CmaCh12G005440 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCATTAAGATCCCAATTGCGGATGTCGAGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTTAGCATCAGTGAGCTCACCCACGCCTTCGGCTTCTTAGGCAATATTCTTCCATACTACAAAGCTCACTATGGTCTCACTTATGCTGACTATGATTGTAATGGCTTTATCACTGAAGATGAGCTTGATAGGCTTGTTGACTATGCCATGAGGTTTCACTCCCCCAAGTGTTGTAACCATGGTAGATCCATCGTGTAA ATGGCGCCATTAAGATCCCAATTGCGGATGTCGAGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTTAGCATCAGTGAGCTCACCCACGCCTTCGGCTTCTTAGGCAATATTCTTCCATACTACAAAGCTCACTATGGTCTCACTTATGCTGACTATGATTGTAATGGCTTTATCACTGAAGATGAGCTTGATAGGCTTGTTGACTATGCCATGAGGTTTCACTCCCCCAAGTGTTGTAACCATGGTAGATCCATCGTGTAA ATGGCGCCATTAAGATCCCAATTGCGGATGTCGAGGGAGGAGATGAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTTAGCATCAGTGAGCTCACCCACGCCTTCGGCTTCTTAGGCAATATTCTTCCATACTACAAAGCTCACTATGGTCTCACTTATGCTGACTATGATTGTAATGGCTTTATCACTGAAGATGAGCTTGATAGGCTTGTTGACTATGCCATGAGGTTTCACTCCCCCAAGTGTTGTAACCATGGTAGATCCATCGTGTAA MAPLRSQLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLTYADYDCNGFITEDELDRLVDYAMRFHSPKCCNHGRSIV
BLAST of CmaCh12G005440 vs. TrEMBL
Match: A0A0A0LRC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G358870 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.3e-22 Identity = 52/87 (59.77%), Postives = 71/87 (81.61%), Query Frame = 1
BLAST of CmaCh12G005440 vs. TrEMBL
Match: A0A0A0LKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.3e-22 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1
BLAST of CmaCh12G005440 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.8e-17 Identity = 42/80 (52.50%), Postives = 62/80 (77.50%), Query Frame = 1
BLAST of CmaCh12G005440 vs. TrEMBL
Match: A0A0A0LNG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G357860 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-15 Identity = 45/110 (40.91%), Postives = 70/110 (63.64%), Query Frame = 1
BLAST of CmaCh12G005440 vs. TrEMBL
Match: A0A0A0LKW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G358860 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-15 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 1
BLAST of CmaCh12G005440 vs. NCBI nr
Match: gi|700207397|gb|KGN62516.1| (hypothetical protein Csa_2G358870 [Cucumis sativus]) HSP 1 Score: 113.6 bits (283), Expect = 1.9e-22 Identity = 52/87 (59.77%), Postives = 71/87 (81.61%), Query Frame = 1
BLAST of CmaCh12G005440 vs. NCBI nr
Match: gi|700207406|gb|KGN62525.1| (hypothetical protein Csa_2G359940 [Cucumis sativus]) HSP 1 Score: 113.6 bits (283), Expect = 1.9e-22 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 1
BLAST of CmaCh12G005440 vs. NCBI nr
Match: gi|449470198|ref|XP_004152805.1| (PREDICTED: probable calcium-binding protein CML10 [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 3.2e-22 Identity = 51/82 (62.20%), Postives = 69/82 (84.15%), Query Frame = 1
BLAST of CmaCh12G005440 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus]) HSP 1 Score: 95.9 bits (237), Expect = 4.0e-17 Identity = 42/80 (52.50%), Postives = 62/80 (77.50%), Query Frame = 1
BLAST of CmaCh12G005440 vs. NCBI nr
Match: gi|700207395|gb|KGN62514.1| (hypothetical protein Csa_2G357860 [Cucumis sativus]) HSP 1 Score: 90.5 bits (223), Expect = 1.7e-15 Identity = 45/110 (40.91%), Postives = 70/110 (63.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |