CmaCh11G015740.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAGAAGATTCCATTATCAAAACAGGGAATTTTAGTTTCTATAATCTTTGTCGTTATAAACCCTAAATCCCTGTTCCCAATTCAGTCGATGTCCATGAATTCCTCGCAATTCACATTCATACGCAATTCTCTCCATGGAATCAGCCACTCAAATTGTTAAGAAAGAGCACAAAACCTTCTTTAGACGACGATTAACGCGAACGCCACCACTGCCGCCGCCACCGCCGCCTTCTCTTTCTTCATCCTCTTCGGTTCCTCTCAACCTAACTCCAGCCGCCAAGCCCGAAGCCCCTGGTCCGATAAAGAGAACTCGGGATTTGCCTGATTTTTCGGAATGTCATGCTTGTGGATTTCGTATTGACGTCGTTGACGGTCGTTCGAGGCTTAATTCCCTCTACAGCGAGTGGCGGATTGTTCTTCTTTGTAAGAAGTGCTTCTCTCTTGTCGAATCTTCTCAGGTTTGTTCTTACTGTTTTGCTGACTCCAGAGGCGATTCTTTTAGTTGTTGTGATTGTAACCGTCGGGTTCATACGGAATGTTTTGCTCAGTATAGTAGAGTTGCTCCTTGGTCGTATTCCTCTTCGGGTTCTGAGTTTTCTGTGTGTATTGATTGTTGGGTTCCTAAACCAATCGTCACTGCTAGGGCTATTTTGAAAAATAGGAAAATTAGGAGAAAGAATATCCATGCTTCGGATTTGCAGAGTTCTAAGGTTTCAACTAGCCGAGACTGCAAATCATTGACTGCAATACTGAAGGATTCAAATTGTTCGGTGGAGAAGAAAGGTAATGCTGCGGTTAGAGCTGAAGAACACGCGCTGAAAAAGACTGCTGTTGATAGGATGGGTTTTGAGTTGGCTAGCGACGCATTAAACTTGGTAGCCCAGAGGGATGAAAGCACTGCCAAAGAGTCTAGGGAATCTGCCGATGACGCCGAGTTGGCAATTGAGTTGCACCGAGCTATGAATAGTTCTCCAAGACTTTCCAAGAATTTTTGTTTGGTGAACTCGAACTACATGGCCTGTGAGAATGTGAGCGTAGACGATGGCAACACATCGATAGGAGCGCTGCATAGTAGGGAGTTCGATTTCCGTAAAACCCCTCGAGTTTTGATACATAACAATATATGCAACTCTCTTGATAAAGCTGCTTCTGAAGATCACATCGCACCATTAGAAATCAATCGAGAATCCATGGGTAACGATCCTATGCCTATAAAGGGTAATGCTTGCCAGGAGTTGCCATCAAAAGATGATTTGAGGAGCAGGTCAATTAAGTTAAGGAGTGCTGGTTGTGATCATCAACTGCCACACAAACAAGATAAGTCCGCTCTGCCCGGGGATGAGAGGTGCAGGTGCATTGCAAAGCCCTATCACTATTTCTTCAAGTATAGGAGAAGAGATACTACTAAACGATATTTGTTGAAGTATAGCAAGCGGAATTCAAAACTGAAGAGAACGCCTGATTGTAAACCTAACATTCTTGTTGATGGAACGTGCTTGGGTGTTCCATCATCATCTGCAGCAATTCTAATTAATACTGAGAAATTTCCAGTAGTTTCAAATTCCTCATTTGGCTGCCGTGACGTTCCTCTGCAATCATCTGGCCTGAATGCAGTTCAAGAAATCAGTAACCAAGGAGGAAGGTGAGCATCGTGCTTTTCTCTGCACCGTATTATTTAAGGTTCTCTTTATATATAAACTAACAACTTTTGGAGGTCGTATTTAGAAGGAAAAGTTCTTAGATATTGACTTGTTTGGTTTTAAGCTAGCACTAGTGGTGCATACTAGTTTTAAAGTGAGTTTTATCAGGGTAGATGTACTGTATTAACGTTTCACCTCATTCAATTTAAATGTGTTTCAATATATGTTTTACGTGTACTATCTGTATCATAAACAGTTAATTCTGGTGCAATGCGATGAGCTTACAGTACTCGTCCATTTACCACCAAAATCACCTTCAACCTCTTAGAGATTAGGGGCCATCCATAAGATTTATTGATATATCTTTCCCTACTCAATACAAGGGTTATTGCTTCTGTGATTTGTGCTCTACAATGTTTGTAATGTAGAAGAGTACCGTTGACAAGCTTGGGAAACTTTTACGTGTGCCCTAATCCAAGGAGATCTAACGCTTTCTCAATAATCAAACTTTGACCTATTAGTTTGGAGTTTCGAGTCAGTTTAGGTTAGCCCTTGGCGTACGAGTCCTTTTGATAACCCTAAATTTGGGACAAGATAAGATATTCCTATAGAGCTTTGCAGGCCGCCTTGCACTTTTTCCAAGTTGTAGTCTATATTTCCTCTTGAGTTTCTTAAAGAATATCAAATGCCTGTTGGCTGAGTTTGAGATGAACAAATTCACCACTTAATGACAAAGTTGAAGGAAAGAGATACAAAGTTGAAGGAAAATCTTTATTTCTAGAATTCTCTTTGAATTCACTTTCACAAAGGTTTCTGATCTCTCTATATCTACTGGATTAAGAAACTAGCTGTAACGACCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCTCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTACTAGGAGAAGGTTTCCACACCCTTATAAATGGTGTTTTGTTCTCCTCCCCAACCAATGTAGGACATCACAATCCACCCCCTTCAGGGTCTAGCATCCTTTCTGACACTCTTTCCTTCCTCCAATTGATGTAGGATCCCCGCCAAATCCACCCCCTTTGGGGCCCAGCGTTCGTATCGACCTAGATCCACCACTAACAGATATTGTCTTCTTTGGGTTTTCCCTTTCAAGATTCCTCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCTACACCCTTATAAATGGTGTTTTGTTCTCCTCCCCAACCAATGTTGGACATTACACTAGCTATAGTCGTTCCACTCGTTTTTGCATTTCTTCAATCTTGATATATTGGAAATTTCACTCTTGTGTACAATTTGGCAGTTACATAGACAAGAAACCATGGAAGAACCTAAGCTCCAATTCTAATTTGATCTTGGATAGGGTTATGGAAGTATGAAAAATTTTCAACAAGTGATTGATACCAAGACTCACATTTCAAAGGAAACTACCAAATTTCACAATCTGAAGAGTAAGAGATAGAGAGGTTGATCACTCACTATTCAGTGGAATCGACCATTGAGATTAAAGACTCATTTTTGAAGTTCTCTTCAGATGCTTTTTCACTTGGATGTCAAAAGGCTATAAATGGAGGGTGGGTATATATAGTCCACAATTTAAATGAGTTATTAGGCAAATATACTCTTCCAAATCATTAATGGAAGCCACAATTCACAATGTATGATTTCAATCTTATTGTTCGTAGGATGAGCTTATTATCCAAAGGTGTTTTCCATGTTTGGGTCTCAAATAAGTTAAGCAAAGAGAATGCTCCTTGGTAAAGCTTCTGTTAGTGTTTTCAAGTCCTTAGATAGGAGGTTATTTAAAGATTGGACGTACCTTTGCTATTATTTATCCTGATTTAGTGTCTTATTGTGCATGTGATTTGGTAAAAGGATTTTGAAGCTCTGCATTTTCTTGACAACGCTTATTATATAAAATAACCTTGACACCAAAGAAGTACTAAACAAAGCGATCTTTTTGCTTCCATTTTACTGTGGTGATGAATTTTTGTTGCCACTACTTTTGGGGATAGATTCTATAAGAGATTCAAAGGGAATTGATGGGAAGATTCAATAGTGCTTGCAATGACGTGAGATTTCCCAACATTTGAAGCTTAGATTTGGGAAATTCATAACCATTGACTAGGATTACGGTGCCAGTTACTAGCTAGCAAATTGTTTTGCATTCAAGCAGTATTCTTTTTGGGCCTATAATTCCAAGTTTCATCCTGATTTGGCAGTACTATTCTAAAACTTTATTTGGTTGCATCGTTTGAAAAATTATTTCTCATGGTATTCATAATTATTGGCTCCATCCATTAAGGTTTTTAATCAAATGTTGAACACGTGTTCGATTATTTTTATTTTGTTTGTTCAGATGCTCTTTCATCTGCTTGCTGCATAGTCCTTCCCTTTCATTCTACATTTATCTTGCCTATCTCACATTGCCCATCAGAAGAATTTTCATGTTGTTAAATATGCTCAGGGCATTTGGATGTTCTTGATAATGTGTTGCTGCTTATAAATTCATAAAACTGATATTAATTCATGTTTTCAAAGATGGGTTAGTGAGAAAAATGTTCGAAAAATGTTCGAAAATATCGTCTCCTCTGCTTTACAGATGTTGTAATCGTATGTTGCTCATATTGACAGGTAA