CmaCh06G005730.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACGCGCCGTTGGATTTAGCCCAATTTTGTCTGCTCCAGTCATTACTCAAAACCTAAGACTAAACCAGAGAATTTGTTGCGGAACCAAACGAAAATCTCCCGAGCGAGTTTCAATTCACTATGGGTACTAGAGAGGTCTACGAACAGAAGCTAAGAAGGGGCAATCTCTACCATGAACCCACCATGAATCCAGGCCTCGGATCCCCTCGTTGTCCTCGCTGTTTCTCTCTTCTTAAACCCGATCCTGTATTTTTCTCCTCCTCTTCTATTTTAATCAGCATCTTATAGTTTCTATTCTGGAATTCATGTTTGATTTTGGCGTGTTTTCTGCTGTTGATTCAGGATACAAGTGAATGGGCCATAAATCCTGTTCTCCATAGTACCACCGCAGTGGTGAGTTCCTCCTCTCTTTCTAATTTTCCCTTTTTGATTTCTTCTTGAAATTTTTTAATGCTTCTAGGTTTTTGATTCTCCAGCGATAAATTTGTACTCTATGTTGTGTTCTGTAAGTTAATCTGCTGTTGGATAGTTGATGAACGTTTCTGGATCAACAATTTCGAAGTTGAATTCTATCCATTTCCTCCTATTATCAATTGGATTATCGTAAAAGATAATAGGAAAGAAGTTTATGAATGCTTTTGTCATAAACATTGTAGTTTCCATGGCTTTTGCATATTCTTATACTGCCTTGTTCGACAGGCAGGATCAGGTCTTGGAGGGTTGCTTAGTGCAGTTCATGCTTTCAATACGGGTAATCATAATGAACTTTCATAAATGTTTCATTTGATTTTCACAATTGCTTATCGTTTACTTTCATTACAGGGATCCCACACCTTCAAAATCATGTCAAGGGACCAAAGTGGCTTCCCTTTTTAATTGGGGTATGCCTTCTTATTAAATTATGAAGTTGATTTTGTTTTTGTTGCTAATTATCATTGGAGTTGCGTGGATTACTTGATTCTTGTGAGTTGTGTTCCATCAACTGTTTACATGACTTCCTTGTCTCTTTGTTGATAGGTGCCTGTCCTGTTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTATGTTAGCAGATTGTCTTTGCTTATTCTCTCTTTGAGAAAACATTGATGTTTCTTTGGTCGGTTGTTTTTCATTTATTTTAAAACAAAAAATTGATTACTGCGTTGAAATACATGAATAAGGGAAGGATTAGAACCTACCTAGGAACTTTGAATATGCCTCTCCACCTGAAAACTGGAAAAGAAGCTTGGAATTCCATCACTCTATCATGGGGCCTTGGCTTCATCAGGTTTTTATCTTTTTGATGGTTGACCTTTTGTCTTAGAGATGATTTAGTGAATTTGTGACTCTCAAGTGAAAAGAATGTTTGCCCACTAACTAGATGCTCGTTCGCGTATCACTCGTACTTGGGTGACATGCCTTCTACAACTGTCACCTTAAAGTGAATGAGAAGGTTGTCGTGTCTGAATCCATTTTACCTCTTCAAAACTGTAACAGCCCTAGCCCACCGCTAGCCGATATTGTCCTCTTTCGGTTTTCCCTTTCGGTTTTCCCTTTCGGGCTTTCCTCAAGGTTTTTAAAATGCGTATGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATGCTCGTTCCCCTCTCCAATCGATGTGGGATCTCACAGTCCACCCCCCTTCGGGGCCCAGCATCCTCGCTGGCACACCGCTCGGTGTCTGATTTTGATACCATTTGTAACAGCCCAAGTTCACCGCTAGCAGATATTGCCCTTTTTGGGCTTCCCCCTTTCAAGCTTCCCCTTAAGGTTTTTAAAATGTGTAGGCTAGAGAGAGGTTTTCACACCCTGTAAAAAATCCTTCATTCCCCTCTCTAACCGATGTGGGATCTCACAATCCACCCACCTTCGGGGCTTAGTGTCCTCGTTGGTACGCCGCCTGGAGTCCACCCCCTTCGGGGCTTAGCATCCTTGTGGCATACTGTCCAGTCTCTGACTCTGATATCATTTGTAACAGCTAAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTTCCTTTCGGGTTTCCCCTCAAGATTTTTAAAACGCGTATGCTATGGAGAGGTTTCCACACCTTTATAAAGAATGTTTCGTTCCCCTTTCCAACCGATGTGGGATCTCACAAAAACACTAATGATAGGTCAAATACATTAGTTGCACCGCGCTAACATGTTAGTATTTTCTGATGCAAGTACATACGAATGAGTTTAGAATGAGACACTAACACATTGAGTAGTCTTCCTCCTTCCTTTTTCAGCCCAATGAAAACAAAATCATTATATTAGGATGATTATAATGAAAGAAAGATTTCATGCCATTACCATAAAACTTGTTTAATTTTTAATCTCACTAGTATCACCGTAGTTGAGCAAAAGAAAAATCCATTGATTTGTAAATCAATGAAACTTTAACTCACACATCAAATCATTTTTTAAGACACTAATCAATTTCTTTGTTGCTTATTAACTGTGCAGGTTTTGTTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCCAGTGCTTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAAGAGAATCACATGTCTCGAACTCGGGCTCAATGA AACGCGCCGTTGGATTTAGCCCAATTTTGTCTGCTCCAGTCATTACTCAAAACCTAAGACTAAACCAGAGAATTTGTTGCGGAACCAAACGAAAATCTCCCGAGCGAGTTTCAATTCACTATGGGTACTAGAGAGGTCTACGAACAGAAGCTAAGAAGGGGCAATCTCTACCATGAACCCACCATGAATCCAGGCCTCGGATCCCCTCGTTGTCCTCGCTGTTTCTCTCTTCTTAAACCCGATCCTGATACAAGTGAATGGGCCATAAATCCTGTTCTCCATAGTACCACCGCAGTGGCAGGATCAGGTCTTGGAGGGTTGCTTAGTGCAGTTCATGCTTTCAATACGGGGATCCCACACCTTCAAAATCATGTCAAGGGACCAAAGTGGCTTCCCTTTTTAATTGGGGTGCCTGTCCTGTTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTTTTGTTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCCAGTGCTTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAAGAGAATCACATGTCTCGAACTCGGGCTCAATGA ATGGGTACTAGAGAGGTCTACGAACAGAAGCTAAGAAGGGGCAATCTCTACCATGAACCCACCATGAATCCAGGCCTCGGATCCCCTCGTTGTCCTCGCTGTTTCTCTCTTCTTAAACCCGATCCTGATACAAGTGAATGGGCCATAAATCCTGTTCTCCATAGTACCACCGCAGTGGCAGGATCAGGTCTTGGAGGGTTGCTTAGTGCAGTTCATGCTTTCAATACGGGGATCCCACACCTTCAAAATCATGTCAAGGGACCAAAGTGGCTTCCCTTTTTAATTGGGGTGCCTGTCCTGTTATTGTGTTCTGGTGCCGGTGCTGCATTTGGAGGTTTTGTTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCCAGTGCTTCCCATTATGGAGTTTCGCTTCTCACTCGAAGAATTGAAGAGAATCACATGTCTCGAACTCGGGCTCAATGA MGTREVYEQKLRRGNLYHEPTMNPGLGSPRCPRCFSLLKPDPDTSEWAINPVLHSTTAVAGSGLGGLLSAVHAFNTGIPHLQNHVKGPKWLPFLIGVPVLLLCSGAGAAFGGFVLPRFTQLTVTSYYATSSASHYGVSLLTRRIEENHMSRTRAQ
