CmaCh04G008670.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTTCTCTGCGTTTGCTCTTCGTCAATTTCGTAAGTCTCCTATTCTTTTTTTTTATCTGTTTGTATTTGGCAATTTGGTAACCCTCTCTCTGTTTATTTTCTTTATTAAGTTTGTATGACTGCGATTATCTCATGCCCCTCTCATGTTTTCGGCTCATTTTTGTTATTGCTGTGTTATTTGATTGATTTTTCTCTTGGATGTGTGCTGATTTTCCTTATTTTTAACCATGTAAATCTTAATTGTTCCTTAATGATTTTAGCTATGGATCCTTTTAAATTTTATTTACAAACTAAGTTAAACAAAAAAAAACAGACGAAGGTACTTCTGGATTTGATGGCTTCTTCATCCCACATTTTGGAGGAAGAGAAAGAAGAGATAGATTCAGATGATGAATTTTTTCAAGACGGTTACCATACTATCACTAAAAAAGAAGAGATGGAATATTTTTGTGCTGTCAATGAATCCCAGGTTTATTATTTTCTCTTAATTTTTTCACTGTTCAAACTCTTTTTTTAAATGGGAGGATCTATGCAGGGTTTTGATGTACCATATTTTGGTGCCGTCTATGCATTTGGTCTCATCACTCCAATGAAATTGCATGGGTTCCCGGAGTTGTTTAAAGAGGTTCAAATCTCAGCAAATGAAGCTATCAAACATTACAACAGCGAAAATGTAATCGTTCTAACTTGCTGGCTGCCCATTTTGTATTTTTTATCGTGTTCTTTTATCATGTGAAAAAGAATATGTCCATCCATCTTCTATAAATGTTTCTTTTATCTTGTATGGATAGGGAACTAATTTTGAAGTTGTAGACATTGTGAAGGCTAATCACGAGGGGTGCTGTGGCTCAATGTATTACATCACATTTAATGTGAAGCCGATTGGAACTTCAGCAGAATTTCCCTCGATAACCTTCCAAGCTAAAGTTTATTATGCTATTCCTATCAAAGATATTATAGAAGTTGAACTTTGCAGGCCAAAGCCCTCTAATTAGCAAGAGATAAGCTAGTCATTACAAGCTTTTTAACATAATATTTTGTTTGGTTATGAGGTCACTTTGTACTGTTACAAACTTTTTTTTATTTTATTGGTGCTATGTTTGAAATTTGTATGGTTTTTTTTTTCAGCACAAATATGTGCAACATATCACTTTTAATACTAAAATAAAGCATATTTTAAT CTCTCTTCTCTGCGTTTGCTCTTCGTCAATTTCACGAAGGTACTTCTGGATTTGATGGCTTCTTCATCCCACATTTTGGAGGAAGAGAAAGAAGAGATAGATTCAGATGATGAATTTTTTCAAGACGGTTACCATACTATCACTAAAAAAGAAGAGATGGAATATTTTTGTGCTGTCAATGAATCCCAGGGTTTTGATGTACCATATTTTGGTGCCGTCTATGCATTTGGTCTCATCACTCCAATGAAATTGCATGGGTTCCCGGAGTTGTTTAAAGAGGTTCAAATCTCAGCAAATGAAGCTATCAAACATTACAACAGCGAAAATGGAACTAATTTTGAAGTTGTAGACATTGTGAAGGCTAATCACGAGGGGTGCTGTGGCTCAATGTATTACATCACATTTAATGTGAAGCCGATTGGAACTTCAGCAGAATTTCCCTCGATAACCTTCCAAGCTAAAGTTTATTATGCTATTCCTATCAAAGATATTATAGAAGTTGAACTTTGCAGGCCAAAGCCCTCTAATTAGCAAGAGATAAGCTAGTCATTACAAGCTTTTTAACATAATATTTTGTTTGGTTATGAGGTCACTTTGTACTGTTACAAACTTTTTTTTATTTTATTGGTGCTATGTTTGAAATTTGTATGGTTTTTTTTTTCAGCACAAATATGTGCAACATATCACTTTTAATACTAAAATAAAGCATATTTTAAT ATGGCTTCTTCATCCCACATTTTGGAGGAAGAGAAAGAAGAGATAGATTCAGATGATGAATTTTTTCAAGACGGTTACCATACTATCACTAAAAAAGAAGAGATGGAATATTTTTGTGCTGTCAATGAATCCCAGGGTTTTGATGTACCATATTTTGGTGCCGTCTATGCATTTGGTCTCATCACTCCAATGAAATTGCATGGGTTCCCGGAGTTGTTTAAAGAGGTTCAAATCTCAGCAAATGAAGCTATCAAACATTACAACAGCGAAAATGGAACTAATTTTGAAGTTGTAGACATTGTGAAGGCTAATCACGAGGGGTGCTGTGGCTCAATGTATTACATCACATTTAATGTGAAGCCGATTGGAACTTCAGCAGAATTTCCCTCGATAACCTTCCAAGCTAAAGTTTATTATGCTATTCCTATCAAAGATATTATAGAAGTTGAACTTTGCAGGCCAAAGCCCTCTAATTAG MASSSHILEEEKEEIDSDDEFFQDGYHTITKKEEMEYFCAVNESQGFDVPYFGAVYAFGLITPMKLHGFPELFKEVQISANEAIKHYNSENGTNFEVVDIVKANHEGCCGSMYYITFNVKPIGTSAEFPSITFQAKVYYAIPIKDIIEVELCRPKPSN
BLAST of CmaCh04G008670.1 vs. TrEMBL
Match: K4BJC5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 7.2e-10 Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. TrEMBL
Match: A0A0V0HMH0_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.5e-10 Identity = 52/147 (35.37%), Postives = 78/147 (53.06%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. TrEMBL
