CmaCh20G007970 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGAAGCAACAGGCAGGAGGAGGGGCATTTGACAGTCTTTTGGTTTTATAGTACAGGGGTAGTTTCGTCATTGGAGCAATATCGTTATGACAGTTGAGAAGCTACAGTTTTGATCCATTTTGCAAGCGTGGACAAATTAAGCTTGCTGACGAGGATTTAATTTTCAATATTTTTAAATTAAGTTTATTCTAAATTAATAAAAATACATTTGATTTTTATAGCATAAGCATCTTTTAGGTAGCAAATTTAAACAATAACTTTCAAAATCATTAAATCAACCTACAACCATTTAATCACTTTTTTTTTTTTTTTTTTTTTTTTAAGATATTTGAGTTTAGGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAGCCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGATGGGTATCGGTGGCGAAAGTACGGTCAAAAAGCCGTGAAGAACAGTCCTTACCCTAGGTTTGTCTTCTTCATATTTTCATAATAATATGATATTTTTTTACTTTGAATCATTATTCATGATGAAATCGTTATACTGATAAAACAGAAGCTATTACCGTTGTACTACGGTAGGGTGTGGTGTGAAGAAGAGAGTGGAGCGATTGTCCAACGACCAATCGACCGTCGTTACAACTTACGAAGGCCAACACACCCATCAAAGTCCGATAATTCCACGAGGTAGTATCAGAGTCCTACCGGAATCCAATCTCGACGTTACTTCCACCACCGGACTTTTATTTNCCCGGTTTTTCAATTAATGTTTCGAAATTTTTAAGTCTGGTTAAAAAATTATACTTCACCAAATCTCTTGGTTTAATATTTAGATTTGGAATGTCATTTAACTTCCAACAATTAGGGTTACACGGTGATTAGTCATTTCTATCTCTCGATGGAGGGCAAGGGAAGGGATATAACTCAACGGTAGAGTGTTGCCTTGACATGGCGGAAGTCATCGATTCGAGCTTGATTATCCCTAAACCCAATGTGAGTTTTTCTATTTTTACTTGCTCCCCTGCCGTGATCGAATGAGAATGGATAAGAGACTCGTGGGATTGACGTGAGGGGGTGGGGATGGCTATATTTCTGGGAGCGAACTCCAGACAATATAAAACGCATTGATACAAGTTATGCCTTGGAATGAAATCTTAAATAGGGTGGAAATCTCCATTTGAATGGAAAATAGGAAAGTGAGTAGGGAAAGATATCTCTGTTAGTCAAACGAAGCAAGGGACAAACATTATAACTAACTATATAATATTGAAATTTGAGTTTATAAAAGTTAGGTTGTTATGAAATATTATTGAATTAATTAAGATTTTTTTTAATAGAAATTAAATTAAAAAATAGAAATAATCATTAATTTTTTTTTAATATATATATATATATAGATGAAAAAAAAAAAAATCATGTATGGAACTCTATCTGCGAAAAAATAAATGGAAAATTTTGTGAAAATAAAAATTGAAATAGGAGACAAGAATGGATAAGGCTCCTCTGCACCGTGGACATCTCTATGTTCAATTCCTCTAAATTAAATGTGTAGACAAAACATTCATTATCAGATGACTTGCTCGTTGCTCCATCCTTAACATTGTTGATCCAAAGAACAAGTAACATAAATTTGGTTAAGAAAAAGATCAAAGGTACGGGAAAAAATCATGGAAAAGAAATCACAGTAACCTTTCAAGGCCTAGAAGTGACTTCAATGAAAGTATCTTCTCTACATGCAATAGTTAGGCTGCCAATTAGAAGACCAAAGCTAAATTCTTCAGCTTAAGAACTTTCTTAAGAATTTCTCCACACATAAACTGCAGAGAAGCCTTTGGGAACCTCCAAGAAGCTGAAATTGCCTTTCTTTCCCTCGAAATGCACCGTTTAAGAACTTTATTTCAGAATGACTGTGAGATCTCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTTCCTAGCAGACGCGTTTTAAAAACTTTGAGGGAAAGTCCGAAAGGGAAAGTCCAAAGAGGACAATATCTACTAGGTAGATTTTGGGTGTTATAAAGACACTTTGTAAACGATTCCCATGTCAGTTTTTTTTCGTTAATGAACAATGAACTGAAAGTGCAATGCAACCACAAGTTTATGTCCGTATTTATATTGATAAATTGGTGGAAAAGGAAGATATCAAAGTTCTGAGGCAATGGAGGAAGAAGCAGGTTGGGTTGGGGTCTGGTTAGAGCAGAGTTCACAAGGGTTTCACATGGCTCTGTCTTTCAACTTGCAGTTTGGGCTCAGGGCTGAGAGGGCATCAGTGTTCCATTTTGGTCCTGAACAGTGTCCTACAGAATCAGCCATTGGTCAATTTGAGGACCAGCAGAAGATTCGAAAGGGCTAG ATGGGAGGAAGCAACAGGCAGGAGGAGGGGCATTTGACAGTCTTTTGGTTTTATAGTACAGGGATATTTGAGTTTAGGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAGCCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGATGGGTATCGGTGGCGAAAGTACGGTCAAAAAGCCGTGAAGAACAGTCCTTACCCTAGAAGCTATTACCGTTGTACTACGGTAGGGTGTGGTGTGAAGAAGAGAGTGGAGCGATTGTCCAACGACCAATCGACCGTCGTTACAACTTACGAAGGCCAACACACCCATCAAAGTCCGATAATTCCACGAGGTAGTATCAGAGTCCTACCGGAATCCAATCTCGACTTTGGGCTCAGGGCTGAGAGGGCATCAGTGTTCCATTTTGGTCCTGAACAGTGTCCTACAGAATCAGCCATTGGTCAATTTGAGGACCAGCAGAAGATTCGAAAGGGCTAG ATGGGAGGAAGCAACAGGCAGGAGGAGGGGCATTTGACAGTCTTTTGGTTTTATAGTACAGGGATATTTGAGTTTAGGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAGCCGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGATGGGTATCGGTGGCGAAAGTACGGTCAAAAAGCCGTGAAGAACAGTCCTTACCCTAGAAGCTATTACCGTTGTACTACGGTAGGGTGTGGTGTGAAGAAGAGAGTGGAGCGATTGTCCAACGACCAATCGACCGTCGTTACAACTTACGAAGGCCAACACACCCATCAAAGTCCGATAATTCCACGAGGTAGTATCAGAGTCCTACCGGAATCCAATCTCGACTTTGGGCTCAGGGCTGAGAGGGCATCAGTGTTCCATTTTGGTCCTGAACAGTGTCCTACAGAATCAGCCATTGGTCAATTTGAGGACCAGCAGAAGATTCGAAAGGGCTAG MGGSNRQEEGHLTVFWFYSTGIFEFRLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERLSNDQSTVVTTYEGQHTHQSPIIPRGSIRVLPESNLDFGLRAERASVFHFGPEQCPTESAIGQFEDQQKIRKG
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.0e-43 Identity = 85/115 (73.91%), Postives = 93/115 (80.87%), Query Frame = 1
