CmaCh02G011020.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCATTGCAAAACAAGTTAGTTAGCTCTCTTCATTCCAATTTCTCTTTAATTTCTTCTTCTCAAGACATAATTACCTTAAAAAACATCATGGGATCTCATCATAGCATTCGAATGATTGTTGGAATCTTTGGTATGCTTTGTTTTTTTATGAATTTCTTTGAACATTTCTGTTCAAAATGACCATTTTTTTTCTCTGTGTTTCTTCTCTATGCAGGAAATGGTGCATCTTTGCTGCTTTATTGTGTTCCCATGTAATGAAATCTGCCAACTTTGTTCTTGTTGTTTGGAGACAAAAAATGGTTTAAATCTTATCTAACTTGAACGTTTTCGTGCCTAAAACTCGATAAAAAAAGACACCATTTTAGACGTTTTTGCTATTGGATTTGATATCAACTTGAAGTGGACAAGCATTTGAAGGCATGCCCACATAGCTAATTAATAAGTTGGGTGTGTTTATGCAGATTGACATTTTGGAGGGTTGTAAAGAAGAAAAGCACAGAGGAGTTTTCATGTGTTCCATACATTGTGGCGCTGTTGAATTGTCTTCTTTATACTTGGTATGCTTTACCAGTTGTGAGCAATGGATGGGAGAACTTCCCTGTTGTCACCATTAATGGCTTTGGTGTTCTTCTTGAGTTCTCTTTCATTTTCATCTACTTCTGGTTTTCCTCTCCGAAACGGAAGGCAAGTTTTTGTATACGATCCCGTTTGATAAACATTTTGTGTTATAATTTCTTGTTTTCTTTTCGAACATGAATTTGTTCATTAGTTCGTTTGTTTTAAAAACAGTAATTTAATAGAGGAAGTCGCCTCTACTACTGCAAATTTCTATGAAATTTGGTAGAAGGGTTTCAAGTTTTACTATTTTAAACGATAATTTCTCTTCAAATTTTCTCAAATTCGCTAAGTAACATCATATAAATTTAATACTCGAGGTAAAAACAAATGACCTTAGTGAAACAATGAATACGTTTAAGCTCAAAATTTATAAGAATTATTAATATGGTTTCTTTTAGGCTTAAAAAAGTTCTAAAATTATCTGCAGAAGCAGGTGACTTTGAGATTGGTGGGAGTTGTTACAGTGTTCAGCTGTGTGGGGATGATCTCTACTTTTGCTTTGAAAAGTCACCATCTTCGGAAGCTTTTTGTGGGATGCATTGGTCTTGTTGCTTCCGTTGCCATGTATGGCTCTCCATTGGTAGCTATGGTAAGCTCGCGCCAAAACCCTTTAGTCAAAACTTGCTCCGACATTCTTGTTTCGTGTTTCTTGTTTTCACTTTTGCTCGGATGTTATCAAACGACAACCTAATTTCATCACAACAGCTGATACCTACAAAAGAGACAATGTTTGTGTTTGTCACTAAAAGTTTATTTGTCATGCAGAAACAAGTAATAAAAACAAAGAGTGTTGAATATATGCCATTTTATTTGTCATTCTTCTCCTTCTCTGCAAGCTCTTTGTGGTTAGCTTATGGACTCCTCAGCCATGACCTCTTCCTTGCAGTCAGTATTACCAAATCTCTCCTTTTTTTTTTTTTTCTTTTTCCATATGAACTTGAAAGTAAATTAACTCATGAAACTTTGAATGGATTTGCAGTCTCCAAATCTAGTGGGAAGCCCATTAGGGTTGCTACAGCTTGTGTTGTATTGCATCTATAGGAATAAGGGAAAAGAAGAAGAAGAAGGATGTGTTAAAGAGGCTGTGGCCAATTGGGACATGGAAAAGAATAATGCAAAACAAATTCCACACCAAAATGGCTCTCAAGTTTAGTGATCTCTCACTCTATCTCTCTTACATAAATGCTTCTTCTAGAAGCCAAAGGTCTCTCCGCTCTCTGGAAGCCAAAAAATCCTTCTGGGTTTACACACTGAATGTTTATTTTCATATTTCAATATAGTTTTGTTGAACTCAATACAACGAGAGTGAAGATTTGAACCTCAAGCCTTTTGAGTACAGATATGTCAAGTGATACGAAGCACAAGATTTTATCCTAATATTACATTATAGGTACTATAGTGGAGATTCAGATCTATGAATACTTAGAAGAGATAGAAATGCACAAGTACTAAGCTATTACTGTGCTATACTTGAATTTGAAGTAAAATATATTTTCTCTATAGATTCTTTGCAAGAAGCACTAATCAAGAGTATGGATTTTTTTTTTTTTTTTTGTTCTACATGGGGAGGTTTGATTCATTCTGAATTCTTTAATTCGGAATAAAAGGTTTCGCTGTGACCGTAAAGAGTAGGTAACCCATTACCTGTGTCTTTGTTTCTATTGCATAAATGTCTGGCTAACGTGGTAACAAGACTAAGGAAGATGCCTAGCTAGTTTTGAACTAGAGCAGGGAAGTGAAGCCCAAAGAGCACGTTGCTACACGATTAGCATGGAGAGAAAAGCGGCAGTCCTTCCATGTTAGTTTTGAAACTAAATTCAAATACTAGAGACCCAAAAATGTATTCTGCCCTTAATTAATTTAGGTATTGAATAGACCTTGGCACTTCCCCACGGCTATTCAACTGTTTTATGTGGTTGATTTGAAGTATCAACTAAAGTGTTTTTGTTGAAATATCACTGTGAATTGTCATCTCCGAGACTAACTGGCAGACCCACTCCTACGGAT