CmaCh14G010800 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh14G010800
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRibosomal protein small subunit 7
LocationCma_Chr14 : 7016480 .. 7016926 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTTGATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGACTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

mRNA sequence

ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTTGATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGACTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

Coding sequence (CDS)

ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTTGATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGACTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

Protein sequence

MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLTSTNRSFAHFRWW
Homology
[Close]
BLAST of CmaCh14G010800 vs. Swiss-Prot
Match: RT07_ARATH (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 3.6e-73
Identity = 139/148 (93.92%), Postives = 143/148 (96.62%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRG AR+KRENLH L STNRSFAHFRWW
Sbjct: 121 KRGSARRKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. Swiss-Prot
Match: RT07_WHEAT (Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.9e-69
Identity = 133/148 (89.86%), Postives = 140/148 (94.59%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MG  DGEQK+LIKKLVNFRM +GKRTRVRAIVY+TFHR A+TERDVIKLMVDAVDNIKPI
Sbjct: 1   MGDFDGEQKELIKKLVNFRMIDGKRTRVRAIVYKTFHRLARTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAIRWIL AAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVVKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGI+R++RENLH L STNRSFAHFRWW
Sbjct: 121 KRGISRKRRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. Swiss-Prot
Match: RT07_BETVU (Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2)

HSP 1 Score: 259.6 bits (662), Expect = 2.1e-68
Identity = 131/148 (88.51%), Postives = 138/148 (93.24%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNF MKEGKRT+VRAIVYQTFHR A+TE DVIKLM+DAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           C+VEKV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC F EILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGI+R+KRENLH L S NRSFAHFRWW
Sbjct: 121 KRGISRKKRENLHGLASANRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. Swiss-Prot
Match: RT07_MARPO (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-43
Identity = 90/147 (61.22%), Postives = 122/147 (82.99%), Query Frame = 1 

Query: 3   GLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICE 62
           GL+G+QKQLIKKLV+  M +GK+TR RAIVY+TFHR A    DVIKL+V+A++N+KPICE
Sbjct: 85  GLNGKQKQLIKKLVHICMIDGKKTRSRAIVYKTFHRLAP-HGDVIKLLVNAIENVKPICE 144

Query: 63  VEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYR-ISLEKCSFAEILDAYRK 122
           V+KV ++GT   VP I+A +RQ+TLAIRW+LE+A KRR+  + ISL++C +AEIL+A +K
Sbjct: 145 VKKVRISGTTRLVPSIIATNRQETLAIRWMLESAAKRRMGKKSISLDQCLYAEILEASQK 204

Query: 123 RGIARQKRENLHRLTSTNRSFAHFRWW 149
            GIAR+KR++LH+L   NRSF+H+RWW
Sbjct: 205 MGIARKKRDDLHKLAEANRSFSHYRWW 230

[Close]
BLAST of CmaCh14G010800 vs. Swiss-Prot
Match: RS7_PELUB (30S ribosomal protein S7 OS=Pelagibacter ubique (strain HTCC1062) GN=rpsG PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20
Identity = 54/138 (39.13%), Postives = 85/138 (61.59%), Query Frame = 1 

Query: 11  LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PAQTERDVIKLMVDAVDNIKPICEVEKVGVA 70
           +I KL+N  M +GK+     IVY+   +  ++T+ + I +  +A++NIKP  EV    V 
Sbjct: 22  IIPKLINSIMYDGKKVVAEKIVYEAIEKIKSKTKEEPINVFNEAINNIKPTVEVRSRRVG 81

Query: 71  GTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARQKR 130
           G  Y VP  V   R Q LAIRW+++A+ KR+  +   +    F E+ DAY K+G A +KR
Sbjct: 82  GATYQVPVEVKTKRAQALAIRWLVDASRKRKDKH---MSDKIFNELYDAYEKKGSAVKKR 141

