CmaCh15G009490 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G009490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ELL-associated factor, putative
Location	Cma_Chr15 : 5094311 .. 5097329 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGGGACCCACCACTCGTATTTTGTACTTCCACTTTCATTCGCCCCTTTGCTTTCTCCAGCAATGGCGAACAACAACAAAGAAGAGCCGAAGACGGCGCCCCAGCCCGATCGATGGTATGATCTGTCTCTAGGTCCTTCATTCAACAACGAATCCTCCAACAAATTTTGCACTCTCCGATGTAAGTCATTCCAATTTATTCCAAATCTAAAATCAAGACACAATTGGTGTGAGTTTCCTTTCCCGCGAAACTGCGGGATGTGCGAAATCAGTTTTTGTTTTTGTCTTTGTTTTTTTCTTTTCCCCCTCAACCGTCAAATCGTTTGAATTGTTTGTCCATTGCGGTTTTAGATGAATTTAAACCCGCGTCGATCGATAAAACGAAACCGGGATCGCTGAAGAAGACCAAGGAAAATAGGGTTACTATTGAATTTCAGAACAATCAATTGGGGAAACCTAATGTGGCGTTTGTTGGTAGTAGTGAGGATTACAAGGAGAATGATGCCGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAGCAGCTTCGGCACCTTCGTCAGCCGGGCGAATCTTCTGCCGCTGGCGTGGCCGCCGCCTCGTCCACCTCCGCCTCTGCCCTTCATTCTTTGACGCCGCCGGAGCCTCGGCTATCTCCTCCAGCGGCTAAAGTTCCCAAACCCATGCATATGGGCCGAGGCAGCTTTCCGTCGGTGCTAGTAAGAACTCTTCATGATTAATTTCCTATTGCATAAACTTATATCAAAAAGAAAAAGCATTTGAATTTTGGGAATTTCCATGCTCAAGAAGTTTCTTTAAATCTTTCTTGCTTCTGTCAGGCAAGAATCACATATTCATTTGAAGTGTTTTACTCTTCTTAACAAATGAGAAGCATAGATTGAGAAAATATGACTAGTTAACAATTTCATTTTGAAAAGTGCAGCTAACCCTTAGACTAGGTGAAGTATTGGTGTACTTTTATATTCCAGCTAATTTTCAATGAACTTTTTTTTTTTTCTATCCTTCTCCCTGTTCATTGTTCTAATACTTTCTGCTGATTGTATAACTATGCCCTTTAGTTCTAATACGTGCTGCACTTACAGGTAGAGGTGGAAAAGATAGATATTGGAGAGCCAGGAAATACAGGTCAATATGCTTTTCTGGTTCTATTATATTTTTTCTCAATTGGTATGTACTTTTGTTGCAATCAAGTGGCTGTCCATCGCCATGATATTTGTTGATTGTGAAAAGATTTCAGAGCAAACACTACCTATGATTTTGAAATTGGATCCCATACCTACTTTATCCATTGTGGTTGTTTCTGCCTGGTGGGTATCTTAGTTTACAGCATGCAGTTTTTTAATTTCTTTTAAATGAATGAAACAAGAGGCAATGCAAAAATAATGAGAGAGAAAGCCCAACAAAAGGATCTCTGTTGGTCACACATAAAACTTAGAAAAGGGCTTTGTTAAGAATGAAAGAATAATGACAAATTACGTTTGTTACAGAGATCCAAAGAAAGTAGCGATGCAGTTAGTCTGCATCTGTATACCTAAAGCCAATGTGAGAGCTGTTTTATTCCTCATAGGGGTGGATCTTAAGTTCTTGAGTGAGATATGTTAGTATGATGCAACTTTTTTTCTTTACCTCAAATCTTATTATGGGAAGATCACTGCTATTCAGTCAGGATGTAACGTTGTCTGTAAGATCCCGTCCTTACAGGCCTCTTGCATCATTCCTAACCAGAGAAACGTTAAGAATAAATGCATTTGATTGACCATTTGTCTGATAATTTTGAACTATCTTCTAAATGTATTTTTCTTCTTTGTTTCTAGATTTTTGTTTAATTTTTATTGTCAATGATTAGATAGTATGGCCCTAAATATTGAACAACCTGTTTTACTCATGAGTCAAGCCGAACAACATTTATCTTTAGTAGAATTTATTGCTTTAATTTGTACAATGATGTTGAAATCTTGTCGCTAGATGTCTTTTAATTTCTTTGTTAGAACACCATTCTTCCCAGGAATTAGTACTCCTTTCTCGAAAATTCAGATTTAGTCATACAATATTGTTCTTAATCGAACTTCCGAATGCATTATGAAATGAAATATTAACATTTCAGCAACTGGTTCGTGTAGTCTTTCAACTGGACGGTTTTAGTTAGAAAGTGCATCTAGTGTAACATTTCTTTTTGTAATTAGTAGGGCCTCATGCAACAAATTGGCATTTGTTTTTTGTTCCATTAGCAGCAACTTTAACCGTTATCAGGGGTTCATTTGTGTATGGTTTTTTAATAACATTTTTCACTCCTATACTTATTTCCCCCCTACATTTTGTTGGCTGAGAAACAGTAGAATCTTGATCTACAGAATGTGGTTCTTCATTAGCTACATAGTTCCTGTCTTATGTTCTCTGACGATTCTTCGTGTTTCAACTCTGTAAGGGCTGCTGTTTTGATTATTATCTTTTTCTTACCTCTTGTCTAAAATATGTTTATGCTCATTGCAGGTGCAAAATCTGTTGTTGCTAGTAAAGGGCCTGCTGATTACTCATCAGATCCACCAAACGTATCTGCTCCCTCTCCAGGCCCTAAGAATGATGATGAGCATCAAGATATAGATATTGATGATATTTTTGGGTCTGTTTCATCTGATGATGAAAATAATGCTGAAGAAGATAAAGTTGACGCTGGATTCGATATAAATGTACCACATCATAATGATACCGACGATGAGATTGCTGATGTGGATGATAGTGGTGACGAAGCTGAGAAGGGACCTAATGCTGCGGAAGCTCTCAGAGCTCAGGTTAATGCAGAGGGCAGGGAGGGGCCTACAGCTGCAGCAGCCCTGAGAGCTCAGGTTAATGCAGAGGGCAGGGACGAGCAGAGTTCGAGTTCTAGTAGCAGTGAATCAGGCAGTGGCAGCAGCAGTGGAAGTAGCAGTGGCAGCAGTGACAGTGAAGGAACTGATGAGGATTCGGTTACCTCAATCTGA

