CmaCh05G002560.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAACGGTGAGTTGCATTAATTTGCGCTTGTAGCATGTAAGACCCAGGCGACTAAAACGCAGCGTTTCGGAAGATCGATTTCCAAATTACCCTATTGCTGCGATCCCATTTCTTTCTCGTTCCATTTCTGAGTACAAGAAGCCCAAAAGCTCCTAGTGATTTGGTTGGCTCTGAATAGCGCGAAGTCAGAGAGGAGGAGGAAGAAGAAGACGATGGGAACTCTGGGGAAAGCCATTTACACCGTTGGATTTTGGATCCGTGAGACGGGTCAGGCAATCGATCGTCTTGGCTGCCGCCTCCAAGGGAGATATTTCTTCCAAGAACAGCGTAAGCAATTTATTGTTATTGTTTTTTGACATAGCACGTTCCTATAGTCTCGGATCTTTCTCCTTTAATTTTGACTTTCATCCAGGTATGTTTTAGGAGTCTCGTTATCCTGATTGGATCAGCTTGTCGGAATGCTAATTGATGTTCTCTGAATTTGATTGATGAAAAGTGTTTGTCGTGGTAAATACAGCTTATGCGTCGCGTAGTTTGTGTGGTTATGCCAGAGTTCCCATTGATTCTCAATTTTTGAGTGGCTGAGGTTTCGAGTATTAGGGTTACGGATTTACACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGATTTTTATTAGAATTGTTGTTGGCGGTATACGAAGCAACGTATGACGAATGCTTCTATAATTTTATAAGAGGGTGTCAAATGCGGGCAAACGATATTTACTGGGATATAATGGAATTCTTAATTACAAATGCAGGTGTACTTTGGGAGTAATAGTTTTAGTGATATGACTCACTTGGGTATTTCAAAGTGTGATTGTTGATGGCACTGTCACTGAAACACACCTCTTGTTAGATTTGCTTCATTTTCTGTTTGTTGTGGTATTTTAATTTGGTTATGAGCTCCCTTTTCGTGTTCTATCTCATTGATGATACCTGATGGACTAATATGTCTGAGGTTTCCTGCAGTGTCGAGGCATCGTACTCTGATGAACATATTTGATAAGGCACCTGTTGTTGACAAGGACGTATTCGTAGCTCCAGGTGCATCCATTATTGGGGACGTTCAAGTTGGAAGAGGATCTTCTATTTGGTATGGGTGCGTTTTGAGAGGTAAAACCCATGTGAAGGACTCTTTTGTTGTTACGGTATTTCCTAGTCCATTTGTGCACATTTAACCTTGTCGGTACATGCCTTGAAAGTTTGGACTCTCTAAAATTTTCGTCCATTTTAAACCTCTTCAAGCTATTGTAACAACACTACTTACCTAACAATTTCACTAATGAAATACATGCCCTTTCAATATCCCAATAACAACTCGGATATTACTCATACTAATATTCCTTCCTTGATGCGAAGGTTTTTGTAAAAACTAATGTAATTAGAGTTTGTGTTATTTGATGTGTTTGATATTTTTATGGCATGTTAAAAAAATATTTTTCTGTTTGTTCTCTTTATTAATAAATTGCAATGTTATCCAGAGTGCCTCTCCGTATCTGTTGACATTTCAACTATCATTAGCCCACTTCGGTTGCGCATTCTAAATGCTTTAAATATCTGTGGCTTTGTCTTTTCCTGTCAAAAAAATAATTACTTGCTGGTGCTTCATCGCTAGCTCTTGCATTCCTTTTTCACCTTGACCTTGACACTTGATGTTTGGTCAACTTAGGATCCGTTGGGGAGAATAGTTTAGAATTTATTATATTTTATTGTTCACATATATAACTCCTTTGGTAGGATCATTTTTAAAAGTAGTTTTTAGTTTAAAAACTTTAAAAAAATAATAGTATTTTGTTATTTTCGTGTGTTTTCATTTTTGTATTCTTTGTTAAATTTTATGTTTATATATGGTCATTAAGAATATAGAAGACTCTCTCCTTCTTGGAGTGCCCCATCGCTTATGCTACAAACATATAGAAGACTCGTACCATGTGTTTTCCTCCATTTGGAGAGGGTCTTTGGTTTAAGTTGGTGTGTTCAGGAAGATTTTCACTATTCTTTATCATCTATTGACTTTGGAATGTGTAGTGAAAGTGGCTCCTTGGAGGAGGCTTTGGCTAGAGAGGAATGCTCAATTGTTTCAGGGAAAACTACTAATTTTTCTGAGCTTAGGAGATGATGAGATTTAATTGTGCTCTTGATGCTGTAAATCAAAAAAAAATTGTTCTTATTTTCCTCTTTTAAGATTCGGAAAAGTTTTTTGTCATCTCCTTCAGTTTTTGTAGGTTGGGAGAATGTCTTAGTTTCCCTTGTAGTTCTGTTTACTCTTATTTATTATTTTTAGGAAAGTTACTCTAAATAGAAAAAATTGTCAACTGTTTTATATTTTGGTTTTTTTAATTTGTTTGAAAAAATAAACTTTGCAAACTGGTTGTCCTAGGAGAGATCCATTTTTTAAGAACAGCAAATCATTTTAAACATAATCTTTACAGAAAACCATTGTTTCTTTTTTTCTCATTAAAATGTCTGAAATTGACAATCTGTAAAACAGTATCAAACTTAAATTAAAATAGTTATTTAATTCATATCATGTTTGGCTTGTTAGCCAATGACATTACTTGAACATTTTCTTTGTAAGTTTTGTTTCATAACTTAATTATCTATTTGACTAGGTGATGTGAACAGCATCAGTGTGGGATCTGGAACCAACATACAGGACAACTCCCTAGTGCATGTGGCAAAATCTAATCTAAGTGGAAAGGTTTTGCCGACTATCATTGGCAACAATGTCACCGTAGGTGTGTGTGCTACGTCATCTTAGCTGTAGCCAAATAATATATTTATGTCTGATCTTTTGTTCAGTATACTGTGAGCAACTGAGCATGCTGAGGTTGTACATGTTAATTATTTTCAAGTTTTCTTACTTAAAAAAAAAGTTCAAACCTGACAGGTCACAGTGCCGTATTACATGGCTGCACCGTTGAGGATGAGGCTTTTGTTGGCATGGGTGCAACATTGCTTGATGGTGTTGTTGTTGAGAAAAATGCCATGGTAGCTGCTGGAGCTCTTGTGAGGCAGAATACTAAGATCCCCTCTGGAGAGGTACTTCTCAAGACTTTTTTTTAAAAGAAAAAGAGTCGAAAATTTTTCATTAAAAAAAAAAAGAAAAAGAAAAAGTGAGACGTGTGTTCTTAGGCCAAGGTAGGAGAGGTCTCCTGCAAAGTGGTTACAAAAAAGCAACCCTAAATAAGGTTGATCAAGAAACTACGAAATTACAAAGACTTGTGAAGGACACTCCAACATGAAGCTTTAGGCTGTAAGCTGGACTCAGCCTAAAGATTTTTGTTCGTCATCGTACAGACTAGCATTCTTTTCTATCCAATCGAACCACAAAAGAAGCTCTAATTGTACTATTCAATAGTACTTCAGCTTTGTTGCTTAGCCACCTATCGTTGATAGTTTTCATTAGCCACTCTGATGTCTACACAGAAAGCCTCTCCAAATGTAGAAAGAAGGTGCCACTCATTCATTGTTTCCTCATCTCTTTTATATAGAGCACAAACTTTAGGCAACATGCAATTATATAAGGATTCTGTCTTTGAGTCCTATCATGCATATTTAAACTCTTGTAAGTCACAGACCAAAGGTAGAGTTGACACATTGGGATCCTTGCTATTCACAATAAATTTAGTGTGAGAAGAGTTTAAATTTAGGCGTTGCAAATCAAATCAAGGTTCTCTATCAGGGCCAAATCTTACTGTTTCTATTGAGGCAAAAAGTTCATCTTTTTCACCCAAAAAATCTTGATCTGTTGAGGCAAAAAGTTCATCTTTTTCAGGGCCAAATCTTACTGTTTCTAACTTCTCTATTGGGAAAATCCAATTCCTACTCTCTATCAAAAAGATCCGGCCTTAAATCCCAAACTGGAATATGGGAATTCCATTCCTCTTTGATCAATACCTTTTAGTGGATATCTTGAAATAATTTGGTTACCCTGGATACTAATTCTGAATGATAATCTGCTCTGAACTTGCATTGGAGCATGGACTTGGGCTTCTATGTTAGCTTTATGGGGACATGGGTAGTGAGCTTTACCACAATGTTTATGTGCAGGTATGGGGAGGGAATCCAGCGAAATTCCTCCGAAAGCTCACTGATGAAGAGATAGCTTTTATATCTCAGTCGGCCACCAATTACTTAAACCTTGCACAGGTTCACGCAGCTGAAAATGCAAAGTCTTTCGAGGAAATTGAGTTTGAGAAGGTGCTCCGCAAGAAGTTTGCTCGCAAGGACGAAGAATATGACTCGATGCTCGGTGTTGTTCGTGAAACACCCCCTGAACTCATCCTTCCCGACAACATCTTACCCAATAAAGATCCCAAGCCTTTGCAGAAATAAAACCACCCATCCTTTGTTCAATCTTGATTTGTTTAGCTGAGGAGTATTTTGGCATCATATGCAAAAATACATCAAAAAAGAGTTTGTGTACTTCCAGAATAATATCGATCATCTTCTACCGCAGAATTATGGCATCCATTTTGGCTGTTGGGACTATTCTTCTGGCAGCATTTTAGAATTGGTGTTTTACTGCTCAGGATGAAACTGACTTCATAAAAGTAGATTGTAAGTTTGTTCATCTTCTGTATTGAAGCTCCAATTTTCGTTCCTTTTCCCACTCATTTTGCTGATATTTGAAGCATTTGATGTCAAAAGACTGTCTGAAAGTGACTCCTAAAGTGGTGTGAAAGCCGCTGAGGGCTAATCTCCCTCCTCTGTATGTTTTAAGTCCTTTGGATTCTTCGGACATTTACATTATAATTGGGAGTCTGAATATTTGATACAGGTTGAGGCTTTAATGATATTGGACAAGCAGATGATAGAACATTTTTAAATTTCA