CmaCh09G000700.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATTCGGAGAATCCATTGGAAGAAAGAGGTGAGAGAGACGTAGAAATGAACACCACAGAATTGTGAGCCAAATTCCATTATTGAAACGCCCAAATCGTGAAGGACACAACATATTCATTCATACATGATCAACCCAAAAAGTCCCAAAGGATGAACGCCTACTCTCATTAGCCCTTTCCTCCTCCTCCTCCTCCCCCTCCTCCCCCTCCTCCCCCTCCCCCTTTCACCAACAATCCTCGAGTTCATGAACCGTTTCGAGCGCGCAATTTCCAAAAATGGTGGTATTGTTTGGATTTGATTGATTTCTTTCTTTTGTATATACGTATTATTCAATTCAACCAACGGACCATCTTTAACATCTTTGTTTCATTTTCAAACAACTTAGGAAGTCTCCAAGGGTTCGAACTCCCCACCAATCCTCAACAACTGCAAACCACTAAATCTCTGGGTATTGTCTTGCGAAATGCACAACAACTCCTCGGTGATTATGCCACATCCTCACTCCCTGTAAGTACTCTATTTATTCTTTTTTGCCCATAGATTTCTTAATTTAATAGTGGATAAACATGTAGCGCATTGCTGAGCGATTCGAGGAAGAAGGCTCTTCCACTGACCCCACAGTGAGGGGTCAAATACAAGAAGAGTTAGTACAAGTAGGTCTTAGGATGCAACAATTTGGAGCGCTTCTTCTCGACCTTGGCACTTCAATCTTGGCGCTCCGTTTGGAACAATCAACCGTAAGTTCTGTTTTTCTTTGTATGACATATGTAATTCAAATTAAGCTTCATTTTTTTTCTTTTTATATATAATACAGATTGACATCCAAGATGTTGGTCGAAGGGTTATTCGTAGCAATTCCCCAATGGATGTGTTTCGCGCTGTGGTAGAGAGTTCAGCTCAAATTTCTGGGAGTAGCAGTGAGGATATTGCTAATGAGTTGTGCAGCCACGACACACTTGCTCAGGTACTAATATTTTTCTTTTTAACTTTTCATTTTATGGATTTTGAGGTGTTCGTTTGTTGTGAACTTTTTTGCAGGAATATTTAGAGATGTTATCAAGTGATATAAACCGACGCTTACAAACCAATTCAGAACGCCAAGATTAATACATTTCTGGCAGATTTGTCAATGGGGGATTTAATATGTATTTCTTTTTATTATTATTAGCTTTCTCAAGCTTATTTTTGACATAATCTTTTTCCTTTTTCCCTTTTTCTTCCATGTGTATTCTCCTTATAAACGGATGCTGCTGCTCCTAAAGGCTTTATTTTATAATGCTTTAATTCTAGACTCTTTAGGCTGTAAAATACCATTCCTCTTATTTTATTTTATTTTTATTCTTCCATA TTTATTCGGAGAATCCATTGGAAGAAAGAGGTGAGAGAGACGTAGAAATGAACACCACAGAATTGTGAGCCAAATTCCATTATTGAAACGCCCAAATCGTGAAGGACACAACATATTCATTCATACATGATCAACCCAAAAAGTCCCAAAGGATGAACGCCTACTCTCATTAGCCCTTTCCTCCTCCTCCTCCTCCCCCTCCTCCCCCTCCTCCCCCTCCCCCTTTCACCAACAATCCTCGAGTTCATGAACCGTTTCGAGCGCGCAATTTCCAAAAATGGTGGAAGTCTCCAAGGGTTCGAACTCCCCACCAATCCTCAACAACTGCAAACCACTAAATCTCTGGGTATTGTCTTGCGAAATGCACAACAACTCCTCGGTGATTATGCCACATCCTCACTCCCTCGCATTGCTGAGCGATTCGAGGAAGAAGGCTCTTCCACTGACCCCACAGTGAGGGGTCAAATACAAGAAGAGTTAGTACAAGTAGGTCTTAGGATGCAACAATTTGGAGCGCTTCTTCTCGACCTTGGCACTTCAATCTTGGCGCTCCGTTTGGAACAATCAACCATTGACATCCAAGATGTTGGTCGAAGGGTTATTCGTAGCAATTCCCCAATGGATGTGTTTCGCGCTGTGGTAGAGAGTTCAGCTCAAATTTCTGGGAGTAGCAGTGAGGATATTGCTAATGAGTTGTGCAGCCACGACACACTTGCTCAGGAATATTTAGAGATGTTATCAAGTGATATAAACCGACGCTTACAAACCAATTCAGAACGCCAAGATTAATACATTTCTGGCAGATTTGTCAATGGGGGATTTAATATGTATTTCTTTTTATTATTATTAGCTTTCTCAAGCTTATTTTTGACATAATCTTTTTCCTTTTTCCCTTTTTCTTCCATGTGTATTCTCCTTATAAACGGATGCTGCTGCTCCTAAAGGCTTTATTTTATAATGCTTTAATTCTAGACTCTTTAGGCTGTAAAATACCATTCCTCTTATTTTATTTTATTTTTATTCTTCCATA ATGAACCGTTTCGAGCGCGCAATTTCCAAAAATGGTGGAAGTCTCCAAGGGTTCGAACTCCCCACCAATCCTCAACAACTGCAAACCACTAAATCTCTGGGTATTGTCTTGCGAAATGCACAACAACTCCTCGGTGATTATGCCACATCCTCACTCCCTCGCATTGCTGAGCGATTCGAGGAAGAAGGCTCTTCCACTGACCCCACAGTGAGGGGTCAAATACAAGAAGAGTTAGTACAAGTAGGTCTTAGGATGCAACAATTTGGAGCGCTTCTTCTCGACCTTGGCACTTCAATCTTGGCGCTCCGTTTGGAACAATCAACCATTGACATCCAAGATGTTGGTCGAAGGGTTATTCGTAGCAATTCCCCAATGGATGTGTTTCGCGCTGTGGTAGAGAGTTCAGCTCAAATTTCTGGGAGTAGCAGTGAGGATATTGCTAATGAGTTGTGCAGCCACGACACACTTGCTCAGGAATATTTAGAGATGTTATCAAGTGATATAAACCGACGCTTACAAACCAATTCAGAACGCCAAGATTAA MNRFERAISKNGGSLQGFELPTNPQQLQTTKSLGIVLRNAQQLLGDYATSSLPRIAERFEEEGSSTDPTVRGQIQEELVQVGLRMQQFGALLLDLGTSILALRLEQSTIDIQDVGRRVIRSNSPMDVFRAVVESSAQISGSSSEDIANELCSHDTLAQEYLEMLSSDINRRLQTNSERQD