mRNA sequence

CTGGGACCCACCACTCGTATTTTGTACTTCCACTTTCATTCGCCCCTTTGCTTTCTCCAGCAATGGCGAACAACAACAAAGAAGAGCCGAAGACGGCGCCCCAGCCCGATCGATGGTATGATCTGTCTCTAGGTCCTTCATTCAACAACGAATCCTCCAACAAATTTTGCACTCTCCGATATGAATTTAAACCCGCGTCGATCGATAAAACGAAACCGGGATCGCTGAAGAAGACCAAGGAAAATAGGGTTACTATTGAATTTCAGAACAATCAATTGGGGAAACCTAATGTGGCGTTTGTTGGTAGTAGTGAGGATTACAAGGAGAATGATGCCGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAGCAGCTTCGGCACCTTCGTCAGCCGGGCGAATCTTCTGCCGCTGGCGTGGCCGCCGCCTCGTCCACCTCCGCCTCTGCCCTTCATTCTTTGACGCCGCCGGAGCCTCGGCTATCTCCTCCAGCGGCTAAAGTTCCCAAACCCATGCATATGGGCCGAGGCAGCTTTCCGTCGGTGCTAGTAGAGGTGGAAAAGATAGATATTGGAGAGCCAGGAAATACAGGTGCAAAATCTGTTGTTGCTAGTAAAGGGCCTGCTGATTACTCATCAGATCCACCAAACGTATCTGCTCCCTCTCCAGGCCCTAAGAATGATGATGAGCATCAAGATATAGATATTGATGATATTTTTGGGTCTGTTTCATCTGATGATGAAAATAATGCTGAAGAAGATAAAGTTGACGCTGGATTCGATATAAATGTACCACATCATAATGATACCGACGATGAGATTGCTGATGTGGATGATAGTGGTGACGAAGCTGAGAAGGGACCTAATGCTGCGGAAGCTCTCAGAGCTCAGGTTAATGCAGAGGGCAGGGAGGGGCCTACAGCTGCAGCAGCCCTGAGAGCTCAGGTTAATGCAGAGGGCAGGGACGAGCAGAGTTCGAGTTCTAGTAGCAGTGAATCAGGCAGTGGCAGCAGCAGTGGAAGTAGCAGTGGCAGCAGTGACAGTGAAGGAACTGATGAGGATTCGGTTACCTCAATCTGA

Coding sequence (CDS)

ATGGCGAACAACAACAAAGAAGAGCCGAAGACGGCGCCCCAGCCCGATCGATGGTATGATCTGTCTCTAGGTCCTTCATTCAACAACGAATCCTCCAACAAATTTTGCACTCTCCGATATGAATTTAAACCCGCGTCGATCGATAAAACGAAACCGGGATCGCTGAAGAAGACCAAGGAAAATAGGGTTACTATTGAATTTCAGAACAATCAATTGGGGAAACCTAATGTGGCGTTTGTTGGTAGTAGTGAGGATTACAAGGAGAATGATGCCGTTTTGTTTTTTGATGGCGAGACATTCCGGTTGGAGCGGCTGCACCGGGCGGTCAAGCAGCTTCGGCACCTTCGTCAGCCGGGCGAATCTTCTGCCGCTGGCGTGGCCGCCGCCTCGTCCACCTCCGCCTCTGCCCTTCATTCTTTGACGCCGCCGGAGCCTCGGCTATCTCCTCCAGCGGCTAAAGTTCCCAAACCCATGCATATGGGCCGAGGCAGCTTTCCGTCGGTGCTAGTAGAGGTGGAAAAGATAGATATTGGAGAGCCAGGAAATACAGGTGCAAAATCTGTTGTTGCTAGTAAAGGGCCTGCTGATTACTCATCAGATCCACCAAACGTATCTGCTCCCTCTCCAGGCCCTAAGAATGATGATGAGCATCAAGATATAGATATTGATGATATTTTTGGGTCTGTTTCATCTGATGATGAAAATAATGCTGAAGAAGATAAAGTTGACGCTGGATTCGATATAAATGTACCACATCATAATGATACCGACGATGAGATTGCTGATGTGGATGATAGTGGTGACGAAGCTGAGAAGGGACCTAATGCTGCGGAAGCTCTCAGAGCTCAGGTTAATGCAGAGGGCAGGGAGGGGCCTACAGCTGCAGCAGCCCTGAGAGCTCAGGTTAATGCAGAGGGCAGGGACGAGCAGAGTTCGAGTTCTAGTAGCAGTGAATCAGGCAGTGGCAGCAGCAGTGGAAGTAGCAGTGGCAGCAGTGACAGTGAAGGAACTGATGAGGATTCGGTTACCTCAATCTGA

