CmaCh12G005630.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACCGGTGGTGTTTTACCTGAGAGGACCATCCGCCCGCCGTAACTTCCCGGACCTGATCTTACAGGACATGAATCACAAGCTGCTCGATTTTCCCCCTTCTTCAATACGCAGAAGAGCTATTGAGGTCGGTGCTAGAGTCGATGCCGCTGCCCACCATGCTTCTCAACGCCAATCCAAACCCATTTCCGACAAGCCTGATTTGAACCAGTTTCCGGACCCAGAAAGCTCCGACGAAGATTGA ATGACACCGGTGGTGTTTTACCTGAGAGGACCATCCGCCCGCCGTAACTTCCCGGACCTGATCTTACAGGACATGAATCACAAGCTGCTCGATTTTCCCCCTTCTTCAATACGCAGAAGAGCTATTGAGGTCGGTGCTAGAGTCGATGCCGCTGCCCACCATGCTTCTCAACGCCAATCCAAACCCATTTCCGACAAGCCTGATTTGAACCAGTTTCCGGACCCAGAAAGCTCCGACGAAGATTGA ATGACACCGGTGGTGTTTTACCTGAGAGGACCATCCGCCCGCCGTAACTTCCCGGACCTGATCTTACAGGACATGAATCACAAGCTGCTCGATTTTCCCCCTTCTTCAATACGCAGAAGAGCTATTGAGGTCGGTGCTAGAGTCGATGCCGCTGCCCACCATGCTTCTCAACGCCAATCCAAACCCATTTCCGACAAGCCTGATTTGAACCAGTTTCCGGACCCAGAAAGCTCCGACGAAGATTGA MTPVVFYLRGPSARRNFPDLILQDMNHKLLDFPPSSIRRRAIEVGARVDAAAHHASQRQSKPISDKPDLNQFPDPESSDED
BLAST of CmaCh12G005630.1 vs. Swiss-Prot
Match: RAP21_ARATH (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana GN=RAP2-1 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 2.6e-12 Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.1e-06 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 6.1e-06 Identity = 36/98 (36.73%), Postives = 50/98 (51.02%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TrEMBL
Match: A0A0A0LR87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G356600 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.3e-28 Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TrEMBL
Match: A0A125R6G9_BETPL (ERF11 OS=Betula platyphylla PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.5e-16 Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TrEMBL
Match: A0A0A0L4Y9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G641590 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 9.5e-14 Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TrEMBL
Match: M5XH14_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012302mg PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.1e-13 Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TrEMBL
Match: V9M5D1_MANES (ERF/AP2 domain-containing transcription factor OS=Manihot esculenta GN=RAP2.1 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.7e-13 Identity = 47/81 (58.02%), Postives = 60/81 (74.07%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TAIR10
Match: AT1G46768.1 (AT1G46768.1 related to AP2 1) HSP 1 Score: 72.4 bits (176), Expect = 1.4e-13 Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TAIR10
Match: AT4G06746.1 (AT4G06746.1 related to AP2 9) HSP 1 Score: 52.8 bits (125), Expect = 1.2e-07 Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TAIR10
Match: AT2G23340.1 (AT2G23340.1 DREB and EAR motif protein 3) HSP 1 Score: 51.2 bits (121), Expect = 3.4e-07 Identity = 36/98 (36.73%), Postives = 50/98 (51.02%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TAIR10
Match: AT3G50260.1 (AT3G50260.1 cooperatively regulated by ethylene and jasmonate 1) HSP 1 Score: 50.1 bits (118), Expect = 7.7e-07 Identity = 33/89 (37.08%), Postives = 47/89 (52.81%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. TAIR10
Match: AT5G67190.1 (AT5G67190.1 DREB and EAR motif protein 2) HSP 1 Score: 48.5 bits (114), Expect = 2.2e-06 Identity = 40/117 (34.19%), Postives = 51/117 (43.59%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. NCBI nr
Match: gi|659087715|ref|XP_008444599.1| (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo]) HSP 1 Score: 135.2 bits (339), Expect = 5.1e-29 Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. NCBI nr
Match: gi|449450247|ref|XP_004142875.1| (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis sativus]) HSP 1 Score: 132.5 bits (332), Expect = 3.3e-28 Identity = 67/77 (87.01%), Postives = 70/77 (90.91%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. NCBI nr
Match: gi|985560748|gb|AMD11605.1| (ERF11 [Betula platyphylla]) HSP 1 Score: 92.0 bits (227), Expect = 5.0e-16 Identity = 48/80 (60.00%), Postives = 61/80 (76.25%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. NCBI nr
Match: gi|449447039|ref|XP_004141277.1| (PREDICTED: ethylene-responsive transcription factor ERF011-like [Cucumis sativus]) HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13 Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 1
BLAST of CmaCh12G005630.1 vs. NCBI nr
Match: gi|659103341|ref|XP_008452588.1| (PREDICTED: ethylene-responsive transcription factor ERF011-like [Cucumis melo]) HSP 1 Score: 83.6 bits (205), Expect = 1.8e-13 Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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