CmaCh17G010480.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAAGGAAAAACAGCAATGTGGGTCGTAGAGCATGGAACTTTCTTCGTCTAGCCATCATATGGGCTAGAAAAGGTGGTGTTTTCAAGCGGAGGTTTCTCATGGATCACCTTCGCCTTGTCCCCAAGTTTATAAAGACCCTCGGTCACTCAACGCCCCGTGGCCACCTACATTACGGTGATCATGAGCTTTCCTTCGACGAAACGCCTGTTTTCCACATAAGGATGCATCGTCCTACCTCCATGCGATTCCACTTACCCTGCATTACTCCAGAGACAGTTGATTTTGAATACGAGTTTGAAGACGACTGTGACAGTGACGATGATGGTAGTGAAGTTTATAGCCAGGATAGCGAGCAGAGGAGTTCGGGATATGAGGGTGGGGAGGAACAAGAGGATGAAGAAGAAGTGGAAGAAAATGGGATTGATTTGAGAGCTGAGAAGTTCATAGCTGAGTTCTATGAGCAAATGAAAATGCAAAGACAGATTTCATTTTCACAATATGATAAAAATCATTGA ATGCCAAGGAAAAACAGCAATGTGGGTCGTAGAGCATGGAACTTTCTTCGTCTAGCCATCATATGGGCTAGAAAAGGTGGTGTTTTCAAGCGGAGGTTTCTCATGGATCACCTTCGCCTTGTCCCCAAGTTTATAAAGACCCTCGGTCACTCAACGCCCCGTGGCCACCTACATTACGGTGATCATGAGCTTTCCTTCGACGAAACGCCTGTTTTCCACATAAGGATGCATCGTCCTACCTCCATGCGATTCCACTTACCCTGCATTACTCCAGAGACAGTTGATTTTGAATACGAGTTTGAAGACGACTGTGACAGTGACGATGATGGTAGTGAAGTTTATAGCCAGGATAGCGAGCAGAGGAGTTCGGGATATGAGGGTGGGGAGGAACAAGAGGATGAAGAAGAAGTGGAAGAAAATGGGATTGATTTGAGAGCTGAGAAGTTCATAGCTGAGTTCTATGAGCAAATGAAAATGCAAAGACAGATTTCATTTTCACAATATGATAAAAATCATTGA ATGCCAAGGAAAAACAGCAATGTGGGTCGTAGAGCATGGAACTTTCTTCGTCTAGCCATCATATGGGCTAGAAAAGGTGGTGTTTTCAAGCGGAGGTTTCTCATGGATCACCTTCGCCTTGTCCCCAAGTTTATAAAGACCCTCGGTCACTCAACGCCCCGTGGCCACCTACATTACGGTGATCATGAGCTTTCCTTCGACGAAACGCCTGTTTTCCACATAAGGATGCATCGTCCTACCTCCATGCGATTCCACTTACCCTGCATTACTCCAGAGACAGTTGATTTTGAATACGAGTTTGAAGACGACTGTGACAGTGACGATGATGGTAGTGAAGTTTATAGCCAGGATAGCGAGCAGAGGAGTTCGGGATATGAGGGTGGGGAGGAACAAGAGGATGAAGAAGAAGTGGAAGAAAATGGGATTGATTTGAGAGCTGAGAAGTTCATAGCTGAGTTCTATGAGCAAATGAAAATGCAAAGACAGATTTCATTTTCACAATATGATAAAAATCATTGA MPRKNSNVGRRAWNFLRLAIIWARKGGVFKRRFLMDHLRLVPKFIKTLGHSTPRGHLHYGDHELSFDETPVFHIRMHRPTSMRFHLPCITPETVDFEYEFEDDCDSDDDGSEVYSQDSEQRSSGYEGGEEQEDEEEVEENGIDLRAEKFIAEFYEQMKMQRQISFSQYDKNH
BLAST of CmaCh17G010480.1 vs. TrEMBL
Match: A0A0A0K9H5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407500 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.3e-65 Identity = 133/174 (76.44%), Postives = 153/174 (87.93%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. TrEMBL
Match: B9GSF8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s19990g PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 3.1e-46 Identity = 106/178 (59.55%), Postives = 138/178 (77.53%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. TrEMBL
Match: A0A061DS51_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_004768 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.1e-43 Identity = 102/178 (57.30%), Postives = 133/178 (74.72%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. TrEMBL
Match: V4TW09_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022416mg PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.6e-42 Identity = 100/185 (54.05%), Postives = 136/185 (73.51%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. TrEMBL
Match: A0A067H4X9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029693mg PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.6e-42 Identity = 100/185 (54.05%), Postives = 136/185 (73.51%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. TAIR10
Match: AT5G38700.1 (AT5G38700.1 unknown protein) HSP 1 Score: 142.5 bits (358), Expect = 2.4e-34 Identity = 83/182 (45.60%), Postives = 113/182 (62.09%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. TAIR10
Match: AT4G02170.1 (AT4G02170.1 unknown protein) HSP 1 Score: 119.4 bits (298), Expect = 2.2e-27 Identity = 74/174 (42.53%), Postives = 111/174 (63.79%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. NCBI nr
Match: gi|659101530|ref|XP_008451654.1| (PREDICTED: uncharacterized protein LOC103492886 [Cucumis melo]) HSP 1 Score: 270.0 bits (689), Expect = 2.8e-69 Identity = 139/173 (80.35%), Postives = 156/173 (90.17%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. NCBI nr
Match: gi|778728197|ref|XP_004136158.2| (PREDICTED: uncharacterized protein LOC101220264 [Cucumis sativus]) HSP 1 Score: 257.3 bits (656), Expect = 1.9e-65 Identity = 133/174 (76.44%), Postives = 153/174 (87.93%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. NCBI nr
Match: gi|224064480|ref|XP_002301497.1| (hypothetical protein POPTR_0002s19990g [Populus trichocarpa]) HSP 1 Score: 193.0 bits (489), Expect = 4.4e-46 Identity = 106/178 (59.55%), Postives = 138/178 (77.53%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. NCBI nr
Match: gi|743897837|ref|XP_011042207.1| (PREDICTED: uncharacterized protein LOC105137950 [Populus euphratica]) HSP 1 Score: 192.2 bits (487), Expect = 7.5e-46 Identity = 104/178 (58.43%), Postives = 135/178 (75.84%), Query Frame = 1
BLAST of CmaCh17G010480.1 vs. NCBI nr
Match: gi|743940321|ref|XP_011014630.1| (PREDICTED: uncharacterized protein LOC105118384 [Populus euphratica]) HSP 1 Score: 188.7 bits (478), Expect = 8.3e-45 Identity = 103/178 (57.87%), Postives = 134/178 (75.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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