TGTCATTGCAAAACAAGTTAGTTAGCTCTCTTCATTCCAATTTCTCTTTAATTTCTTCTTCTCAAGACATAATTACCTTAAAAAACATCATGGGATCTCATCATAGCATTCGAATGATTGTTGGAATCTTTGGAAATGGTGCATCTTTGCTGCTTTATTGTGTTCCCATATTGACATTTTGGAGGGTTGTAAAGAAGAAAAGCACAGAGGAGTTTTCATGTGTTCCATACATTGTGGCGCTGTTGAATTGTCTTCTTTATACTTGGTATGCTTTACCAGTTGTGAGCAATGGATGGGAGAACTTCCCTGTTGTCACCATTAATGGCTTTGGTGTTCTTCTTGAGTTCTCTTTCATTTTCATCTACTTCTGGTTTTCCTCTCCGAAACGGAAGAAGCAGGTGACTTTGAGATTGGTGGGAGTTGTTACAGTGTTCAGCTGTGTGGGGATGATCTCTACTTTTGCTTTGAAAAGTCACCATCTTCGGAAGCTTTTTGTGGGATGCATTGGTCTTGTTGCTTCCGTTGCCATGTATGGCTCTCCATTGGTAGCTATGAAACAAGTAATAAAAACAAAGAGTGTTGAATATATGCCATTTTATTTGTCATTCTTCTCCTTCTCTGCAAGCTCTTTGTGGTTAGCTTATGGACTCCTCAGCCATGACCTCTTCCTTGCATCTCCAAATCTAGTGGGAAGCCCATTAGGGTTGCTACAGCTTGTGTTGTATTGCATCTATAGGAATAAGGGAAAAGAAGAAGAAGAAGGATGTGTTAAAGAGGCTGTGGCCAATTGGGACATGGAAAAGAATAATGCAAAACAAATTCCACACCAAAATGGCTCTCAAGTTTAGTGATCTCTCACTCTATCTCTCTTACATAAATGCTTCTTCTAGAAGCCAAAGGTCTCTCCGCTCTCTGGAAGCCAAAAAATCCTTCTGGGTTTACACACTGAATGTTTATTTTCATATTTCAATATAGTTTTGTTGAACTCAATACAACGAGAGTGAAGATTTGAACCTCAAGCCTTTTGAGTACAGATATGTCAAGTGATACGAAGCACAAGATTTTATCCTAATATTACATTATAGGTACTATAGTGGAGATTCAGATCTATGAATACTTAGAAGAGATAGAAATGCACAAGTACTAAGCTATTACTGTGCTATACTTGAATTTGAAGTAAAATATATTTTCTCTATAGATTCTTTGCAAGAAGCACTAATCAAGAGTATGGATTTTTTTTTTTTTTTTTGTTCTACATGGGGAGGTTTGATTCATTCTGAATTCTTTAATTCGGAATAAAAGGTTTCGCTGTGACCGTAAAGAGTAGGTAACCCATTACCTGTGTCTTTGTTTCTATTGCATAAATGTCTGGCTAACGTGGTAACAAGACTAAGGAAGATGCCTAGCTAGTTTTGAACTAGAGCAGGGAAGTGAAGCCCAAAGAGCACGTTGCTACACGATTAGCATGGAGAGAAAAGCGGCAGTCCTTCCATGTTAGTTTTGAAACTAAATTCAAATACTAGAGACCCAAAAATGTATTCTGCCCTTAATTAATTTAGGTATTGAATAGACCTTGGCACTTCCCCACGGCTATTCAACTGTTTTATGTGGTTGATTTGAAGTATCAACTAAAGTGTTTTTGTTGAAATATCACTGTGAATTGTCATCTCCGAGACTAACTGGCAGACCCACTCCTACGGAT ATGGGATCTCATCATAGCATTCGAATGATTGTTGGAATCTTTGGAAATGGTGCATCTTTGCTGCTTTATTGTGTTCCCATATTGACATTTTGGAGGGTTGTAAAGAAGAAAAGCACAGAGGAGTTTTCATGTGTTCCATACATTGTGGCGCTGTTGAATTGTCTTCTTTATACTTGGTATGCTTTACCAGTTGTGAGCAATGGATGGGAGAACTTCCCTGTTGTCACCATTAATGGCTTTGGTGTTCTTCTTGAGTTCTCTTTCATTTTCATCTACTTCTGGTTTTCCTCTCCGAAACGGAAGAAGCAGGTGACTTTGAGATTGGTGGGAGTTGTTACAGTGTTCAGCTGTGTGGGGATGATCTCTACTTTTGCTTTGAAAAGTCACCATCTTCGGAAGCTTTTTGTGGGATGCATTGGTCTTGTTGCTTCCGTTGCCATGTATGGCTCTCCATTGGTAGCTATGAAACAAGTAATAAAAACAAAGAGTGTTGAATATATGCCATTTTATTTGTCATTCTTCTCCTTCTCTGCAAGCTCTTTGTGGTTAGCTTATGGACTCCTCAGCCATGACCTCTTCCTTGCATCTCCAAATCTAGTGGGAAGCCCATTAGGGTTGCTACAGCTTGTGTTGTATTGCATCTATAGGAATAAGGGAAAAGAAGAAGAAGAAGGATGTGTTAAAGAGGCTGTGGCCAATTGGGACATGGAAAAGAATAATGCAAAACAAATTCCACACCAAAATGGCTCTCAAGTTTAG MGSHHSIRMIVGIFGNGASLLLYCVPILTFWRVVKKKSTEEFSCVPYIVALLNCLLYTWYALPVVSNGWENFPVVTINGFGVLLEFSFIFIYFWFSSPKRKKQVTLRLVGVVTVFSCVGMISTFALKSHHLRKLFVGCIGLVASVAMYGSPLVAMKQVIKTKSVEYMPFYLSFFSFSASSLWLAYGLLSHDLFLASPNLVGSPLGLLQLVLYCIYRNKGKEEEEGCVKEAVANWDMEKNNAKQIPHQNGSQV
