CmaCh17G005260 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGGTCTTGCGTCGCCTTGGAAGCGTCCTCCATTCGGAAGGTATTTGCATGAGTCAATAACAAGGTGAATAAAGAAAGTATTTATAGTAAGTGGGAGAAGGAAGTATGTCAACACCTCCTATGGTCTCTACCACTAGGTTGCACCGTGAGATTCCCATGTTCCATTTGCATGTTGCCCTAGAGCAACTATCCATTCAGAGGGTCGTAACATGGGAGTCGAAACAACGCAAACTCCATAAATGGATAGGATTTCTTAGGTCCGTTTCCAACTTTGGCTTTTTCATTCGATAGAGTTGTTGGGACCGATCTCTGAGGTTTAAAATGGCGGGTCACACTTACAAAGAATTACTAAGAGTTAGTATATTCTTGATCAAAATAGCGATAACTAAAAACACTATAGGAACAAGAGTTATTATGGGATTAGTGTTTAAAGTAAAAAATGTCTTGGTTTAGTGAATGAGTGATTGACTGCCCCTCGATAGCAGTTGCTCTAACTCACTAAAGTATTGTTGCAAATTAATAATTTTTTGGTACATTATTACATTTGCTAAAATTGATTGGATTAAACAGGATTAAGTCAAATCACTAATAGAATTTTCTTTGTATCACACAGCATGACAAACTCAATAGTACAATAACTCGCTTCTGAGAAATTAAACGGCGACAATTACGTAACTTGGAAATCAAACCTAAACACAATACTGGTTATTGATGATTTAAGGTTTGTTTTAATTGAGGAATGTCCTCCAAACACCAGCTCAAATGCAAACCGAACAGTTCGGGATGCGTATGACAAATGGATAAAGGAAAATGACAAATCCCGAGTGTACATTCTAGCTAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGAGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCATCCTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGTCGTATGAAAGAAGGGACCTCAGTTAGAGAACTTGTCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCAAAGAGCTTCTTCCAGTTCCGCACAAATGTGGTAATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAATCCCTCTTAACGAACAAGGGCGACTAA ATGCTCGGTCTTGCGTCGCCTTGGAAGCGTCCTCCATTCGGAAGGTTTGTTTTAATTGAGGAATGTCCTCCAAACACCAGCTCAAATGCAAACCGAACAGTTCGGGATGCGTATGACAAATGGATAAAGGAAAATGACAAATCCCGAGTGTACATTCTAGCTAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGAGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCATCCTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGTCGTATGAAAGAAGGGACCTCAGTTAGAGAACTTGTCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCAAAGAGCTTCTTCCAGTTCCGCACAAATGTGGTAATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAATCCCTCTTAACGAACAAGGGCGACTAA ATGCTCGGTCTTGCGTCGCCTTGGAAGCGTCCTCCATTCGGAAGGTTTGTTTTAATTGAGGAATGTCCTCCAAACACCAGCTCAAATGCAAACCGAACAGTTCGGGATGCGTATGACAAATGGATAAAGGAAAATGACAAATCCCGAGTGTACATTCTAGCTAGCATATCTGATGTTTTGGCTAAGAAACACGATGTTATGAGTACTGCTAAAGAGATTATGGAATCTCTAAAAGGGATGTTTGGACAACCATCCTTCTCCCTTAGACATGAAGCCATAAAATACATTTACAACTGTCGTATGAAAGAAGGGACCTCAGTTAGAGAACTTGTCCTGGACATGATGGTCCATTTCAATGTGGCAGAAGAAAATGAAGCTGTCATTGATGAGAAGAGTCAAGTCAGTTTTATCATGATGTCTCTTCCAAAGAGCTTCTTCCAGTTCCGCACAAATGTGGTAATGAACAAAATAGAATATAACTTGACTGCTCTTCTCAATGAGCTACAGACTTATCAATCCCTCTTAACGAACAAGGGCGACTAA MLGLASPWKRPPFGRFVLIEECPPNTSSNANRTVRDAYDKWIKENDKSRVYILASISDVLAKKHDVMSTAKEIMESLKGMFGQPSFSLRHEAIKYIYNCRMKEGTSVRELVLDMMVHFNVAEENEAVIDEKSQVSFIMMSLPKSFFQFRTNVVMNKIEYNLTALLNELQTYQSLLTNKGD
BLAST of CmaCh17G005260 vs. TrEMBL
Match: E2GK51_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 3.7e-58 Identity = 116/165 (70.30%), Postives = 139/165 (84.24%), Query Frame = 1
BLAST of CmaCh17G005260 vs. TrEMBL
Match: E2GK52_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.5e-38 Identity = 84/127 (66.14%), Postives = 103/127 (81.10%), Query Frame = 1
BLAST of CmaCh17G005260 vs. TrEMBL
Match: W9SH28_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004989 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 3.6e-37 Identity = 82/165 (49.70%), Postives = 117/165 (70.91%), Query Frame = 1
BLAST of CmaCh17G005260 vs. TrEMBL
Match: W9RV37_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006900 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 3.9e-36 Identity = 82/165 (49.70%), Postives = 115/165 (69.70%), Query Frame = 1
BLAST of CmaCh17G005260 vs. TrEMBL
Match: W9ST61_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003432 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 9.7e-35 Identity = 82/164 (50.00%), Postives = 114/164 (69.51%), Query Frame = 1
BLAST of CmaCh17G005260 vs. NCBI nr
Match: gi|299474487|gb|ADJ18449.1| (gag/pol protein [Bryonia dioica]) HSP 1 Score: 232.6 bits (592), Expect = 5.2e-58 Identity = 116/165 (70.30%), Postives = 139/165 (84.24%), Query Frame = 1
BLAST of CmaCh17G005260 vs. NCBI nr
Match: gi|659113933|ref|XP_008456826.1| (PREDICTED: uncharacterized protein LOC103496664 [Cucumis melo]) HSP 1 Score: 214.2 bits (544), Expect = 1.9e-52 Identity = 105/165 (63.64%), Postives = 138/165 (83.64%), Query Frame = 1
BLAST of CmaCh17G005260 vs. NCBI nr
Match: gi|778697615|ref|XP_011654359.1| (PREDICTED: uncharacterized protein LOC105435361 [Cucumis sativus]) HSP 1 Score: 200.3 bits (508), Expect = 2.9e-48 Identity = 97/134 (72.39%), Postives = 117/134 (87.31%), Query Frame = 1
BLAST of CmaCh17G005260 vs. NCBI nr
Match: gi|659118732|ref|XP_008459275.1| (PREDICTED: uncharacterized protein LOC103498451 [Cucumis melo]) HSP 1 Score: 188.3 bits (477), Expect = 1.1e-44 Identity = 91/160 (56.88%), Postives = 120/160 (75.00%), Query Frame = 1
BLAST of CmaCh17G005260 vs. NCBI nr
Match: gi|659086056|ref|XP_008443743.1| (PREDICTED: uncharacterized protein LOC103487255, partial [Cucumis melo]) HSP 1 Score: 181.0 bits (458), Expect = 1.8e-42 Identity = 88/124 (70.97%), Postives = 104/124 (83.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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