GAAGAAGATTCCATTATCAAAACAGGGAATTTTAGTTTCTATAATCTTTGTCGTTATAAACCCTAAATCCCTGTTCCCAATTCAGTCGATGTCCATGAATTCCTCGCAATTCACATTCATACGCAATTCTCTCCATGGAATCAGCCACTCAAATTGTTAAGAAAGAGCACAAAACCTTCTTTAGACGACGATTAACGCGAACGCCACCACTGCCGCCGCCACCGCCGCCTTCTCTTTCTTCATCCTCTTCGGTTCCTCTCAACCTAACTCCAGCCGCCAAGCCCGAAGCCCCTGGTCCGATAAAGAGAACTCGGGATTTGCCTGATTTTTCGGAATGTCATGCTTGTGGATTTCGTATTGACGTCGTTGACGGTCGTTCGAGGCTTAATTCCCTCTACAGCGAGTGGCGGATTGTTCTTCTTTGTAAGAAGTGCTTCTCTCTTGTCGAATCTTCTCAGGTTTGTTCTTACTGTTTTGCTGACTCCAGAGGCGATTCTTTTAGTTGTTGTGATTGTAACCGTCGGGTTCATACGGAATGTTTTGCTCAGTATAGTAGAGTTGCTCCTTGGTCGTATTCCTCTTCGGGTTCTGAGTTTTCTGTGTGTATTGATTGTTGGGTTCCTAAACCAATCGTCACTGCTAGGGCTATTTTGAAAAATAGGAAAATTAGGAGAAAGAATATCCATGCTTCGGATTTGCAGAGTTCTAAGGTTTCAACTAGCCGAGACTGCAAATCATTGACTGCAATACTGAAGGATTCAAATTGTTCGGTGGAGAAGAAAGGTAATGCTGCGGTTAGAGCTGAAGAACACGCGCTGAAAAAGACTGCTGTTGATAGGATGGGTTTTGAGTTGGCTAGCGACGCATTAAACTTGGTAGCCCAGAGGGATGAAAGCACTGCCAAAGAGTCTAGGGAATCTGCCGATGACGCCGAGTTGGCAATTGAGTTGCACCGAGCTATGAATAGTTCTCCAAGACTTTCCAAGAATTTTTGTTTGGTGAACTCGAACTACATGGCCTGTGAGAATGTGAGCGTAGACGATGGCAACACATCGATAGGAGCGCTGCATAGTAGGGAGTTCGATTTCCGTAAAACCCCTCGAGTTTTGATACATAACAATATATGCAACTCTCTTGATAAAGCTGCTTCTGAAGATCACATCGCACCATTAGAAATCAATCGAGAATCCATGGGTAACGATCCTATGCCTATAAAGGGTAATGCTTGCCAGGAGTTGCCATCAAAAGATGATTTGAGGAGCAGGTCAATTAAGTTAAGGAGTGCTGGTTGTGATCATCAACTGCCACACAAACAAGATAAGTCCGCTCTGCCCGGGGATGAGAGGTGCAGGTGCATTGCAAAGCCCTATCACTATTTCTTCAAGTATAGGAGAAGAGATACTACTAAACGATATTTGTTGAAGTATAGCAAGCGGAATTCAAAACTGAAGAGAACGCCTGATTGTAAACCTAACATTCTTGTTGATGGAACGTGCTTGGGTGTTCCATCATCATCTGCAGCAATTCTAATTAATACTGAGAAATTTCCAGTAGTTTCAAATTCCTCATTTGGCTGCCGTGACGTTCCTCTGCAATCATCTGGCCTGAATGCAGTTCAAGAAATCAGTAACCAAGGAGGAAGGTAA ATGGAATCAGCCACTCAAATTGTTAAGAAAGAGCACAAAACCTTCTTTAGACGACGATTAACGCGAACGCCACCACTGCCGCCGCCACCGCCGCCTTCTCTTTCTTCATCCTCTTCGGTTCCTCTCAACCTAACTCCAGCCGCCAAGCCCGAAGCCCCTGGTCCGATAAAGAGAACTCGGGATTTGCCTGATTTTTCGGAATGTCATGCTTGTGGATTTCGTATTGACGTCGTTGACGGTCGTTCGAGGCTTAATTCCCTCTACAGCGAGTGGCGGATTGTTCTTCTTTGTAAGAAGTGCTTCTCTCTTGTCGAATCTTCTCAGGTTTGTTCTTACTGTTTTGCTGACTCCAGAGGCGATTCTTTTAGTTGTTGTGATTGTAACCGTCGGGTTCATACGGAATGTTTTGCTCAGTATAGTAGAGTTGCTCCTTGGTCGTATTCCTCTTCGGGTTCTGAGTTTTCTGTGTGTATTGATTGTTGGGTTCCTAAACCAATCGTCACTGCTAGGGCTATTTTGAAAAATAGGAAAATTAGGAGAAAGAATATCCATGCTTCGGATTTGCAGAGTTCTAAGGTTTCAACTAGCCGAGACTGCAAATCATTGACTGCAATACTGAAGGATTCAAATTGTTCGGTGGAGAAGAAAGGTAATGCTGCGGTTAGAGCTGAAGAACACGCGCTGAAAAAGACTGCTGTTGATAGGATGGGTTTTGAGTTGGCTAGCGACGCATTAAACTTGGTAGCCCAGAGGGATGAAAGCACTGCCAAAGAGTCTAGGGAATCTGCCGATGACGCCGAGTTGGCAATTGAGTTGCACCGAGCTATGAATAGTTCTCCAAGACTTTCCAAGAATTTTTGTTTGGTGAACTCGAACTACATGGCCTGTGAGAATGTGAGCGTAGACGATGGCAACACATCGATAGGAGCGCTGCATAGTAGGGAGTTCGATTTCCGTAAAACCCCTCGAGTTTTGATACATAACAATATATGCAACTCTCTTGATAAAGCTGCTTCTGAAGATCACATCGCACCATTAGAAATCAATCGAGAATCCATGGGTAACGATCCTATGCCTATAAAGGGTAATGCTTGCCAGGAGTTGCCATCAAAAGATGATTTGAGGAGCAGGTCAATTAAGTTAAGGAGTGCTGGTTGTGATCATCAACTGCCACACAAACAAGATAAGTCCGCTCTGCCCGGGGATGAGAGGTGCAGGTGCATTGCAAAGCCCTATCACTATTTCTTCAAGTATAGGAGAAGAGATACTACTAAACGATATTTGTTGAAGTATAGCAAGCGGAATTCAAAACTGAAGAGAACGCCTGATTGTAAACCTAACATTCTTGTTGATGGAACGTGCTTGGGTGTTCCATCATCATCTGCAGCAATTCTAATTAATACTGAGAAATTTCCAGTAGTTTCAAATTCCTCATTTGGCTGCCGTGACGTTCCTCTGCAATCATCTGGCCTGAATGCAGTTCAAGAAATCAGTAACCAAGGAGGAAGGTAA MESATQIVKKEHKTFFRRRLTRTPPLPPPPPPSLSSSSSVPLNLTPAAKPEAPGPIKRTRDLPDFSECHACGFRIDVVDGRSRLNSLYSEWRIVLLCKKCFSLVESSQVCSYCFADSRGDSFSCCDCNRRVHTECFAQYSRVAPWSYSSSGSEFSVCIDCWVPKPIVTARAILKNRKIRRKNIHASDLQSSKVSTSRDCKSLTAILKDSNCSVEKKGNAAVRAEEHALKKTAVDRMGFELASDALNLVAQRDESTAKESRESADDAELAIELHRAMNSSPRLSKNFCLVNSNYMACENVSVDDGNTSIGALHSREFDFRKTPRVLIHNNICNSLDKAASEDHIAPLEINRESMGNDPMPIKGNACQELPSKDDLRSRSIKLRSAGCDHQLPHKQDKSALPGDERCRCIAKPYHYFFKYRRRDTTKRYLLKYSKRNSKLKRTPDCKPNILVDGTCLGVPSSSAAILINTEKFPVVSNSSFGCRDVPLQSSGLNAVQEISNQGGR
BLAST of CmaCh11G015740.1 vs. TrEMBL
Match: A0A0A0K7C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230970 PE=4 SV=1) HSP 1 Score: 698.4 bits (1801), Expect = 6.6e-198 Identity = 375/530 (70.75%), Postives = 418/530 (78.87%), Query Frame = 1
BLAST of CmaCh11G015740.1 vs. TrEMBL
Match: A0A059AUD4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02697 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61 Identity = 132/257 (51.36%), Postives = 166/257 (64.59%), Query Frame = 1
BLAST of CmaCh11G015740.1 vs. TrEMBL