TAACGGTGAGTTGCATTAATTTGCGCTTGTAGCATGTAAGACCCAGGCGACTAAAACGCAGCGTTTCGGAAGATCGATTTCCAAATTACCCTATTGCTGCGATCCCATTTCTTTCTCGTTCCATTTCTGAGTACAAGAAGCCCAAAAGCTCCTAGTGATTTGGTTGGCTCTGAATAGCGCGAAGTCAGAGAGGAGGAGGAAGAAGAAGACGATGGGAACTCTGGGGAAAGCCATTTACACCGTTGGATTTTGGATCCGTGAGACGGGTCAGGCAATCGATCGTCTTGGCTGCCGCCTCCAAGGGAGATATTTCTTCCAAGAACAGCTGTCGAGGCATCGTACTCTGATGAACATATTTGATAAGGCACCTGTTGTTGACAAGGACGTATTCGTAGCTCCAGGTGCATCCATTATTGGGGACGTTCAAGTTGGAAGAGGATCTTCTATTTGGTATGGGTGCGTTTTGAGAGGTGATGTGAACAGCATCAGTGTGGGATCTGGAACCAACATACAGGACAACTCCCTAGTGCATGTGGCAAAATCTAATCTAAGTGGAAAGGTTTTGCCGACTATCATTGGCAACAATGTCACCGTAGGTCACAGTGCCGTATTACATGGCTGCACCGTTGAGGATGAGGCTTTTGTTGGCATGGGTGCAACATTGCTTGATGGTGTTGTTGTTGAGAAAAATGCCATGGTAGCTGCTGGAGCTCTTGTGAGGCAGAATACTAAGATCCCCTCTGGAGAGGTATGGGGAGGGAATCCAGCGAAATTCCTCCGAAAGCTCACTGATGAAGAGATAGCTTTTATATCTCAGTCGGCCACCAATTACTTAAACCTTGCACAGGTTCACGCAGCTGAAAATGCAAAGTCTTTCGAGGAAATTGAGTTTGAGAAGGTGCTCCGCAAGAAGTTTGCTCGCAAGGACGAAGAATATGACTCGATGCTCGGTGTTGTTCGTGAAACACCCCCTGAACTCATCCTTCCCGACAACATCTTACCCAATAAAGATCCCAAGCCTTTGCAGAAATAAAACCACCCATCCTTTGTTCAATCTTGATTTGTTTAGCTGAGGAGTATTTTGGCATCATATGCAAAAATACATCAAAAAAGAGTTTGTGTACTTCCAGAATAATATCGATCATCTTCTACCGCAGAATTATGGCATCCATTTTGGCTGTTGGGACTATTCTTCTGGCAGCATTTTAGAATTGGTGTTTTACTGCTCAGGATGAAACTGACTTCATAAAAGTAGATTGTAAGTTTGTTCATCTTCTGTATTGAAGCTCCAATTTTCGTTCCTTTTCCCACTCATTTTGCTGATATTTGAAGCATTTGATGTCAAAAGACTGTCTGAAAGTGACTCCTAAAGTGGTGTGAAAGCCGCTGAGGGCTAATCTCCCTCCTCTGTATGTTTTAAGTCCTTTGGATTCTTCGGACATTTACATTATAATTGGGAGTCTGAATATTTGATACAGGTTGAGGCTTTAATGATATTGGACAAGCAGATGATAGAACATTTTTAAATTTCA ATGGGAACTCTGGGGAAAGCCATTTACACCGTTGGATTTTGGATCCGTGAGACGGGTCAGGCAATCGATCGTCTTGGCTGCCGCCTCCAAGGGAGATATTTCTTCCAAGAACAGCTGTCGAGGCATCGTACTCTGATGAACATATTTGATAAGGCACCTGTTGTTGACAAGGACGTATTCGTAGCTCCAGGTGCATCCATTATTGGGGACGTTCAAGTTGGAAGAGGATCTTCTATTTGGTATGGGTGCGTTTTGAGAGGTGATGTGAACAGCATCAGTGTGGGATCTGGAACCAACATACAGGACAACTCCCTAGTGCATGTGGCAAAATCTAATCTAAGTGGAAAGGTTTTGCCGACTATCATTGGCAACAATGTCACCGTAGGTCACAGTGCCGTATTACATGGCTGCACCGTTGAGGATGAGGCTTTTGTTGGCATGGGTGCAACATTGCTTGATGGTGTTGTTGTTGAGAAAAATGCCATGGTAGCTGCTGGAGCTCTTGTGAGGCAGAATACTAAGATCCCCTCTGGAGAGGTATGGGGAGGGAATCCAGCGAAATTCCTCCGAAAGCTCACTGATGAAGAGATAGCTTTTATATCTCAGTCGGCCACCAATTACTTAAACCTTGCACAGGTTCACGCAGCTGAAAATGCAAAGTCTTTCGAGGAAATTGAGTTTGAGAAGGTGCTCCGCAAGAAGTTTGCTCGCAAGGACGAAGAATATGACTCGATGCTCGGTGTTGTTCGTGAAACACCCCCTGAACTCATCCTTCCCGACAACATCTTACCCAATAAAGATCCCAAGCCTTTGCAGAAATAA MGTLGKAIYTVGFWIRETGQAIDRLGCRLQGRYFFQEQLSRHRTLMNIFDKAPVVDKDVFVAPGASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGNNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVEKNAMVAAGALVRQNTKIPSGEVWGGNPAKFLRKLTDEEIAFISQSATNYLNLAQVHAAENAKSFEEIEFEKVLRKKFARKDEEYDSMLGVVRETPPELILPDNILPNKDPKPLQK
BLAST of CmaCh05G002560.1 vs. Swiss-Prot