BLAST of CmaCh02G011020.1 vs. Swiss-Prot
Match: SWET3_ARATH (Bidirectional sugar transporter SWEET3 OS=Arabidopsis thaliana GN=SWEET3 PE=1 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 3.2e-77 Identity = 141/212 (66.51%), Postives = 169/212 (79.72%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. Swiss-Prot
Match: SWT3B_ORYSJ (Bidirectional sugar transporter SWEET3b OS=Oryza sativa subsp. japonica GN=SWEET3B PE=3 SV=2) HSP 1 Score: 283.5 bits (724), Expect = 2.3e-75 Identity = 139/220 (63.18%), Postives = 171/220 (77.73%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. Swiss-Prot
Match: SWT3A_ORYSJ (Bidirectional sugar transporter SWEET3a OS=Oryza sativa subsp. japonica GN=SWEET3A PE=3 SV=2) HSP 1 Score: 256.1 bits (653), Expect = 3.9e-67 Identity = 128/239 (53.56%), Postives = 168/239 (70.29%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. Swiss-Prot
Match: SWT1A_ORYSJ (Bidirectional sugar transporter SWEET1a OS=Oryza sativa subsp. japonica GN=SWEET1A PE=2 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.1e-45 Identity = 103/214 (48.13%), Postives = 137/214 (64.02%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. Swiss-Prot
Match: SWET1_ARATH (Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana GN=SWEET1 PE=1 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.4e-45 Identity = 100/216 (46.30%), Postives = 138/216 (63.89%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TrEMBL
Match: A0A0A0KNA4_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_5G139600 PE=3 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-108 Identity = 202/259 (77.99%), Postives = 223/259 (86.10%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TrEMBL
Match: A0A059DFJ7_EUCGR (Bidirectional sugar transporter SWEET OS=Eucalyptus grandis GN=EUGRSUZ_A01497 PE=3 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 3.8e-85 Identity = 158/233 (67.81%), Postives = 187/233 (80.26%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TrEMBL
Match: E0CUJ5_VITVI (Bidirectional sugar transporter SWEET OS=Vitis vinifera GN=VIT_16s0050g02540 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 8.4e-85 Identity = 161/236 (68.22%), Postives = 186/236 (78.81%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TrEMBL
Match: B9I542_POPTR (Bidirectional sugar transporter SWEET OS=Populus trichocarpa GN=POPTR_0012s01400g PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 3.2e-84 Identity = 158/243 (65.02%), Postives = 188/243 (77.37%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TrEMBL
Match: A0A022QC46_ERYGU (Bidirectional sugar transporter SWEET OS=Erythranthe guttata GN=MIMGU_mgv1a021292mg PE=3 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.5e-81 Identity = 158/241 (65.56%), Postives = 184/241 (76.35%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TAIR10