BLAST of CmaCh09G000700.1 vs. TrEMBL
Match: A0A0A0L4G3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653430 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 8.1e-66 Identity = 135/182 (74.18%), Postives = 165/182 (90.66%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. TrEMBL
Match: A0A0A0L194_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653440 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 6.9e-33 Identity = 79/110 (71.82%), Postives = 90/110 (81.82%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. TrEMBL
Match: M5Y431_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000989mg PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 8.8e-20 Identity = 67/155 (43.23%), Postives = 97/155 (62.58%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. TrEMBL
Match: R0GNV2_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10025849mg PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.3e-19 Identity = 60/117 (51.28%), Postives = 78/117 (66.67%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. TrEMBL
Match: R0EUR7_9BRAS (Uncharacterized protein (Fragment) OS=Capsella rubella GN=CARUB_v10025849mg PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.3e-19 Identity = 59/113 (52.21%), Postives = 75/113 (66.37%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. TAIR10
Match: AT5G42220.1 (AT5G42220.1 Ubiquitin-like superfamily protein) HSP 1 Score: 100.9 bits (250), Expect = 8.4e-22 Identity = 59/117 (50.43%), Postives = 74/117 (63.25%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. NCBI nr
Match: gi|659104389|ref|XP_008452929.1| (PREDICTED: uncharacterized protein LOC103493795 isoform X1 [Cucumis melo]) HSP 1 Score: 263.8 bits (673), Expect = 2.1e-67 Identity = 138/182 (75.82%), Postives = 162/182 (89.01%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. NCBI nr
Match: gi|778697104|ref|XP_011654258.1| (PREDICTED: uncharacterized protein LOC101215937 isoform X1 [Cucumis sativus]) HSP 1 Score: 261.5 bits (667), Expect = 1.1e-66 Identity = 135/182 (74.18%), Postives = 163/182 (89.56%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. NCBI nr
Match: gi|659104393|ref|XP_008452932.1| (PREDICTED: uncharacterized protein LOC103493795 isoform X2 [Cucumis melo]) HSP 1 Score: 260.4 bits (664), Expect = 2.3e-66 Identity = 138/182 (75.82%), Postives = 164/182 (90.11%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. NCBI nr
Match: gi|778697108|ref|XP_011654259.1| (PREDICTED: uncharacterized protein LOC101215937 isoform X2 [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65 Identity = 135/182 (74.18%), Postives = 165/182 (90.66%), Query Frame = 1
BLAST of CmaCh09G000700.1 vs. NCBI nr
Match: gi|778697114|ref|XP_011654261.1| (PREDICTED: large proline-rich protein BAG6 isoform X2 [Cucumis sativus]) HSP 1 Score: 148.7 bits (374), Expect = 1.0e-32 Identity = 79/110 (71.82%), Postives = 90/110 (81.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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