Match: A0A059ATF9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02697 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61 Identity = 132/257 (51.36%), Postives = 166/257 (64.59%), Query Frame = 1
BLAST of CmaCh11G015740.1 vs. TrEMBL
Match: A0A0B2RFX0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_005538 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 3.2e-59 Identity = 146/390 (37.44%), Postives = 211/390 (54.10%), Query Frame = 1
BLAST of CmaCh11G015740.1 vs. TrEMBL
Match: K7M9P6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G050700 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.1e-59 Identity = 164/462 (35.50%), Postives = 238/462 (51.52%), Query Frame = 1
BLAST of CmaCh11G015740.1 vs. NCBI nr
Match: gi|659092690|ref|XP_008447174.1| (PREDICTED: uncharacterized protein LOC103489686 isoform X2 [Cucumis melo]) HSP 1 Score: 705.7 bits (1820), Expect = 5.9e-200 Identity = 378/530 (71.32%), Postives = 420/530 (79.25%), Query Frame = 1
BLAST of CmaCh11G015740.1 vs. NCBI nr
Match: gi|659092688|ref|XP_008447173.1| (PREDICTED: uncharacterized protein LOC103489686 isoform X1 [Cucumis melo]) HSP 1 Score: 704.5 bits (1817), Expect = 1.3e-199 Identity = 377/530 (71.13%), Postives = 420/530 (79.25%), Query Frame = 1
BLAST of CmaCh11G015740.1 vs. NCBI nr
Match: gi|778725812|ref|XP_004139809.2| (PREDICTED: uncharacterized protein LOC101208216 isoform X2 [Cucumis sativus]) HSP 1 Score: 698.4 bits (1801), Expect = 9.4e-198 Identity = 375/530 (70.75%), Postives = 418/530 (78.87%), Query Frame = 1
BLAST of CmaCh11G015740.1 vs. NCBI nr
Match: gi|778725808|ref|XP_011659008.1| (PREDICTED: uncharacterized protein LOC101208216 isoform X1 [Cucumis sativus]) HSP 1 Score: 697.2 bits (1798), Expect = 2.1e-197 Identity = 374/530 (70.57%), Postives = 418/530 (78.87%), Query Frame = 1
BLAST of CmaCh11G015740.1 vs. NCBI nr
Match: gi|629090781|gb|KCW57034.1| (hypothetical protein EUGRSUZ_I02697 [Eucalyptus grandis]) HSP 1 Score: 245.4 bits (625), Expect = 2.2e-61 Identity = 132/257 (51.36%), Postives = 166/257 (64.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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