Protein sequence

MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGESSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEPGNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNAEEDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAALRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI

Homology

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BLAST of CmaCh15G009490 vs. Swiss-Prot
Match: EAF_DROME (Ell-associated factor Eaf OS=Drosophila melanogaster GN=Eaf PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.8e-06
Identity = 29/95 (30.53%), Postives = 57/95 (60.00%), Query Frame = 1


Query: 20  DLSLGPSFN-NESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTIEFQNNQ-LGKPNV 79
           +L LG +FN   +S  F T++Y+FKPAS+D ++  S+     N+VT+   N++  G P+ 
Sbjct: 22  ELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVTVPNSESSGVPHT 81

Query: 80  AFVGSSEDYKENDAVLFFDGET--FRLERLHRAVK 111
            + G+  +Y + + ++ +D ET    +E+L+  ++
Sbjct: 82  VYKGNQREYAK-ECLMIYDKETGAITIEKLNHNIQ 115

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BLAST of CmaCh15G009490 vs. Swiss-Prot
Match: EAF_DROSE (Ell-associated factor Eaf OS=Drosophila sechellia GN=Eaf PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.9e-06
Identity = 35/118 (29.66%), Postives = 67/118 (56.78%), Query Frame = 1


Query: 20  DLSLGPSFN-NESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTIEFQNNQ-LGKPNV 79
           +L LG +FN   +S  F T++Y+FKPAS+D ++  S+     N+VT+   N++  G P+ 
Sbjct: 22  ELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMASVDVGSNNQVTVTVPNSESSGVPHT 81

Query: 80  AFVGSSEDYKENDAVLFFDGET--FRLERLHR--AVKQLRH------LRQPGESSAAG 126
            + G+  +Y + + ++ +D ET    +E+L+    VK+ R+      ++ PG++   G
Sbjct: 82  VYKGNQREYAK-ECLMIYDKETGAITIEKLNHNIQVKKTRNEVSNKSVQLPGQNMGQG 138

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BLAST of CmaCh15G009490 vs. Swiss-Prot
Match: EAF_DROVI (Ell-associated factor Eaf OS=Drosophila virilis GN=Eaf PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.9e-06
Identity = 32/99 (32.32%), Postives = 55/99 (55.56%), Query Frame = 1


Query: 16  DRWYDLSLGPSFN-NESSNKFCTLRYEFKPASIDKTKPGSLKKTKENRVTIEFQN-NQLG 75
           D   +L LG +FN   +S  F T++Y+FKPAS+D ++  ++     N+VT+   N    G
Sbjct: 19  DEVRELKLGATFNPKNTSTAFHTIKYDFKPASVDTSRMATVDVGSNNQVTVTVPNLESSG 78

Query: 76  KPNVAFVGSSEDYKENDAVLFFDGET--FRLERLHRAVK 111
            P   + G+ + Y + + ++ FD ET    LERL+  ++
Sbjct: 79  VPQTVYKGNHKKYTK-ECLIIFDKETGAITLERLNHNIQ 116

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BLAST of CmaCh15G009490 vs. TrEMBL
Match: A0A0A0KM56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G210030 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 3.5e-134
Identity = 280/355 (78.87%), Postives = 299/355 (84.23%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MANN  EEPKTAPQPDRWY+LSLGPSF +ESSNKFCT RYEFKPASIDKTKPG LKKTKE
Sbjct: 1   MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQN+Q GKPN++FVGSSEDYKENDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61  NRVTVEFQNSQPGKPNLSFVGSSEDYKENDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120

Query: 121 SSA--------AGVA--AASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLV 180
           S+A        AGVA  AA+ T+AS LHSLTPPEPRLSPP  KV KPMHMGR SFP++ V
Sbjct: 121 SAAAVAAPATTAGVAAPAAAPTTASVLHSLTPPEPRLSPPVTKVSKPMHMGRSSFPTMPV 180

Query: 181 EVEKIDIGEPGNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVS 240
           EVE+IDIGEPGN GAK+ VASKG  +YSSDPPNVS  SPG KNDDEHQDIDIDDIFGSVS
Sbjct: 181 EVERIDIGEPGNAGAKT-VASKGLTNYSSDPPNVSVSSPGLKNDDEHQDIDIDDIFGSVS 240

Query: 241 SDDENNAEEDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRE 300
           SDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR 
Sbjct: 241 SDDGNNAEEERVEPGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA 300

Query: 301 GPTAAAALRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 346
                             EQSSSSSSS SGSGSSSGSSS SSDSE +DEDSVTSI
Sbjct: 301 ------------------EQSSSSSSSGSGSGSSSGSSSASSDSEASDEDSVTSI 336

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BLAST of CmaCh15G009490 vs. TrEMBL
Match: W9RR55_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025884 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.6e-105
Identity = 242/349 (69.34%), Postives = 271/349 (77.65%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           M NN KEEPKTAPQ DRWY+L+LGPSF +E+SNK+CTLRYEFKPASIDKTKPGSL+KTKE
Sbjct: 1   MVNNAKEEPKTAPQSDRWYNLTLGPSFKDEASNKYCTLRYEFKPASIDKTKPGSLRKTKE 60

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EF NNQLGKP V F GSSEDYK NDAVL FDGETFR+ERLHR+V  LRH RQPGE
Sbjct: 61  NRVTVEFHNNQLGKPKVTFDGSSEDYK-NDAVLLFDGETFRMERLHRSVNHLRHRRQPGE 120

Query: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
           S+    AAASS+S +AL S    EPRLS P AK PK +H+GR +FP+V VEVE+IDIG  
Sbjct: 121 SA----AAASSSSVAAL-SGPAIEPRLS-PVAKAPKTIHVGRSAFPAVPVEVERIDIGVS 180

Query: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSPGPKND----DEHQDIDIDDIFGSVSSDDENN 240
            N GAKS  ASKG ADYSSDPPN S+ +P PKN+    DEHQDIDI+DIFG+   +D  N
Sbjct: 181 ENPGAKS--ASKGVADYSSDPPNTSSVAPDPKNENEEVDEHQDIDIEDIFGAELPEDV-N 240

Query: 241 AEEDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAA 300
           A EDK + GFDINVPH NDTDDEIADVDDSGDE +KGPNAAEALRAQVNAE R+  T+ +
Sbjct: 241 AAEDKANVGFDINVPHQNDTDDEIADVDDSGDEVDKGPNAAEALRAQVNAEERDEQTSTS 300

Query: 301 ALRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 346
                         SSSS S  SGSGS SGS S SSDSEG+DEDSV SI
Sbjct: 301 --------------SSSSGSGSSGSGSGSGSGS-SSDSEGSDEDSVNSI 324

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BLAST of CmaCh15G009490 vs. TrEMBL
Match: U5FYP4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12520g PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98
Identity = 222/347 (63.98%), Postives = 257/347 (74.06%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MANN+KEEPK+APQPDRWY+L+LGPSF  +SSNKFCTLRYEFKPASIDKTKPG   K K+
Sbjct: 27  MANNSKEEPKSAPQPDRWYNLALGPSFKEQSSNKFCTLRYEFKPASIDKTKPGLFHKNKD 86

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRV++EFQNNQLGK  V F GSSEDYKENDAVLFFDG+TFRLERLHR+VKQLRHLR PGE
Sbjct: 87  NRVSVEFQNNQLGKSKVTFEGSSEDYKENDAVLFFDGQTFRLERLHRSVKQLRHLRLPGE 146

Query: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
           S+AA         ASA   L    P LSPP  K  KP+ +GR +FP+V VEVE+ID+GEP
Sbjct: 147 SAAA---------ASAQSMLAVEAPGLSPPVGKGAKPVQIGRSAFPTVPVEVERIDVGEP 206

Query: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDD--EHQDIDIDDIFGSVSSDDENNAE 240
              G K+  A++G  ++ +  PNVS  SP PKND+  EHQDIDI+DIFG+ S DD  NA 
Sbjct: 207 HVLGTKA--ANEGITEHPTHVPNVSTSSPSPKNDEAEEHQDIDIEDIFGAGSPDD-GNAT 266

Query: 241 EDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAAL 300
           E+KVD  FD++ P  N+TDDEIADVDD+GDEA+KG NAAEALRAQ NA+ R         
Sbjct: 267 EEKVDVDFDMHAPQQNNTDDEIADVDDNGDEADKGLNAAEALRAQENADER--------- 326

Query: 301 RAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 346
                    DEQ+SSSSSS     S SGSSS SSDSEG+DEDSV SI
Sbjct: 327 ---------DEQTSSSSSSSGSGSSGSGSSSSSSDSEGSDEDSVNSI 343

[Close]

BLAST of CmaCh15G009490 vs. TrEMBL
Match: A9PG79_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 4.1e-98
Identity = 221/347 (63.69%), Postives = 256/347 (73.78%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MANN+KEEPK+APQPDRWY+L+LGPSF  +SSNKFCTLRYEFKPASIDKTKPG   K K+
Sbjct: 1   MANNSKEEPKSAPQPDRWYNLALGPSFKEQSSNKFCTLRYEFKPASIDKTKPGLFHKNKD 60

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRV++EFQNNQLGK    F GSSEDYKENDAVLFFDG+TFRLERLHR+VKQLRHLR PGE
Sbjct: 61  NRVSVEFQNNQLGKSKFTFEGSSEDYKENDAVLFFDGQTFRLERLHRSVKQLRHLRLPGE 120

Query: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
           S+AA         ASA   L    P LSPP  K  KP+ +GR +FP+V VEVE+ID+GEP
Sbjct: 121 SAAA---------ASAQSMLAVEAPGLSPPVGKGAKPVQIGRSAFPTVPVEVERIDVGEP 180

Query: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDD--EHQDIDIDDIFGSVSSDDENNAE 240
              G K+  A++G  ++ +  PNVS  SP PKND+  EHQDIDI+DIFG+ S DD  NA 
Sbjct: 181 HVLGTKA--ANEGITEHPTHVPNVSTSSPSPKNDEAEEHQDIDIEDIFGAGSPDD-GNAT 240

Query: 241 EDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAAL 300
           E+KVD  FD++ P  N+TDDEIADVDD+GDEA+KG NAAEALRAQ NA+ R         
Sbjct: 241 EEKVDVDFDMHAPQQNNTDDEIADVDDNGDEADKGLNAAEALRAQENADER--------- 300

Query: 301 RAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 346
                    DEQ+SSSSSS     S SGSSS SSDSEG+DEDSV SI
Sbjct: 301 ---------DEQTSSSSSSSGSGSSGSGSSSSSSDSEGSDEDSVNSI 317

[Close]

BLAST of CmaCh15G009490 vs. TrEMBL
Match: B9SYJ2_RICCO (ELL-associated factor, putative OS=Ricinus communis GN=RCOM_1288580 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.7e-96
Identity = 221/348 (63.51%), Postives = 262/348 (75.29%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSN-KFCTLRYEFKPASIDKTKPGSLKKTK 60
           MA+N+KEEPKT PQPDRWY+L+LGPSF +++SN K+CTLRYEFKPASIDKTK G+L K K
Sbjct: 1   MAHNSKEEPKTGPQPDRWYNLTLGPSFKDDTSNNKYCTLRYEFKPASIDKTKAGTLHKNK 60

Query: 61  ENRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPG 120
           ENRV++EFQNNQLGKP V F GSSEDYKENDAVLFFDG+TFRLERLHRAVKQLRHLR PG
Sbjct: 61  ENRVSVEFQNNQLGKPKVTFEGSSEDYKENDAVLFFDGQTFRLERLHRAVKQLRHLRMPG 120

Query: 121 ESSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRG--SFPSVLVEVEKIDI 180
           ES++A  A  ++++A A   + PP PRLSPP  K  KP+H+ R   +FP + VEVE+ID+
Sbjct: 121 ESASASAAPTATSAAQAGPGIEPPPPRLSPPVGKGVKPLHVPRSTTAFPPLPVEVERIDV 180

Query: 181 GEPGNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNA 240
            +   +GAK  V SKG +++ ++ PNVS  SP PKND+    IDI+DIFGS S  D+N A
Sbjct: 181 ADSQISGAK--VPSKGISEHPTNLPNVSTSSPSPKNDEAEDHIDIEDIFGSSSPYDDNTA 240

Query: 241 EEDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAA 300
           EE K D   DI V   N+TDDEIADVDDSGDE  KG NAAEALRAQVNAE R+  T+++ 
Sbjct: 241 EE-KGDGDLDIIVSRQNETDDEIADVDDSGDEVHKGRNAAEALRAQVNAEERDEQTSSS- 300

Query: 301 LRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 346
                        SSSS S  SGSGS SGSSS SSDSEG+DEDSV SI
Sbjct: 301 -------------SSSSGSGSSGSGSGSGSSS-SSDSEGSDEDSVNSI 330

[Close]

BLAST of CmaCh15G009490 vs. TAIR10
Match: AT1G71080.1 (AT1G71080.1 RNA polymerase II transcription elongation factor)

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-67
Identity = 182/352 (51.70%), Postives = 232/352 (65.91%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           M+N++++EP TAP+ D+WYDL LG S  ++SS+KFCTLRYEFKPASIDK + GS+ K K+
Sbjct: 1   MSNHSRDEPSTAPKTDQWYDLVLGSSAKDDSSHKFCTLRYEFKPASIDKNRSGSMHKKKD 60

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRV++EFQNNQ GKP V F GSSEDYKE+DAVLFFDGE FRLERLHRAV QLRH+R PGE
Sbjct: 61  NRVSVEFQNNQPGKPKVTFEGSSEDYKESDAVLFFDGEKFRLERLHRAVTQLRHVRTPGE 120

Query: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
           S+AA              S  P E RLS P  +  K   + R   P V VEVE+I+IG+P
Sbjct: 121 SAAAS------------QSAVPVEHRLS-PVGRAAKSPQVNRSLLPDVPVEVERIEIGKP 180

Query: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSP-GPKND--DEHQDIDIDDIFGSVSSDDENNA 240
            N        S  PA+      NV A SP   KND  DEHQ+ID+ +IFGS + +++ NA
Sbjct: 181 EN--------SAEPANTG----NVPATSPVEDKNDDGDEHQEIDLVEIFGSFTPEND-NA 240

Query: 241 EEDKVDAGFDINVPHH--NDTDDEIADV-DDSGDEAEKGPNAAEALRAQVNAEGREGPTA 300
           E++  D G  +   +   + T++EIADV DDSG E EKG NAAEALRAQVNAE ++  T+
Sbjct: 241 EKENADGGEYVESLNKQLSMTEEEIADVDDDSGGEGEKGLNAAEALRAQVNAEVQKSQTS 300

Query: 301 AAALRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGT-DEDSVTSI 346
           +++  +  ++    +  S S SS SGSG  S S S S  S G+ DED V S+
Sbjct: 301 SSSSSSGSSSGSDSDGRSKSVSSGSGSGGQSSSGSSSRGSGGSDDEDEVNSV 326

[Close]

BLAST of CmaCh15G009490 vs. TAIR10
Match: AT5G38050.1 (AT5G38050.1 RNA polymerase II transcription elongation factor)

HSP 1 Score: 139.8 bits (351), Expect = 3.1e-33
Identity = 127/337 (37.69%), Postives = 173/337 (51.34%), Query Frame = 1


Query: 3   NNNKEEPKTAPQPDRWYDLSLGPSF--NNES-SNKFCTLRYEFKPASIDKTKPGSLKKTK 62
           +N+ EEPK AP+P+RWY+++LGP+   NN S S KFCTLRYEFKPASID TKPG L K+K
Sbjct: 2   DNHNEEPKIAPEPNRWYNITLGPTLLNNNHSYSPKFCTLRYEFKPASIDSTKPGLLHKSK 61

Query: 63  ENRVTIEFQNNQLGKPNVAFVGSSEDY--KENDAVLFFDGETFRLERLHRAVKQLRHLRQ 122
           +N+VT+EFQNNQL KP V F G SEDY  ++ DA+LFFDGE FRLE+LHR+VK+L+ LR 
Sbjct: 62  DNKVTLEFQNNQLNKPKVRFDGVSEDYNDRDKDAILFFDGENFRLEKLHRSVKRLKCLRV 121