Match: GCA1_ARATH (Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana GN=GAMMACA1 PE=1 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 5.4e-131 Identity = 228/269 (84.76%), Postives = 251/269 (93.31%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. Swiss-Prot
Match: GCA2_ARATH (Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana GN=GAMMACA2 PE=1 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 1.8e-126 Identity = 216/268 (80.60%), Postives = 251/268 (93.66%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. Swiss-Prot
Match: GCA3_ARATH (Gamma carbonic anhydrase 3, mitochondrial OS=Arabidopsis thaliana GN=GAMMACA3 PE=1 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 6.4e-108 Identity = 194/262 (74.05%), Postives = 223/262 (85.11%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. Swiss-Prot
Match: Y2881_DICDI (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum GN=DDB_G0288155 PE=1 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.4e-46 Identity = 96/236 (40.68%), Postives = 149/236 (63.14%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. Swiss-Prot
Match: Y304_METJA (Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0304 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.0e-33 Identity = 71/159 (44.65%), Postives = 107/159 (67.30%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TrEMBL
Match: A0A0A0LRI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361800 PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 1.1e-146 Identity = 262/273 (95.97%), Postives = 271/273 (99.27%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TrEMBL
Match: A0A059BQC4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01883 PE=4 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 9.9e-140 Identity = 249/273 (91.21%), Postives = 263/273 (96.34%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TrEMBL
Match: A0A068U0D0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037197001 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 8.4e-139 Identity = 248/269 (92.19%), Postives = 260/269 (96.65%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TrEMBL
Match: W9RQB8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009014 PE=4 SV=1) HSP 1 Score: 501.1 bits (1289), Expect = 8.4e-139 Identity = 248/269 (92.19%), Postives = 260/269 (96.65%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TrEMBL
Match: A0A0D2M4R1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G126800 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 1.4e-138 Identity = 247/273 (90.48%), Postives = 264/273 (96.70%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TAIR10