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37 Identity = 76/116 (65.52%), Postives = 87/116 (75.00%), Query Frame = 1
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 7.5e-35 Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.4e-33 Identity = 67/92 (72.83%), Postives = 73/92 (79.35%), Query Frame = 1
BLAST of CmaCh20G007970 vs. Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 3.1e-33 Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TrEMBL
Match: A0A0A0L834_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G168410 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 5.9e-47 Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TrEMBL
Match: D9ZJG1_MALDO (WRKY domain class transcription factor OS=Malus domestica GN=WRKY6 PE=2 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44 Identity = 90/122 (73.77%), Postives = 102/122 (83.61%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TrEMBL
Match: A0A140H8Q1_MANES (WRKY transcription factor 47 OS=Manihot esculenta PE=2 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 3.6e-44 Identity = 85/101 (84.16%), Postives = 93/101 (92.08%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TrEMBL
Match: B9RZT1_RICCO (WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_1000990 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 4.7e-44 Identity = 84/102 (82.35%), Postives = 93/102 (91.18%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TrEMBL
Match: S5CFS2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=WRKY23 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43 Identity = 84/101 (83.17%), Postives = 92/101 (91.09%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48) HSP 1 Score: 176.8 bits (447), Expect = 1.1e-44 Identity = 85/115 (73.91%), Postives = 93/115 (80.87%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT2G47260.1 (AT2G47260.1 WRKY DNA-binding protein 23) HSP 1 Score: 157.1 bits (396), Expect = 9.1e-39 Identity = 76/116 (65.52%), Postives = 87/116 (75.00%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT1G69310.1 (AT1G69310.1 WRKY DNA-binding protein 57) HSP 1 Score: 148.3 bits (373), Expect = 4.2e-36 Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT4G18170.1 (AT4G18170.1 WRKY DNA-binding protein 28) HSP 1 Score: 144.1 bits (362), Expect = 7.9e-35 Identity = 67/92 (72.83%), Postives = 73/92 (79.35%), Query Frame = 1
BLAST of CmaCh20G007970 vs. TAIR10
Match: AT1G29860.1 (AT1G29860.1 WRKY DNA-binding protein 71) HSP 1 Score: 142.9 bits (359), Expect = 1.8e-34 Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 1
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|778679105|ref|XP_011651087.1| (PREDICTED: probable WRKY transcription factor 48 [Cucumis sativus]) HSP 1 Score: 195.3 bits (495), Expect = 8.5e-47 Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|659077791|ref|XP_008439387.1| (PREDICTED: probable WRKY transcription factor 48 [Cucumis melo]) HSP 1 Score: 192.6 bits (488), Expect = 5.5e-46 Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|694393330|ref|XP_009372109.1| (PREDICTED: probable WRKY transcription factor 48 [Pyrus x bretschneideri]) HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45 Identity = 91/123 (73.98%), Postives = 103/123 (83.74%), Query Frame = 1
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|658309565|ref|NP_001281064.1| (probable WRKY transcription factor 48 [Malus domestica]) HSP 1 Score: 187.2 bits (474), Expect = 2.3e-44 Identity = 90/122 (73.77%), Postives = 102/122 (83.61%), Query Frame = 1
BLAST of CmaCh20G007970 vs. NCBI nr
Match: gi|1003003090|gb|AMO00415.1| (WRKY transcription factor 47 [Manihot esculenta]) HSP 1 Score: 186.0 bits (471), Expect = 5.2e-44 Identity = 85/101 (84.16%), Postives = 93/101 (92.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |