CmaCh17G005090 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAAGAAGCTAGCACACTTGGAGCAATGGTGGTCCTTTTGTTAGCAGTCAATTTGCAGGGCTTTATTGGAGTTACAAGGGCAGATGATGACTACAATTCACCGATATGGGACAGGTGGCTAGACGAAGATAGAGCTTACTATTTAAGACCGTGCTTGAATCTAATGAAGAGTGCGAAATGTCAAGTGCAACTCTATAATAATTACTTCAATCTTAGTAAAGAGGAATTGGACTTGAATTGTTGCGTTTTCGTCAAAGTCATGGGAAAGAAGTGTACTCTTAACTTTGTGGGTTGGTTTGACTATCCAATTTTTGAAATTTATAAGCCTAACCCTATGAAGCTCTACAAAAGATGTATTGCAAGGCTTTCTTCGTCCATTCCACCTGTGCCACTATAATCTTGAAATGATAGATTAATTCTTATGATTTATTAATAATAAACTTGATAACCTTAAAAGTTTCTATCTTTTTAATTTTTCAATTTAATCTCTTGTTTTTATTTATATTTAAATAGAATATGATCTCAATCTTACTCACGGAAGATAAAATTAAAATCTTAAATAACAACGTTTAACCACTTTAGATGCTTATATTGGTAAATTTAATGAATTTTCAAACATGTTGTAACGGTTAGAAATTATAGATCTCCACACTAATGCTATGATATTGTCCATTCCGAACATAAATTCTCATGGCTTTGCTTTGGGTTCCCCAAAAGGCTTCATTGGGGTCCTTAAGATTGTCCAAACCCCTAATGAACTCCTCTATTTGGTCCACCTCAGCCGGCGACGGAATCCCGAAGTTCATAAACTCGTTTTTGTCATCCCTCCACGCGTTCACAAGCATCAACGTGGCAACTCCGAACGGCGAAATGCAGTTGACACGTATACCATAG ATGGCAAAAGAAGCTAGCACACTTGGAGCAATGGTGGTCCTTTTGTTAGCAGTCAATTTGCAGGGCTTTATTGGAGTTACAAGGGCAGATGATGACTACAATTCACCGATATGGGACAGGTGGCTAGACGAAGATAGAGCTTACTATTTAAGACCGTGCTTGAATCTAATGAAGAGTGCGAAATGTCAAGTGCAACTCTATAATAATTACTTCAATCTTAGTAAAGAGGAATTGGACTTGAATTGTTGCGTTTTCGTCAAAGTCATGGGAAAGAAGTGTACTCTTAACTTTGTGGCCGGCGACGGAATCCCGAAGTTCATAAACTCGTTTTTGTCATCCCTCCACGCGTTCACAAGCATCAACGTGGCAACTCCGAACGGCGAAATGCAGTTGACACGTATACCATAG ATGGCAAAAGAAGCTAGCACACTTGGAGCAATGGTGGTCCTTTTGTTAGCAGTCAATTTGCAGGGCTTTATTGGAGTTACAAGGGCAGATGATGACTACAATTCACCGATATGGGACAGGTGGCTAGACGAAGATAGAGCTTACTATTTAAGACCGTGCTTGAATCTAATGAAGAGTGCGAAATGTCAAGTGCAACTCTATAATAATTACTTCAATCTTAGTAAAGAGGAATTGGACTTGAATTGTTGCGTTTTCGTCAAAGTCATGGGAAAGAAGTGTACTCTTAACTTTGTGGCCGGCGACGGAATCCCGAAGTTCATAAACTCGTTTTTGTCATCCCTCCACGCGTTCACAAGCATCAACGTGGCAACTCCGAACGGCGAAATGCAGTTGACACGTATACCATAG MAKEASTLGAMVVLLLAVNLQGFIGVTRADDDYNSPIWDRWLDEDRAYYLRPCLNLMKSAKCQVQLYNNYFNLSKEELDLNCCVFVKVMGKKCTLNFVAGDGIPKFINSFLSSLHAFTSINVATPNGEMQLTRIP
BLAST of CmaCh17G005090 vs. TrEMBL
Match: A0A0A0KEB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G054340 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-29 Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 1
BLAST of CmaCh17G005090 vs. TrEMBL
Match: A0A0A0KQ41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G381840 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-19 Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 1
BLAST of CmaCh17G005090 vs. TrEMBL
Match: A0A0A0L535_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008300 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 5.2e-17 Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 1
BLAST of CmaCh17G005090 vs. NCBI nr
Match: gi|700190907|gb|KGN46111.1| (hypothetical protein Csa_6G054340 [Cucumis sativus]) HSP 1 Score: 137.1 bits (344), Expect = 2.3e-29 Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 1
BLAST of CmaCh17G005090 vs. NCBI nr
Match: gi|700195802|gb|KGN50979.1| (hypothetical protein Csa_5G381840 [Cucumis sativus]) HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19 Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 1
BLAST of CmaCh17G005090 vs. NCBI nr
Match: gi|700200589|gb|KGN55722.1| (hypothetical protein Csa_3G008300 [Cucumis sativus]) HSP 1 Score: 95.5 bits (236), Expect = 7.5e-17 Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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