CmaCh17G005100 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTCAAAGTTTGATTACGTGGCTTGCTCTATTGAAGAATCCAATGATTTGGAGATCATGACCATTGACGAATTGCAGAGTAGTCTACTAGTTCATGAAGAACGTATGCAATAACTTATTGTGGAAGAGCAGGCATTGAAGCTCGCTCTTGACAGTAGTACAAGGAGAACAAATTGTGAGGTGGCACATTTCAAGGTAGAGGACGAGGACGTGGGACATTAGGTAACAAAAGTTTTGTTGAGTGTTTTTATTGTCATGACCTTGGTCATTTTCAGTATGAATGTTCCAAGAAGTACGAGGGAAAGGAATCACAAGTTCATTTGACTGAAACTTCTGAACCGCTGCTTCTAATGACATATGTTGAAGTGATGGTAGAACAAAAGGAGGACTCAACAGGTTGTTTGTCTGAAATTGAAGCTCCAAAAGCTGTAATAACAAAAGAATGATTATTTATGATTCTTAGATTCAGACTGCAACAACCACACATGCGAATATAAAGAATTCTTTTCAAAACTAGATGAAGGCTTTCACAAGTTTGTAAAGCTAGGTGACAACTCCAACGTTGGTGTGACAGGAAAAGAATGCATTCATCTCCAAGTTAATAACATCTCCCACGTTATCACAGAGATATTTTATGTTAGATAAAAGATTGTTTTTTTCTTTTCCTTAGGTTATTCATGTTTTCATTAATTAGAGGGTTATTTGAATTAACGAAATACAGGTAGAGTGGGAGAGAGTATTTTTAGCTGGCCATTTCAGCATCTTTAGCCCCAAGATTTGTTGGCCAATTTGGCCATTTTTAGATGATAGGTTGTTTTAAATAGTCCCATCAATGAGAAACATTCTCAGTGTTTTTTCCAGCAGAATCAAATCTCAAAGTTTCTTCAGCTTTTCTGTTTTCCTTTCCTTCAAACAAAGTTTCTTGGTCAGTTTTTATTGATTTTTTCACGAGATGAATTGCTCAGTCAAAAGACAATCATTTTATGTTTCTCAATCGAAAATTAACCTCTTAATCATTGGTCAATTGAAGAAAGGCTTGACTACCCTTCACTGTGAGAGAGATCTTATCAAAGACAAGCATATCTATAAATAGGATGTTTATCCTTCTTACCAAGATTCAATCTTAGAGGATCAATGTTTTCACACTCCTGCACATAATTTGGAGAATCTTTGGCACTACCGGTATGGTCACCTAAATTTGGGAGGTCTCAAAACTCTAAAACAGATGTAGATGGTTCATGGCTTGTGAGAACTTGTATGTTCTAATTTATTATGTGAAGATTGTCCGTTGGGAAAGTAAAATAAAAGACAATTTCCACGAGAAAGTATGTGGAGAGCATCAAAGCCACTTCAACTATATATGTGGTTGAATTTCACCTATGTCAAACAACCACAAAAGGTATATTCCAACTTTATTGATGATTTCAGCAGAAAATTATGGGTGTTTTTCTTAATAAAAAAATTAGAAGCCTTCAGAATGTTCCAACTCGTCGGAATCATGAACTTAGAATGTTCCAACTCGTTCTGATTAGAGTGATCCTGATGAGTTCTGAAGCCTTAAGGGAGGGAATGTTGCAAAAGTTTTAGTGTTTTATGTAGGAGATTTGGAGGATAGAAAAATTATGGGTAGTTTTACGTCACAGGAGCTGTATCATGATCCCGACGACTTCAATCTGGTGATGTGTGTGAACGTCAAAGGCATCGCATTAGGCATAAAGCACGCGACGTGTGTGATGATACCCAAAGCTCCCAGTTGCATAATCTCGACTGCTAGCGTGGCAAGCGTTTCAGAAGGAATGGGTCCACACGCCTACACAACATCCAAACATGCCATTGTCGGCCTCACTAAGAACACTGTCTGCGAACTTGGCCGCTATGGTATACGTGTCAACTGCATTTCGCCGTTCGGAGTTGCCACGTTGATGCTTGTGAACGCGTGGAGGGATGACAAAAACGAGTTTATGAACTTCGGGATTCCGTCGCCGGCTGAGGTGGACCAAATAGAGGAGTTCATTAGGGGTTTGGACAATCTTAAGGACCCCAATGAAGCCTTTTGGGGAACCCAAAGCAAAGCCATGAGAATTTATGTTCGGAATGGACAATATCATAGCATTAGTGTGGAGATCTATAATTTCTAA ATGACTTCAAAGTTTGATTACGTGGCTTGCTCTATTGAAGAATCCAATGATTTGGAGATCATGACCATTGACGAATTGCAGAGTAGTCTACTAGTTCATGAAGAACGAGATTTGGAGGATAGAAAAATTATGGGTAGTTTTACGTCACAGGAGCTGTATCATGATCCCGACGACTTCAATCTGGTGATGTGTGTGAACGTCAAAGGCATCGCATTAGGCATAAAGCACGCGACGTGTGTGATGATACCCAAAGCTCCCAGTTGCATAATCTCGACTGCTAGCGTGGCAAGCGTTTCAGAAGGAATGGGTCCACACGCCTACACAACATCCAAACATGCCATTGTCGGCCTCACTAAGAACACTGTCTGCGAACTTGGCCGCTATGGTATACGTGTCAACTGCATTTCGCCGTTCGGAGTTGCCACGTTGATGCTTGTGAACGCGTGGAGGGATGACAAAAACGAGTTTATGAACTTCGGGATTCCGTCGCCGGCTGAGGTGGACCAAATAGAGGAGTTCATTAGGGGTTTGGACAATCTTAAGGACCCCAATGAAGCCTTTTGGGGAACCCAAAGCAAAGCCATGAGAATTTATGTTCGGAATGGACAATATCATAGCATTAGTGTGGAGATCTATAATTTCTAA ATGACTTCAAAGTTTGATTACGTGGCTTGCTCTATTGAAGAATCCAATGATTTGGAGATCATGACCATTGACGAATTGCAGAGTAGTCTACTAGTTCATGAAGAACGAGATTTGGAGGATAGAAAAATTATGGGTAGTTTTACGTCACAGGAGCTGTATCATGATCCCGACGACTTCAATCTGGTGATGTGTGTGAACGTCAAAGGCATCGCATTAGGCATAAAGCACGCGACGTGTGTGATGATACCCAAAGCTCCCAGTTGCATAATCTCGACTGCTAGCGTGGCAAGCGTTTCAGAAGGAATGGGTCCACACGCCTACACAACATCCAAACATGCCATTGTCGGCCTCACTAAGAACACTGTCTGCGAACTTGGCCGCTATGGTATACGTGTCAACTGCATTTCGCCGTTCGGAGTTGCCACGTTGATGCTTGTGAACGCGTGGAGGGATGACAAAAACGAGTTTATGAACTTCGGGATTCCGTCGCCGGCTGAGGTGGACCAAATAGAGGAGTTCATTAGGGGTTTGGACAATCTTAAGGACCCCAATGAAGCCTTTTGGGGAACCCAAAGCAAAGCCATGAGAATTTATGTTCGGAATGGACAATATCATAGCATTAGTGTGGAGATCTATAATTTCTAA MTSKFDYVACSIEESNDLEIMTIDELQSSLLVHEERDLEDRKIMGSFTSQELYHDPDDFNLVMCVNVKGIALGIKHATCVMIPKAPSCIISTASVASVSEGMGPHAYTTSKHAIVGLTKNTVCELGRYGIRVNCISPFGVATLMLVNAWRDDKNEFMNFGIPSPAEVDQIEEFIRGLDNLKDPNEAFWGTQSKAMRIYVRNGQYHSISVEIYNF
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.0e-36 Identity = 80/128 (62.50%), Postives = 92/128 (71.88%), Query Frame = 1
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33 Identity = 74/143 (51.75%), Postives = 94/143 (65.73%), Query Frame = 1