Match: A0A162AX79_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007960 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-09 Identity = 53/147 (36.05%), Postives = 72/147 (48.98%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. TrEMBL
Match: M0ZU59_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003145 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.6e-09 Identity = 49/147 (33.33%), Postives = 75/147 (51.02%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. TrEMBL
Match: V4JUM4_EUTSA (Uncharacterized protein (Fragment) OS=Eutrema salsugineum GN=EUTSA_v10023855mg PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.7e-09 Identity = 54/151 (35.76%), Postives = 74/151 (49.01%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. TAIR10
Match: AT1G63190.1 (AT1G63190.1 Cystatin/monellin superfamily protein) HSP 1 Score: 55.8 bits (133), Expect = 2.7e-08 Identity = 48/157 (30.57%), Postives = 73/157 (46.50%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. TAIR10
Match: AT2G37435.1 (AT2G37435.1 Cystatin/monellin superfamily protein) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07 Identity = 44/148 (29.73%), Postives = 76/148 (51.35%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. TAIR10
Match: AT1G63200.1 (AT1G63200.1 Cystatin/monellin superfamily protein) HSP 1 Score: 52.0 bits (123), Expect = 3.9e-07 Identity = 47/157 (29.94%), Postives = 68/157 (43.31%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. TAIR10
Match: AT1G63206.1 (AT1G63206.1 Cystatin/monellin superfamily protein) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06 Identity = 41/132 (31.06%), Postives = 66/132 (50.00%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. NCBI nr
Match: gi|1021569949|ref|XP_016176170.1| (PREDICTED: uncharacterized protein LOC107618578 isoform X1 [Arachis ipaensis]) HSP 1 Score: 74.3 bits (181), Expect = 2.1e-10 Identity = 55/145 (37.93%), Postives = 77/145 (53.10%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. NCBI nr
Match: gi|970014054|ref|XP_015068007.1| (PREDICTED: UPF0725 protein At4g29550-like [Solanum pennellii]) HSP 1 Score: 73.9 bits (180), Expect = 2.7e-10 Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. NCBI nr
Match: gi|1012229977|ref|XP_015938109.1| (PREDICTED: cysteine proteinase inhibitor 2-like isoform X4 [Arachis duranensis]) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-09 Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. NCBI nr
Match: gi|460379190|ref|XP_004235347.1| (PREDICTED: UPF0725 protein At4g29550-like [Solanum lycopersicum]) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-09 Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = 1
BLAST of CmaCh04G008670.1 vs. NCBI nr
Match: gi|1021049343|gb|KZN07123.1| (hypothetical protein DCAR_007960 [Daucus carota subsp. sativus]) HSP 1 Score: 70.9 bits (172), Expect = 2.3e-09 Identity = 53/147 (36.05%), Postives = 72/147 (48.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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