Match: AT1G19580.1 (AT1G19580.1 gamma carbonic anhydrase 1) HSP 1 Score: 468.4 bits (1204), Expect = 3.0e-132 Identity = 228/269 (84.76%), Postives = 251/269 (93.31%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TAIR10
Match: AT1G47260.1 (AT1G47260.1 gamma carbonic anhydrase 2) HSP 1 Score: 453.4 bits (1165), Expect = 1.0e-127 Identity = 216/268 (80.60%), Postives = 251/268 (93.66%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TAIR10
Match: AT5G66510.2 (AT5G66510.2 gamma carbonic anhydrase 3) HSP 1 Score: 383.3 bits (983), Expect = 1.3e-106 Identity = 194/273 (71.06%), Postives = 223/273 (81.68%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TAIR10
Match: AT3G48680.1 (AT3G48680.1 gamma carbonic anhydrase-like 2) HSP 1 Score: 134.4 bits (337), Expect = 1.0e-31 Identity = 69/165 (41.82%), Postives = 105/165 (63.64%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. TAIR10
Match: AT5G63510.2 (AT5G63510.2 gamma carbonic anhydrase like 1) HSP 1 Score: 114.0 bits (284), Expect = 1.5e-25 Identity = 73/192 (38.02%), Postives = 105/192 (54.69%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. NCBI nr
Match: gi|449469963|ref|XP_004152688.1| (PREDICTED: gamma carbonic anhydrase 1, mitochondrial [Cucumis sativus]) HSP 1 Score: 527.3 bits (1357), Expect = 1.6e-146 Identity = 262/273 (95.97%), Postives = 271/273 (99.27%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. NCBI nr
Match: gi|659087978|ref|XP_008444737.1| (PREDICTED: gamma carbonic anhydrase 1, mitochondrial [Cucumis melo]) HSP 1 Score: 526.9 bits (1356), Expect = 2.0e-146 Identity = 261/273 (95.60%), Postives = 271/273 (99.27%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. NCBI nr
Match: gi|702369173|ref|XP_010061298.1| (PREDICTED: gamma carbonic anhydrase 1, mitochondrial [Eucalyptus grandis]) HSP 1 Score: 504.2 bits (1297), Expect = 1.4e-139 Identity = 249/273 (91.21%), Postives = 263/273 (96.34%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. NCBI nr
Match: gi|703120297|ref|XP_010102071.1| (hypothetical protein L484_009014 [Morus notabilis]) HSP 1 Score: 501.1 bits (1289), Expect = 1.2e-138 Identity = 248/269 (92.19%), Postives = 260/269 (96.65%), Query Frame = 1
BLAST of CmaCh05G002560.1 vs. NCBI nr
Match: gi|661894996|emb|CDP01995.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 501.1 bits (1289), Expect = 1.2e-138 Identity = 248/269 (92.19%), Postives = 260/269 (96.65%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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