BLAST of CmaCh06G005730.1 vs. TrEMBL
Match: A0A0A0LEC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G798610 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.0e-77 Identity = 140/152 (92.11%), Postives = 144/152 (94.74%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. TrEMBL
Match: M5WAS7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012706mg PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 6.5e-64 Identity = 118/155 (76.13%), Postives = 131/155 (84.52%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. TrEMBL
Match: K7LD29_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G107200 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.0e-61 Identity = 111/153 (72.55%), Postives = 131/153 (85.62%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. TrEMBL
Match: A0A0B2SP47_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046869 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 1.0e-61 Identity = 111/153 (72.55%), Postives = 131/153 (85.62%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. TrEMBL
Match: V7BIK2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G261600g PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 1.4e-61 Identity = 110/155 (70.97%), Postives = 131/155 (84.52%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. TAIR10
Match: AT2G41945.3 (AT2G41945.3 unknown protein) HSP 1 Score: 197.6 bits (501), Expect = 5.7e-51 Identity = 106/193 (54.92%), Postives = 124/193 (64.25%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. TAIR10
Match: AT5G18250.1 (AT5G18250.1 unknown protein) HSP 1 Score: 78.6 bits (192), Expect = 3.8e-15 Identity = 37/104 (35.58%), Postives = 58/104 (55.77%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. TAIR10
Match: AT3G04040.1 (AT3G04040.1 unknown protein) HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14 Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. NCBI nr
Match: gi|778684697|ref|XP_011652076.1| (PREDICTED: uncharacterized protein LOC101220824 [Cucumis sativus]) HSP 1 Score: 297.4 bits (760), Expect = 1.5e-77 Identity = 140/152 (92.11%), Postives = 144/152 (94.74%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. NCBI nr
Match: gi|659084686|ref|XP_008443017.1| (PREDICTED: uncharacterized protein LOC103486742 [Cucumis melo]) HSP 1 Score: 290.0 bits (741), Expect = 2.4e-75 Identity = 136/153 (88.89%), Postives = 144/153 (94.12%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. NCBI nr
Match: gi|645271997|ref|XP_008241182.1| (PREDICTED: uncharacterized protein LOC103339628 [Prunus mume]) HSP 1 Score: 255.4 bits (651), Expect = 6.5e-65 Identity = 119/155 (76.77%), Postives = 133/155 (85.81%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. NCBI nr
Match: gi|694429845|ref|XP_009342430.1| (PREDICTED: uncharacterized protein LOC103934416 [Pyrus x bretschneideri]) HSP 1 Score: 253.1 bits (645), Expect = 3.2e-64 Identity = 116/155 (74.84%), Postives = 135/155 (87.10%), Query Frame = 1
BLAST of CmaCh06G005730.1 vs. NCBI nr
Match: gi|694412603|ref|XP_009334611.1| (PREDICTED: uncharacterized protein LOC103927415 isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 252.3 bits (643), Expect = 5.5e-64 Identity = 117/155 (75.48%), Postives = 133/155 (85.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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