Query: 123 PGESSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDI 182
           P E            SASA   +T    ++ PP  K  K  H+   +      +V   D 
Sbjct: 122 PDE------------SASASRVVT----KIVPPVEKPVKMAHIDINNPVDFEEDVNIEDD 181

Query: 183 GEPGNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVSSDDENNA 242
            E      K      G  D      +++ P P    DDE   +DI+D             
Sbjct: 182 NEEETLSRKEF--QTGGLDI-----DINLPHPAEMEDDEIAVVDIND------------- 241

Query: 243 EEDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAA 302
                    D +    N  +   A V+    E        E+ ++  +  GRE  ++ + 
Sbjct: 242 ---------DESYKGLNAAEALRAQVNAEARE--------ESRKSSSSGSGRESESSESG 280

Query: 303 LRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDS 335
           + +  +       SS+S S +SGS   + S SGS DS
Sbjct: 302 VESSGSG-----SSSTSESRKSGSEGGTASESGSRDS 280

[Close]

BLAST of CmaCh15G009490 vs. NCBI nr
Match: gi|659109657|ref|XP_008454810.1| (PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo])

HSP 1 Score: 491.9 bits (1265), Expect = 9.2e-136
Identity = 280/358 (78.21%), Postives = 299/358 (83.52%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MANN  EEPKTAPQPDRWY+LSLGPSF +ESSNKFCT RYEFKPASIDKTKPG LKKTKE
Sbjct: 1   MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61  NRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120

Query: 121 SSAA-----------GVAAASST--SASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPS 180
           S+AA           GVAA ++T  SAS LHSLTPPEPRLSPP  KV KPMHMGR SFP+
Sbjct: 121 SAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPT 180

Query: 181 VLVEVEKIDIGEPGNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFG 240
           + VEVE+IDIGEPGN GAK VVASKG  DYSSDPPN S  SPG KNDDEHQDIDIDDIFG
Sbjct: 181 MPVEVERIDIGEPGNAGAKPVVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFG 240

Query: 241 SVSSDDENNAEEDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE 300
           SVSSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Sbjct: 241 SVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE 300

Query: 301 GREGPTAAAALRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 346
           GR                   EQSSSSSSS SGSGSSSGSSS SSDSEG+DEDSVTSI
Sbjct: 301 GRA------------------EQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI 340

[Close]

BLAST of CmaCh15G009490 vs. NCBI nr
Match: gi|449460892|ref|XP_004148178.1| (PREDICTED: ELL-associated factor 2 [Cucumis sativus])

HSP 1 Score: 486.1 bits (1250), Expect = 5.0e-134
Identity = 280/355 (78.87%), Postives = 299/355 (84.23%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MANN  EEPKTAPQPDRWY+LSLGPSF +ESSNKFCT RYEFKPASIDKTKPG LKKTKE
Sbjct: 1   MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKE 60

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQN+Q GKPN++FVGSSEDYKENDAVLFFDGETFRLERLHRAV QLRHLRQPGE
Sbjct: 61  NRVTVEFQNSQPGKPNLSFVGSSEDYKENDAVLFFDGETFRLERLHRAVNQLRHLRQPGE 120

Query: 121 SSA--------AGVA--AASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLV 180
           S+A        AGVA  AA+ T+AS LHSLTPPEPRLSPP  KV KPMHMGR SFP++ V
Sbjct: 121 SAAAVAAPATTAGVAAPAAAPTTASVLHSLTPPEPRLSPPVTKVSKPMHMGRSSFPTMPV 180

Query: 181 EVEKIDIGEPGNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDDEHQDIDIDDIFGSVS 240
           EVE+IDIGEPGN GAK+ VASKG  +YSSDPPNVS  SPG KNDDEHQDIDIDDIFGSVS
Sbjct: 181 EVERIDIGEPGNAGAKT-VASKGLTNYSSDPPNVSVSSPGLKNDDEHQDIDIDDIFGSVS 240

Query: 241 SDDENNAEEDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRE 300
           SDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR 
Sbjct: 241 SDDGNNAEEERVEPGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA 300

Query: 301 GPTAAAALRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 346
                             EQSSSSSSS SGSGSSSGSSS SSDSE +DEDSVTSI
Sbjct: 301 ------------------EQSSSSSSSGSGSGSSSGSSSASSDSEASDEDSVTSI 336

[Close]

BLAST of CmaCh15G009490 vs. NCBI nr
Match: gi|703099881|ref|XP_010096766.1| (hypothetical protein L484_025884 [Morus notabilis])

HSP 1 Score: 390.2 bits (1001), Expect = 3.8e-105
Identity = 242/349 (69.34%), Postives = 271/349 (77.65%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           M NN KEEPKTAPQ DRWY+L+LGPSF +E+SNK+CTLRYEFKPASIDKTKPGSL+KTKE
Sbjct: 1   MVNNAKEEPKTAPQSDRWYNLTLGPSFKDEASNKYCTLRYEFKPASIDKTKPGSLRKTKE 60

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EF NNQLGKP V F GSSEDYK NDAVL FDGETFR+ERLHR+V  LRH RQPGE
Sbjct: 61  NRVTVEFHNNQLGKPKVTFDGSSEDYK-NDAVLLFDGETFRMERLHRSVNHLRHRRQPGE 120

Query: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
           S+    AAASS+S +AL S    EPRLS P AK PK +H+GR +FP+V VEVE+IDIG  
Sbjct: 121 SA----AAASSSSVAAL-SGPAIEPRLS-PVAKAPKTIHVGRSAFPAVPVEVERIDIGVS 180

