [Cucumis melo][more]
gi|590718175|ref|XP_007050757.1|4.1e-19780.50RNA-binding protein-defense related 1 isoform 2 [Theobroma cacao][more]
gi|703161142|ref|XP_010112715.1|7.7e-19681.52CUGBP Elav-like family member 5 [Morus notabilis][more]
gi|823202678|ref|XP_012435896.1|7.7e-19678.91PREDICTED: RNA-binding protein BRN1-like isoform X1 [Gossypium raimondii][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR002343Hud_Sxl_RNA
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0000166nucleotide binding
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh17G011380CmaCh17G011380gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh17G011380.1CmaCh17G011380.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G011380.1.exon.9CmaCh17G011380.1.exon.9exon
CmaCh17G011380.1.exon.8CmaCh17G011380.1.exon.8exon
CmaCh17G011380.1.exon.7CmaCh17G011380.1.exon.7exon
CmaCh17G011380.1.exon.6CmaCh17G011380.1.exon.6exon
CmaCh17G011380.1.exon.5CmaCh17G011380.1.exon.5exon
CmaCh17G011380.1.exon.4CmaCh17G011380.1.exon.4exon
CmaCh17G011380.1.exon.3CmaCh17G011380.1.exon.3exon
CmaCh17G011380.1.exon.2CmaCh17G011380.1.exon.2exon
CmaCh17G011380.1.exon.1CmaCh17G011380.1.exon.1exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G011380.1.five_prime_UTR.1CmaCh17G011380.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G011380.1.CDS.1CmaCh17G011380.1.CDS.1CDS
CmaCh17G011380.1.CDS.2CmaCh17G011380.1.CDS.2CDS
CmaCh17G011380.1.CDS.3CmaCh17G011380.1.CDS.3CDS
CmaCh17G011380.1.CDS.4CmaCh17G011380.1.CDS.4CDS
CmaCh17G011380.1.CDS.5CmaCh17G011380.1.CDS.5CDS
CmaCh17G011380.1.CDS.6CmaCh17G011380.1.CDS.6CDS
CmaCh17G011380.1.CDS.7CmaCh17G011380.1.CDS.7CDS
CmaCh17G011380.1.CDS.8CmaCh17G011380.1.CDS.8CDS
CmaCh17G011380.1.CDS.9CmaCh17G011380.1.CDS.9CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh17G011380.1.three_prime_UTR.1CmaCh17G011380.1.three_prime_UTR.1three_prime_UTR


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 111..174
score: 3.9E-17coord: 355..425
score: 1.1E-14coord: 23..87
score: 1.2
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 110..185
score: 1.4E-18coord: 354..427
score: 7.2E-20coord: 22..98
score: 1.0
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 109..189
score: 16.5coord: 21..102
score: 13.311coord: 353..431
score: 16
IPR002343Paraneoplastic encephalomyelitis antigenPRINTSPR00961HUDSXLRNAcoord: 114..129
score: 1.9E-7coord: 129..141
score: 1.9E-7coord: 170..187
score: 1.9E-7coord: 21..36
score: 1.
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 12..85
score: 2.7E-18coord: 350..437
score: 2.2E-23coord: 86..198
score: 5.0
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 350..433
score: 9.51E-42coord: 109..199
score: 9.51E-42coord: 10..104
score: 7.12
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 1..245
score: 1.7E-192coord: 298..314
score: 1.7E-192coord: 349..435
score: 1.7E
NoneNo IPR availablePANTHERPTHR24012:SF414SUBFAMILY NOT NAMEDcoord: 1..245
score: 1.7E-192coord: 349..435
score: 1.7E-192coord: 298..314
score: 1.7E