Match: AT5G53190.1 (AT5G53190.1 Nodulin MtN3 family protein) HSP 1 Score: 289.7 bits (740), Expect = 1.8e-78 Identity = 141/212 (66.51%), Postives = 169/212 (79.72%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TAIR10
Match: AT1G21460.1 (AT1G21460.1 Nodulin MtN3 family protein) HSP 1 Score: 184.5 bits (467), Expect = 8.1e-47 Identity = 100/216 (46.30%), Postives = 138/216 (63.89%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TAIR10
Match: AT5G13170.1 (AT5G13170.1 senescence-associated gene 29) HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42 Identity = 93/225 (41.33%), Postives = 147/225 (65.33%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TAIR10
Match: AT4G15920.1 (AT4G15920.1 Nodulin MtN3 family protein) HSP 1 Score: 162.9 bits (411), Expect = 2.5e-40 Identity = 89/209 (42.58%), Postives = 132/209 (63.16%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. TAIR10
Match: AT4G10850.1 (AT4G10850.1 Nodulin MtN3 family protein) HSP 1 Score: 159.1 bits (401), Expect = 3.6e-39 Identity = 99/252 (39.29%), Postives = 142/252 (56.35%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. NCBI nr
Match: gi|778698935|ref|XP_011654626.1| (PREDICTED: bidirectional sugar transporter SWEET3b isoform X1 [Cucumis sativus]) HSP 1 Score: 401.0 bits (1029), Expect = 1.6e-108 Identity = 202/259 (77.99%), Postives = 223/259 (86.10%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. NCBI nr
Match: gi|659074681|ref|XP_008437737.1| (PREDICTED: bidirectional sugar transporter SWEET3b, partial [Cucumis melo]) HSP 1 Score: 363.2 bits (931), Expect = 3.6e-97 Identity = 183/232 (78.88%), Postives = 198/232 (85.34%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. NCBI nr
Match: gi|720017596|ref|XP_010261514.1| (PREDICTED: bidirectional sugar transporter SWEET3-like [Nelumbo nucifera]) HSP 1 Score: 327.0 bits (837), Expect = 2.9e-86 Identity = 165/251 (65.74%), Postives = 198/251 (78.88%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. NCBI nr
Match: gi|629124761|gb|KCW89186.1| (hypothetical protein EUGRSUZ_A01497 [Eucalyptus grandis]) HSP 1 Score: 322.8 bits (826), Expect = 5.4e-85 Identity = 158/233 (67.81%), Postives = 187/233 (80.26%), Query Frame = 1
BLAST of CmaCh02G011020.1 vs. NCBI nr
Match: gi|702243148|ref|XP_010049431.1| (PREDICTED: bidirectional sugar transporter SWEET3 [Eucalyptus grandis]) HSP 1 Score: 322.8 bits (826), Expect = 5.4e-85 Identity = 158/233 (67.81%), Postives = 187/233 (80.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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