CmaCh20G001320 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCGATCTCTGTTTCTGGCTGTGATTTTCCTCTTGATTCCTCACATTGGTCCCGTATTCAACGACAAAGGAAAATTCCTCTCGTTCGATTCCAAAAAGCCTCACTCTATGACCAAACGAGAATTCTTCGACTTAATCGACGAATTGAAAACCGCCGAAATTCTCATGAAGGATAAACAGAGCCTTGTGTTGATTGCAGGATCCAATTCAAACACCGAGGCTGCGGATCATTATGCCGATTATCTGAGAAGAATGGGAGCCGATGTAGTAATAGAGAACTATTTGCCGCGATTCTCCTCTGAGAACGAATCGTTTGATATCGTGTTCACGCTAGGGCAACTCGGAGCAAGATTTGTTGACCGTGTTCTTAAAAGCGGCGGCGCAGTGGTTGTTCCGGCGAATGATATGTCTCTAAATGTGTACCTCGATGAATTGAAATATACGTGCGTTTACTTAAAGCCTTACAGTCTTGAATCGATCATCATCGTGGTGGTGAAACCAAGTCCGCCTCATCAATTAGATGCCGGCGAGTTACGCCGGCGGCCACATTGA ATGTCTCGATCTCTGTTTCTGGCTGTGATTTTCCTCTTGATTCCTCACATTGGTCCCGTATTCAACGACAAAGGAAAATTCCTCTCGTTCGATTCCAAAAAGCCTCACTCTATGACCAAACGAGAATTCTTCGACTTAATCGACGAATTGAAAACCGCCGAAATTCTCATGAAGGATAAACAGAGCCTTGTGTTGATTGCAGGATCCAATTCAAACACCGAGGCTGCGGATCATTATGCCGATTATCTGAGAAGAATGGGAGCCGATGTAGTAATAGAGAACTATTTGCCGCGATTCTCCTCTGAGAACGAATCGTTTGATATCGTGTTCACGCTAGGGCAACTCGGAGCAAGATTTGTTGACCGTGTTCTTAAAAGCGGCGGCGCAGTGGTTGTTCCGGCGAATGATATGTCTCTAAATGTGTACCTCGATGAATTGAAATATACGTGCGTTTACTTAAAGCCTTACAGTCTTGAATCGATCATCATCGTGGTGGTGAAACCAAGTCCGCCTCATCAATTAGATGCCGGCGAGTTACGCCGGCGGCCACATTGA ATGTCTCGATCTCTGTTTCTGGCTGTGATTTTCCTCTTGATTCCTCACATTGGTCCCGTATTCAACGACAAAGGAAAATTCCTCTCGTTCGATTCCAAAAAGCCTCACTCTATGACCAAACGAGAATTCTTCGACTTAATCGACGAATTGAAAACCGCCGAAATTCTCATGAAGGATAAACAGAGCCTTGTGTTGATTGCAGGATCCAATTCAAACACCGAGGCTGCGGATCATTATGCCGATTATCTGAGAAGAATGGGAGCCGATGTAGTAATAGAGAACTATTTGCCGCGATTCTCCTCTGAGAACGAATCGTTTGATATCGTGTTCACGCTAGGGCAACTCGGAGCAAGATTTGTTGACCGTGTTCTTAAAAGCGGCGGCGCAGTGGTTGTTCCGGCGAATGATATGTCTCTAAATGTGTACCTCGATGAATTGAAATATACGTGCGTTTACTTAAAGCCTTACAGTCTTGAATCGATCATCATCGTGGTGGTGAAACCAAGTCCGCCTCATCAATTAGATGCCGGCGAGTTACGCCGGCGGCCACATTGA MSRSLFLAVIFLLIPHIGPVFNDKGKFLSFDSKKPHSMTKREFFDLIDELKTAEILMKDKQSLVLIAGSNSNTEAADHYADYLRRMGADVVIENYLPRFSSENESFDIVFTLGQLGARFVDRVLKSGGAVVVPANDMSLNVYLDELKYTCVYLKPYSLESIIIVVVKPSPPHQLDAGELRRRPH
BLAST of CmaCh20G001320 vs. TrEMBL
Match: A0A0A0KJZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G427990 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 9.8e-59 Identity = 128/190 (67.37%), Postives = 152/190 (80.00%), Query Frame = 1
BLAST of CmaCh20G001320 vs. TrEMBL
Match: M5XEF9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007125mg PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.0e-07 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 1
BLAST of CmaCh20G001320 vs. TrEMBL
Match: W9RID4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011169 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06 Identity = 46/169 (27.22%), Postives = 78/169 (46.15%), Query Frame = 1
BLAST of CmaCh20G001320 vs. TrEMBL
Match: A0A068TM34_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014728001 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.3e-06 Identity = 44/157 (28.03%), Postives = 76/157 (48.41%), Query Frame = 1
BLAST of CmaCh20G001320 vs. NCBI nr
Match: gi|778722330|ref|XP_011658464.1| (PREDICTED: uncharacterized protein LOC105436015 [Cucumis sativus]) HSP 1 Score: 234.6 bits (597), Expect = 1.4e-58 Identity = 128/190 (67.37%), Postives = 152/190 (80.00%), Query Frame = 1
BLAST of CmaCh20G001320 vs. NCBI nr
Match: gi|764567628|ref|XP_011462229.1| (PREDICTED: uncharacterized protein LOC105350910 [Fragaria vesca subsp. vesca]) HSP 1 Score: 66.2 bits (160), Expect = 6.6e-08 Identity = 57/185 (30.81%), Postives = 95/185 (51.35%), Query Frame = 1
BLAST of CmaCh20G001320 vs. NCBI nr
Match: gi|596170862|ref|XP_007223120.1| (hypothetical protein PRUPE_ppa007125mg [Prunus persica]) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-07 Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 1
BLAST of CmaCh20G001320 vs. NCBI nr
Match: gi|645233458|ref|XP_008223356.1| (PREDICTED: uncharacterized protein LOC103323165 [Prunus mume]) HSP 1 Score: 64.7 bits (156), Expect = 1.9e-07 Identity = 53/178 (29.78%), Postives = 88/178 (49.44%), Query Frame = 1
BLAST of CmaCh20G001320 vs. NCBI nr
Match: gi|703110023|ref|XP_010099469.1| (hypothetical protein L484_011169 [Morus notabilis]) HSP 1 Score: 60.8 bits (146), Expect = 2.8e-06 Identity = 46/169 (27.22%), Postives = 78/169 (46.15%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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