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: ZERSY_ZINZE (Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22 Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 1
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.0e-20 Identity = 51/86 (59.30%), Postives = 60/86 (69.77%), Query Frame = 1
BLAST of CmaCh17G005100 vs. Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.2e-20 Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TrEMBL
Match: A0A0A0LF57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G730750 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50 Identity = 108/189 (57.14%), Postives = 138/189 (73.02%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TrEMBL
Match: A0A0B2S1S9_GLYSO (Sex determination protein tasselseed-2 OS=Glycine soja GN=glysoja_001174 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 8.2e-49 Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TrEMBL
Match: K7MTQ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G209200 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 8.2e-49 Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TrEMBL
Match: A0A0B2RCD6_GLYSO (Sex determination protein tasselseed-2 OS=Glycine soja GN=glysoja_005272 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 5.3e-48 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TrEMBL
Match: K7LGJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G279800 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 5.3e-48 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT3G51680.1 (AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 154.8 bits (390), Expect = 5.8e-38 Identity = 80/128 (62.50%), Postives = 92/128 (71.88%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT1G52340.1 (AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 99.4 bits (246), Expect = 2.9e-21 Identity = 51/108 (47.22%), Postives = 70/108 (64.81%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT3G26770.1 (AT3G26770.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 95.1 bits (235), Expect = 5.5e-20 Identity = 57/172 (33.14%), Postives = 91/172 (52.91%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT3G42960.1 (AT3G42960.1 TAPETUM 1) HSP 1 Score: 91.7 bits (226), Expect = 6.1e-19 Identity = 65/170 (38.24%), Postives = 88/170 (51.76%), Query Frame = 1
BLAST of CmaCh17G005100 vs. TAIR10
Match: AT3G26760.1 (AT3G26760.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 89.4 bits (220), Expect = 3.0e-18 Identity = 41/97 (42.27%), Postives = 62/97 (63.92%), Query Frame = 1
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|449439827|ref|XP_004137687.1| (PREDICTED: short-chain dehydrogenase reductase 2a [Cucumis sativus]) HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50 Identity = 108/189 (57.14%), Postives = 138/189 (73.02%), Query Frame = 1
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|659083428|ref|XP_008442351.1| (PREDICTED: short-chain dehydrogenase reductase 2a [Cucumis melo]) HSP 1 Score: 204.5 bits (519), Expect = 1.8e-49 Identity = 107/189 (56.61%), Postives = 137/189 (72.49%), Query Frame = 1
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|734420170|gb|KHN40676.1| (Sex determination protein tasselseed-2 [Glycine soja]) HSP 1 Score: 201.8 bits (512), Expect = 1.2e-48 Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 1
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|356568176|ref|XP_003552289.1| (PREDICTED: short-chain dehydrogenase reductase 2a-like [Glycine max]) HSP 1 Score: 201.8 bits (512), Expect = 1.2e-48 Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 1
BLAST of CmaCh17G005100 vs. NCBI nr
Match: gi|734396229|gb|KHN29548.1| (Sex determination protein tasselseed-2 [Glycine soja]) HSP 1 Score: 199.1 bits (505), Expect = 7.6e-48 Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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