Query: 131 ENLHRLTSTNRSFAHFRW 148
           E++H++  +N++FAHFRW
Sbjct: 142 EDVHKMAESNKAFAHFRW 156

[Close]
BLAST of CmaCh14G010800 vs. TrEMBL
Match: A0A142BZ01_ZIZJJ (Ribosomal protein S7 OS=Ziziphus jujuba GN=rps7 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.6e-75
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIAR+KRENLHRL STNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. TrEMBL
Match: A0A0M4R6T5_CANSA (Ribosomal protein S7 OS=Cannabis sativa GN=rps7 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.8e-74
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIAR+KRENLHRL STNR FAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRRFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. TrEMBL
Match: D5I3F4_CUCPE (Ribosomal protein S7 OS=Cucurbita pepo GN=rps7 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 6.7e-74
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHR AQTERDVIKLMVDAVDNIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGT+YDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FAEILDAYR
Sbjct: 61  CEVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIARQKRENLHRL STNRSFAHFRWW
Sbjct: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. TrEMBL
Match: D5I3C7_CITLA (Ribosomal protein S7 OS=Citrullus lanatus GN=rps7 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.3e-73
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHR AQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIAR+KRENLHRL STNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. TrEMBL
Match: A0A0M4MPL4_9MAGN (Ribosomal protein S7 OS=Heuchera parviflora var. saurensis GN=rps7 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.3e-73
Identity = 142/148 (95.95%), Postives = 145/148 (97.97%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIAR+KRENLH L STNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. TAIR10
Match: AT2G07696.1 (AT2G07696.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 275.4 bits (703), Expect = 2.0e-74
Identity = 139/148 (93.92%), Postives = 143/148 (96.62%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRG AR+KRENLH L STNRSFAHFRWW
Sbjct: 121 KRGSARRKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. TAIR10
Match: ATMG01270.1 (ATMG01270.1 mitochondrial ribosomal protein S7)

HSP 1 Score: 275.4 bits (703), Expect = 2.0e-74
Identity = 139/148 (93.92%), Postives = 143/148 (96.62%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRG AR+KRENLH L STNRSFAHFRWW
Sbjct: 121 KRGSARRKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. TAIR10
Match: ATCG01240.1 (ATCG01240.1 ribosomal protein S7)

HSP 1 Score: 71.6 bits (174), Expect = 4.5e-13
Identity = 45/143 (31.47%), Postives = 81/143 (56.64%), Query Frame = 1 

Query: 8   QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVDNIKPICEVEKV 67
           + +L+  LVN  +K GK++    I+Y+   +  Q TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 68  GVAGTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRISLEKCSFAEILDAYRKRG 127
            V G+ + VP  +   + + LAIRW+L A+ KR    +++++S      +E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

Query: 128 IARQKRENLHRLTSTNRSFAHFR 147
            A +K+E  HR+   NR+FAHFR
Sbjct: 139 DAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh14G010800 vs. TAIR10
Match: ATCG00900.1 (ATCG00900.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 71.6 bits (174), Expect = 4.5e-13
Identity = 45/143 (31.47%), Postives = 81/143 (56.64%), Query Frame = 1 

Query: 8   QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVDNIKPICEVEKV 67
           + +L+  LVN  +K GK++    I+Y+   +  Q TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 68  GVAGTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRISLEKCSFAEILDAYRKRG 127
            V G+ + VP  +   + + LAIRW+L A+ KR    +++++S      +E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

Query: 128 IARQKRENLHRLTSTNRSFAHFR 147
            A +K+E  HR+   NR+FAHFR
Sbjct: 139 DAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh14G010800 vs. NCBI nr
Match: gi|1016470801|ref|YP_009241662.1| (ribosomal protein S7 (mitochondrion) [Ziziphus jujuba])

HSP 1 Score: 288.5 bits (737), Expect = 6.6e-75
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIAR+KRENLHRL STNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. NCBI nr
Match: gi|1016880331|ref|YP_009243658.1| (ribosomal protein S7 (mitochondrion) [Cannabis sativa])

HSP 1 Score: 286.6 bits (732), Expect = 2.5e-74
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIAR+KRENLHRL STNR FAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRRFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. NCBI nr
Match: gi|295311708|ref|YP_003587368.1| (ribosomal protein S7 [Cucurbita pepo])

HSP 1 Score: 284.6 bits (727), Expect = 9.6e-74
Identity = 144/148 (97.30%), Postives = 145/148 (97.97%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHR AQTERDVIKLMVDAVDNIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGT+YDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FAEILDAYR
Sbjct: 61  CEVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIARQKRENLHRL STNRSFAHFRWW
Sbjct: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. NCBI nr
Match: gi|295311664|ref|YP_003587257.1| (ribosomal protein S7 [Citrullus lanatus])

HSP 1 Score: 282.3 bits (721), Expect = 4.7e-73
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHR AQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIAR+KRENLHRL STNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh14G010800 vs. NCBI nr
Match: gi|927682212|gb|ALE29224.1| (ribosomal protein S7 (mitochondrion) [Heuchera parviflora var. saurensis])

HSP 1 Score: 282.0 bits (720), Expect = 6.2e-73
Identity = 142/148 (95.95%), Postives = 145/148 (97.97%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLTSTNRSFAHFRWW 149
           KRGIAR+KRENLH L STNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHGLASTNRSFAHFRWW 148

The following BLAST results are available for this feature:
BLAST of CmaCh14G010800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RT07_ARATH3.6e-7393.92Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1[more]
RT07_WHEAT1.9e-6989.86Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1[more]
RT07_BETVU2.1e-6888.51Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2[more]
RT07_MARPO1.3e-4361.22Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2[more]
RS7_PELUB1.6e-2039.1330S ribosomal protein S7 OS=Pelagibacter ubique (strain HTCC1062) GN=rpsG PE=3 S... [more]
BLAST of CmaCh14G010800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A142BZ01_ZIZJJ4.6e-7597.97Ribosomal protein S7 OS=Ziziphus jujuba GN=rps7 PE=4 SV=1[more]
A0A0M4R6T5_CANSA1.8e-7497.30Ribosomal protein S7 OS=Cannabis sativa GN=rps7 PE=4 SV=1[more]
D5I3F4_CUCPE6.7e-7497.30Ribosomal protein S7 OS=Cucurbita pepo GN=rps7 PE=4 SV=1[more]
D5I3C7_CITLA3.3e-7396.62Ribosomal protein S7 OS=Citrullus lanatus GN=rps7 PE=4 SV=1[more]
A0A0M4MPL4_9MAGN4.3e-7395.95Ribosomal protein S7 OS=Heuchera parviflora var. saurensis GN=rps7 PE=4 SV=1[more]
BLAST of CmaCh14G010800 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07696.12.0e-7493.92 Ribosomal protein S7p/S5e family protein[more]
ATMG01270.12.0e-7493.92ATMG01270.1 mitochondrial ribosomal protein S7[more]
ATCG01240.14.5e-1331.47ATCG01240.1 ribosomal protein S7[more]
ATCG00900.14.5e-1331.47ATCG00900.1 Ribosomal protein S7p/S5e family protein[more]
BLAST of CmaCh14G010800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1016470801|ref|YP_009241662.1|6.6e-7597.97ribosomal protein S7 (mitochondrion) [Ziziphus jujuba][more]
gi|1016880331|ref|YP_009243658.1|2.5e-7497.30ribosomal protein S7 (mitochondrion) [Cannabis sativa][more]
gi|295311708|ref|YP_003587368.1|9.6e-7497.30ribosomal protein S7 [Cucurbita pepo][more]
gi|295311664|ref|YP_003587257.1|4.7e-7396.62ribosomal protein S7 [Citrullus lanatus][more]
gi|927682212|gb|ALE29224.1|6.2e-7395.95ribosomal protein S7 (mitochondrion) [Heuchera parviflora var. saurensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR005717Ribosomal_S7_bac/org-type
IPR023798Ribosomal_S7_dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G010800.1CmaCh14G010800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 3..148
score: 4.1
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 10..147
score: 1.3E
IPR005717Ribosomal protein S7, bacterial/organellar-typeTIGRFAMsTIGR01029TIGR01029coord: 7..147
score: 2.4
IPR023798Ribosomal protein S7 domainGENE3DG3DSA:1.10.455.10coord: 7..147
score: 2.0
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 8..140
score: 2.1
IPR023798Ribosomal protein S7 domainunknownSSF47973Ribosomal protein S7coord: 9..147
score: 1.16
NoneNo IPR availablePANTHERPTHR11205:SF23RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 10..147
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh14G010800Silver-seed gourdcarcmaB0383
CmaCh14G010800Cucumber (Chinese Long) v3cmacucB0293
CmaCh14G010800Watermelon (97103) v2cmawmbB248
CmaCh14G010800Wax gourdcmawgoB0289
CmaCh14G010800Cucurbita maxima (Rimu)cmacmaB288
CmaCh14G010800Cucumber (Gy14) v1cgycmaB0930
CmaCh14G010800Cucurbita moschata (Rifu)cmacmoB273
CmaCh14G010800Wild cucumber (PI 183967)cmacpiB257
CmaCh14G010800Cucumber (Chinese Long) v2cmacuB255
CmaCh14G010800Melon (DHL92) v3.5.1cmameB226
CmaCh14G010800Watermelon (Charleston Gray)cmawcgB221
CmaCh14G010800Watermelon (97103) v1cmawmB227
CmaCh14G010800Cucurbita pepo (Zucchini)cmacpeB283
CmaCh14G010800Cucurbita pepo (Zucchini)cmacpeB293
CmaCh14G010800Bottle gourd (USVL1VR-Ls)cmalsiB240
CmaCh14G010800Cucumber (Gy14) v2cgybcmaB320
CmaCh14G010800Melon (DHL92) v3.6.1cmamedB257