Query: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSPGPKND----DEHQDIDIDDIFGSVSSDDENN 240
            N GAKS  ASKG ADYSSDPPN S+ +P PKN+    DEHQDIDI+DIFG+   +D  N
Sbjct: 181 ENPGAKS--ASKGVADYSSDPPNTSSVAPDPKNENEEVDEHQDIDIEDIFGAELPEDV-N 240

Query: 241 AEEDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAA 300
           A EDK + GFDINVPH NDTDDEIADVDDSGDE +KGPNAAEALRAQVNAE R+  T+ +
Sbjct: 241 AAEDKANVGFDINVPHQNDTDDEIADVDDSGDEVDKGPNAAEALRAQVNAEERDEQTSTS 300

Query: 301 ALRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 346
                         SSSS S  SGSGS SGS S SSDSEG+DEDSV SI
Sbjct: 301 --------------SSSSGSGSSGSGSGSGSGS-SSDSEGSDEDSVNSI 324

[Close]

BLAST of CmaCh15G009490 vs. NCBI nr
Match: gi|645276547|ref|XP_008243336.1| (PREDICTED: suppressor protein SRP40 [Prunus mume])

HSP 1 Score: 387.5 bits (994), Expect = 2.4e-104
Identity = 234/348 (67.24%), Postives = 276/348 (79.31%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MANN+KEEPKT PQPD WY+L+LGPSF ++SSNK+CTLRYEFKPASIDKTKPG+LKKTKE
Sbjct: 1   MANNSKEEPKTGPQPDLWYNLTLGPSFKDDSSNKYCTLRYEFKPASIDKTKPGTLKKTKE 60

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQLGKPNV F GSSEDYK+NDAVLFFDG+TFRLERLHRAVKQLRH RQPGE
Sbjct: 61  NRVTVEFQNNQLGKPNVTFKGSSEDYKDNDAVLFFDGQTFRLERLHRAVKQLRHDRQPGE 120

Query: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHM-GRGSFPSVLVEVEKIDIGE 180
           S     AA ++ S SA+      EP+LSP  +K PKP+H  GR +FP+V VEVE+ID+G 
Sbjct: 121 S-----AAGAAQSGSAV------EPQLSP-VSKGPKPIHHPGRTAFPAVQVEVERIDVGI 180

Query: 181 PGNTGAKSVVASKGPADYSSDPPNVSAPSPGPKNDD--EHQDIDIDDIFGSVSSDDENNA 240
           PGN GAKS  A+KG ADYSSD  NV+A SP PKN++  EHQDIDI+++FGSVS ++  NA
Sbjct: 181 PGNPGAKS--ANKGVADYSSDQLNVAAASPDPKNEEVEEHQDIDIEELFGSVSPEN-GNA 240

Query: 241 EEDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAA 300
            ED  +AGFDI++ + N++D+EIADVDDSGDE +KGPNAAEALRAQVNAEGRE  T+ + 
Sbjct: 241 AEDGANAGFDISMRNQNESDNEIADVDDSGDEVDKGPNAAEALRAQVNAEGREKQTSTSG 300

Query: 301 LRAQVNAEGRDEQSSSSSSSESGSGSSSGSSSGSSDSEGTDEDSVTSI 346
                         SSS S  S SGS SGSSS SSD+EG+D+DSV SI
Sbjct: 301 --------------SSSGSGSSSSGSGSGSSSSSSDNEGSDDDSVNSI 319

[Close]

BLAST of CmaCh15G009490 vs. NCBI nr
Match: gi|470122646|ref|XP_004297351.1| (PREDICTED: ELL-associated factor 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 384.8 bits (987), Expect = 1.6e-103
Identity = 233/348 (66.95%), Postives = 264/348 (75.86%), Query Frame = 1


Query: 1   MANNNKEEPKTAPQPDRWYDLSLGPSFNNESSNKFCTLRYEFKPASIDKTKPGSLKKTKE 60
           MA+N KEEPKTAPQPDRWY+L+LGPSF +ESS+KFCTLRYEFKPASIDKTKPGSLKKTK+
Sbjct: 1   MASNAKEEPKTAPQPDRWYNLTLGPSFKDESSSKFCTLRYEFKPASIDKTKPGSLKKTKD 60

Query: 61  NRVTIEFQNNQLGKPNVAFVGSSEDYKENDAVLFFDGETFRLERLHRAVKQLRHLRQPGE 120
           NRVT+EFQNNQLGKPNV F G+SEDYK+NDAVLFFDG+TFRLERLHRAVKQLRH RQPGE
Sbjct: 61  NRVTVEFQNNQLGKPNVLFKGNSEDYKDNDAVLFFDGQTFRLERLHRAVKQLRHDRQPGE 120

Query: 121 SSAAGVAAASSTSASALHSLTPPEPRLSPPAAKVPKPMHMGRGSFPSVLVEVEKIDIGEP 180
           S   G+               P EP+LSPP  KV K MH  R SFP+V VEVE+IDIG P
Sbjct: 121 S--VGI---------------PLEPQLSPPPGKVAKTMHPSRNSFPAVPVEVERIDIGVP 180

Query: 181 GNTGAKSVVASKGPADYSSDPPNVSAPSPGPKND--DEHQDIDIDDIFGSVSSDDENNAE 240
            N+G KS  ASKG AD+S D PNVSA SP PK+D  +EHQDIDID++FGS S +D N A 
Sbjct: 181 ENSGTKS--ASKGVADHSYDQPNVSAASPDPKDDEVEEHQDIDIDELFGSGSPEDGNAAA 240

Query: 241 EDKVDAGFDINVPHHNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGREGPTAAAAL 300
           EDK +A FD+N+PH N+ DDEIADVD SGDE +KGPNAAEALRAQVNAE           
Sbjct: 241 EDKSNAEFDVNMPHQNEIDDEIADVDVSGDEVDKGPNAAEALRAQVNAE----------- 300

Query: 301 RAQVNAEGRDEQSSSSSSSESGSGSSSGS--SSGSSDSEGTDEDSVTS 345
                 E  ++ SSSSSSS SGS S SGS  SS SSDSE +D+DS  +
Sbjct: 301 ------ESHEQTSSSSSSSGSGSSSGSGSATSSSSSDSEASDDDSAVN 312

The following BLAST results are available for this feature:

BLAST of CmaCh15G009490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EAF_DROME	6.8e-06	30.53	Ell-associated factor Eaf OS=Drosophila melanogaster GN=Eaf PE=1 SV=1	[more]
EAF_DROSE	8.9e-06	29.66	Ell-associated factor Eaf OS=Drosophila sechellia GN=Eaf PE=3 SV=1	[more]
EAF_DROVI	8.9e-06	32.32	Ell-associated factor Eaf OS=Drosophila virilis GN=Eaf PE=3 SV=1	[more]

BLAST of CmaCh15G009490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KM56_CUCSA	3.5e-134	78.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G210030 PE=4 SV=1	[more]
W9RR55_9ROSA	2.6e-105	69.34	Uncharacterized protein OS=Morus notabilis GN=L484_025884 PE=4 SV=1	[more]
U5FYP4_POPTR	1.1e-98	63.98	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s12520g PE=4 SV=1	[more]
A9PG79_POPTR	4.1e-98	63.69	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
B9SYJ2_RICCO	1.7e-96	63.51	ELL-associated factor, putative OS=Ricinus communis GN=RCOM_1288580 PE=4 SV=1	[more]

BLAST of CmaCh15G009490 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71080.1	1.1e-67	51.70	RNA polymerase II transcription elongation factor	[more]
AT5G38050.1	3.1e-33	37.69	RNA polymerase II transcription elongation factor	[more]

BLAST of CmaCh15G009490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109657\|ref\|XP_008454810.1\|	9.2e-136	78.21	PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo]	[more]
gi\|449460892\|ref\|XP_004148178.1\|	5.0e-134	78.87	PREDICTED: ELL-associated factor 2 [Cucumis sativus]	[more]
gi\|703099881\|ref\|XP_010096766.1\|	3.8e-105	69.34	hypothetical protein L484_025884 [Morus notabilis]	[more]
gi\|645276547\|ref\|XP_008243336.1\|	2.4e-104	67.24	PREDICTED: suppressor protein SRP40 [Prunus mume]	[more]
gi\|470122646\|ref\|XP_004297351.1\|	1.6e-103	66.95	PREDICTED: ELL-associated factor 1 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019194	Tscrpt_elong_fac_Eaf_N
IPR027093	EAF_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0032783	ELL-EAF complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0032783	ELL-EAF complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G009490.1	CmaCh15G009490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019194	Transcription elognation factor Eaf, N-terminal	PFAM	PF09816	EAF	coord: 19..117 score: 6.6
IPR027093	EAF family	PANTHER	PTHR15970	FAMILY NOT NAMED	coord: 301..341 score: 3.9E-108coord: 2..282 score: 3.9E
None	No IPR available	PANTHER	PTHR15970:SF2	ELL-ASSOCIATED FACTOR EAF	coord: 2..282 score: 3.9E-108coord: 301..341 score: 3.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G009490	CmoCh15G009890	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G009490	Cp4.1LG13g03680	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G009490	Carg26351	Silver-seed gourd	carcmaB0263

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G009490	Cucumber (Chinese Long) v3	cmacucB0346
CmaCh15G009490	Cucumber (Chinese Long) v3	cmacucB0355
CmaCh15G009490	Watermelon (97103) v2	cmawmbB308
CmaCh15G009490	Watermelon (97103) v2	cmawmbB286
CmaCh15G009490	Wax gourd	cmawgoB0366
CmaCh15G009490	Wax gourd	cmawgoB0407
CmaCh15G009490	Cucurbita maxima (Rimu)	cmacmaB315
CmaCh15G009490	Cucumber (Gy14) v1	cgycmaB0775
CmaCh15G009490	Cucurbita moschata (Rifu)	cmacmoB301
CmaCh15G009490	Cucurbita moschata (Rifu)	cmacmoB293
CmaCh15G009490	Wild cucumber (PI 183967)	cmacpiB306
CmaCh15G009490	Cucumber (Chinese Long) v2	cmacuB301
CmaCh15G009490	Melon (DHL92) v3.5.1	cmameB258
CmaCh15G009490	Watermelon (Charleston Gray)	cmawcgB257
CmaCh15G009490	Watermelon (97103) v1	cmawmB270
CmaCh15G009490	Watermelon (97103) v1	cmawmB273
CmaCh15G009490	Cucurbita pepo (Zucchini)	cmacpeB310
CmaCh15G009490	Bottle gourd (USVL1VR-Ls)	cmalsiB263
CmaCh15G009490	Cucumber (Gy14) v2	cgybcmaB606
CmaCh15G009490	Cucumber (Gy14) v2	cgybcmaB611
CmaCh15G009490	Melon (DHL92) v3.6.1	cmamedB293
CmaCh15G009490	Melon (DHL92) v3.6.1	cmamedB301
CmaCh15G009490	Silver-seed gourd	carcmaB0593
CmaCh15G009490	Silver-seed gourd	carcmaB1455